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JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics

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07:28 min

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October 19th, 2021

DOI :

10.3791/62796-v

October 19th, 2021

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2,825 Views

David Vanderwall¹, Poudel Suresh^1,2, Yingxue Fu², Ji-Hoon Cho², Timothy I. Shaw^2,3, Ashutosh Mishra², Anthony A. High², Junmin Peng^1,2, Yuxin Li^1,2

¹Departments of Structural Biology and Developmental Neurobiology, St. Jude Children’s Research Hospital, ²Center for Proteomics and Metabolomics, St. Jude Children’s Research Hospital, ³Department of Computational Biology, St. Jude Children’s Research Hospital

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Keywords Protein Co expression

Network Analysis

Co expression Clustering

Pathway Enrichment

PPI Module Detection

User friendly Interface

Interactive Visualization

Phosphoproteomics

Interactome Data

WGCNA Algorithm

Co expression Patterns

Pathway Ontology Enrichment Heatmap

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