The work was funded by a grant from the National Institute of General Medical Sciences (GM096972).

1. Preparation of Hypothalamic Brain Slices
<ol>
	<li>Obtain, in advance, Institutional Animal Care and Use Committee (IACUC) approval for any procedure involving animals. The animal procedures described here are consistent with the AVMA Guidelines for the Euthanasia of Animals 2013 and were approved in advance by the Oregon Health &#38; Science University IACUC.</li>
	<li>Prepare 500 ml of the slicing buffer without the MgCl2 and CaCl2 (Table 1). Bubble the solution with 95% O2 and 5% CO2 at room temperature then add the MgCl2 and CaCl2 while continuing to aerate. Adjust the osmolarity to 300 mOsm with sucrose. The osmolarity is measured with a vapor pressure osmometer.</li>
	<li>Prepare 1 L of the recording media without the MgCl2 and CaCl2 (Table 2). Bubble the solution with 95% O2 and 5% CO2 then add the MgCl2 and CaCl2 while continuing to aerate. Adjust the pH to 7.2-7.4 with NaOH (10 N) and the osmolarity to 300 mOsm with sucrose. The addition of HEPES buffer is optional and was used to further stabilize pH.</li>
	<li>The slicing and recording solutions may be stored in the refrigerator for several days prior to use.</li>
	<li>Prepare 3% agarose and pour into a sterile Petri dish (6 mm deep) and refrigerate.</li>
	<li>Cut three cubes of agarose about 6 mm x 6 mm x 6 mm.</li>
	<li>Deeply anesthetize a four to eight week old Sprague-Dawley rat with isoflurane. Test for the depth of anesthesia. The depth of anesthesia is deemed appropriate when there is no withdrawal reflex of the hind limb following pinching of the footpad. Once appropriately anesthetized, the rat is euthanized by rapid decapitation.&#160;</li>
	<li>Rapidly remove the brain being careful to cut the optic nerves first, and place in ice-cold slicing solution saturated with 5% CO2 and 95% O2 and allow to cool for 2-3 min.</li>
	<li>Trim the brain. Place the brain using forceps on a moistened (with slicing solution) circular filter paper set on a glass Petri dish resting on ice.</li>
	<li>Cut the brain coronally to remove the remaining cerebellum and brain stem, then the rostral cortex and the sides, to leave a block of brain containing the hypothalamus carefully preserving the side containing SCN, optic nerves, and optic chiasm.</li>
	<li>Spread a thin layer of cyanoacrylic glue large enough to attach the brain and agarose blocks in an ice-cold but dry microtome-slicing chamber.</li>
	<li>Transfer the ice-cold brain block caudal side down onto the glue with the side containing the SCN positioned for cutting first with the optic nerves forming a &#34;V&#34; pointing up.</li>
	<li>Place the agarose blocks on the other 3 sides. Fill the chamber with ice-cold slicing buffer continuously bubbled with 5% CO2 and 95% O2. The cyanoacrylic glue will solidify with moisture holding the brain and agarose blocks in place.</li>
	<li>Cut coronal hypothalamic slices (220-250 &#181;m thick) containing the SCN with the vibrating blade microtome. Typically a slice is chosen where the optic chiasm is about 2-4 mm across, appearing like a white band with SCN just dorsal appearing as two small &#8220;indentations&#8221; in the optic chiasm on either side of the 3rd ventricle (Figure 1A).</li>
	<li>Place the slices in the recording chamber (36 &#176;C) mounted on the stage of a Leica DMLFS microscope. The chamber is filled with continuously flowing recording solution (2 ml/min) aerated with 95% O2 and 5% CO2 and preheated with an inline heater.</li>
	<li>Perform whole-cell patch clamp and calcium imaging recordings in SCN neurons 0.5-8 hr after slice preparation.</li>
</ol>
2. Patch Clamp Recording
<ol>
	<li>Prepare the electrode solution (intracellular) solution in half the total final volume of water.</li>
	<li>Adjust the solution to pH 7.3 with KOH (1 N).</li>
	<li>Add the remaining water. The final osmolarity of the solution should be in the range of 280-290 mOsm.</li>
	<li>Pass the electrode solution through a 0.2 &#181;m filter, aliquot (0.5 ml) into microfuge tubes, and store at -20 &#176;C.</li>
	<li>Prepare the calcium probe bis-fura-2 hexapotassium salt stock solution (10 mM) by mixing 1 mg bis-fura-2 hexapotassium salt with 99.29 &#181;l of 0.2 &#181;m filtered water.</li>
	<li>Aliquot into separate tubes (2-5 &#181;l each) and freeze (-20 &#176;C).</li>
	<li>Thaw an aliquot of internal solution and the Ca2+ probe shortly before use. Add 2 &#181;l of the bis-fura-2 stock solution to 400 &#181;l of the internal solution for a final 50 &#181;M calcium probe concentration. Briefly triturate to mix the solutions. The calcium probe concentration (10-250 &#181;M) varies depending on experimental design and imaging system. Note that bis-fura-2 is comprised of two linked fura-2 molecules.</li>
	<li>Pull whole-cell patch electrodes, in two stages to an outside tip diameter of approximately 1 &#181;m and resistances of 7-10 M&#937; when filled with the intracellular solution.</li>
	<li>Backfill the electrode with a few &#181;l of the internal solution containing the calcium probe filtered with a 4 mm syringe filter (0.2 &#181;m) for low volume samples via a Microfil tube.</li>
	<li>Apply a small amount of positive pressure to the electrode as it is guided into the recording chamber under red light illumination while being viewed on a video monitor.&#160;</li>
	<li>Place the microelectrode over the SCN using a low power objective (4X). The SCN is identified as the two translucent areas on either side of the third ventricle and dorsal to the optic chiasm (Figure 1A).</li>
	<li>Switch the microscope to a high power magnification (40X or 63X). Subregions of the SCN and individual SCN neurons can be targeted for recording at the higher magnification.</li>
	<li>Apply gentle positive pressure to the microelectrode as it is advanced onto the surface of a neuron.</li>
	<li>Apply gentle negative pressure to the microelectrode to form a seal with resistances of 3-10 G&#937;.</li>
	<li>Adjust the membrane voltage to -60 mV with the amplifier controlled with acquisition software.</li>
	<li>Apply additional negative pressure to the electrode to rupture the cell membrane to whole cell mode.</li>
	<li>Upon entering whole cell mode the SCN neuron soma and dendrites fill with fluorescent probe.</li>
	<li>Membrane voltage is measured in current-clamp mode or current in voltage-clamp mode while the calcium probe image data is being monitored and stored (described below). View acquired images along with a graph of 340 nm/380 nm ratio fluorescence data during the experiment.</li>
</ol>
3. Measurement of Intracellular Ca2+
<ol>
	<li>Quantitative Ca2+ measurements are obtained by recording a pair of images by rapidly exciting the tissue with UV light at 340 nm and 380 nm via a monochronometer with a 10 nm bandwidth and passed through a UG11 optical filter to restrict harmonic wavelengths above 400 nm, a 400 nm DCLP dichroic and emitted light through a 510&#177;40 nm emission filter.</li>
	<li>The images are acquired using a cooled CCD camera with acquisition time and binning adjusted to minimize photobleaching and maximize recording speed.</li>
	<li>Quantitative imaging software is used to acquire and display the images.</li>
	<li>Select regions of interest from the initial image to be converted to relative fluorescence intensity unit data (i.e.&#160;soma, dendrite,&#160;etc.). Also select a region for measurement of the background fluorescence (Figure 1B).</li>
	<li>Raw images and quantified optical data are continually saved during the experiment. After the experiment the saved images are generally reanalyzed when more time can be taken to select more accurately the regions of interest to be quantified.</li>
	<li>The data can be presented as the estimated intracellular calcium concentration (Est[Ca2+]i). The ratio (R) of emitted light following excitation and background subtraction at 340 nm divided by 380 nm along with the maximum and minimum fluorescence at 340 nm and 380 nm is used to calculate the calcium concentration4. Background subtraction and other calculations are performed using data analysis software.</li>
	<li>An in&#160;vitro determination of maximum and minimum bis-fura-2 fluorescence can be performed using 10 mM CaCl2 for Ca2+ bound and 10 mM EGTA for Ca2+ free conditions. The Ca2+ disassociation constant, Kd of the probe is taken to be 370 nM for bis-fura-2 (Invitrogen).</li>
</ol>

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The authors declare that they have no competing financial interests.

The methods described above provide a powerful tool to simultaneously record the link between neuron membrane electrical activity and the intracellular calcium concentration. The method has a number of strengths in that it combines two very well characterized methods - whole cell patch clamp recording and measurement of intracellular calcium using fluorescent dyes. Our approach is similar to those described by other investigators6,23.
A number of items must be taken into ...

Changes in gene expression are known to occur in neurons as a consequence of synaptic signaling. Signaling by the excitatory neurotransmitter glutamate can depolarize the neuronal membrane potential eventually leading to gene transcription and translation1,2. Activation of ionotropic receptors by glutamate allows extracellular calcium ions to enter the cell, which is thought to play a critical role as a second messenger in activating gene transcription. Evaluating the relationship between membrane electrical activity, such as action potential firing frequency, and changes of intracellular calcium concentration requires the combination of two methods - whole cell patch clamping and quantitative imaging of fluorescent calcium probes3-5, allowing the relationship to be studied in individual neurons. The single cell recording technique allows the recording of the activity of individual neurons in identifiable portions of the brain. The whole cell recording technique allows the membrane voltage or current to be controlled allowing for experimental manipulation of specific ion channel currents. Using micropipettes filled with fluorescent calcium probes also ensures that the neuron is well filled with calcium probe. This technique has a clear advantage when working with brain slice preparations from adult slice preparations, since these neurons are particularly difficult to load using the more common cell permeant probes and reduces potential background fluorescence issues6-8.
Light is the principal way mammals adjust their circadian clock, which is located in the hypothalamic suprachiasmatic nucleus (SCN). Light information transduced in the retina is transmitted 9-11 via the retinohypothalamic tract (RHT) where glutamate is released in the SCN12,13. Glutamate opens NMDA and AMPA ionotropic receptors located on SCN neurons producing an influx of calcium and sodium, and initiating an intracellular signaling cascade that ultimately leads to altering the expression of a family of clock genes14-17 and shifts in phase of the circadian clock18-20. However, calcium can enter neurons either directly through ionotropic glutamate receptors or through membrane depolarization and activation of voltage-dependent calcium channels (VDCC)21. We therefore developed an experimental protocol to investigate the relationship between the intracellular calcium concentration and membrane electrical activity in SCN neurons, such as occurs with action potential firing and from synaptic input22.

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	<colgroup>
		<col span="4" />
	</colgroup>
	<tbody>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">NaCl</td>
			<td style="width:123px;">Fisher Scientific Co.</td>
			<td style="width:123px;">S271-3</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">KCl</td>
			<td style="width:123px;">Fisher Scientific Co.</td>
			<td style="width:123px;">P217-500</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="37">
			<td height="37" style="height:37px;width:123px;">NaH2PO4&#8226;H2O</td>
			<td style="width:123px;">Sigma Chemical Co.</td>
			<td style="width:123px;">S-9638</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="37">
			<td height="37" style="height:37px;width:123px;">MgCl2&#8226;6H2O</td>
			<td style="width:123px;">Fisher Scientific Co.</td>
			<td style="width:123px;">M33-500</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="37">
			<td height="37" style="height:37px;width:123px;">CaCl2&#8226;2H2O</td>
			<td style="width:123px;">Fisher Scientific Co.</td>
			<td style="width:123px;">C79-500</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">D-glucose</td>
			<td style="width:123px;">Fisher Scientific Co.</td>
			<td style="width:123px;">D16-500</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">NaHCO3</td>
			<td style="width:123px;">Fisher Scientific Co.</td>
			<td style="width:123px;">S233-500</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">Sucrose</td>
			<td style="width:123px;">Fisher Scientific Co.</td>
			<td style="width:123px;">S5-500</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="48">
			<td height="48" style="height:48px;width:123px;">Potassium D-gluconate</td>
			<td style="width:123px;">Sigma-Aldrich</td>
			<td style="width:123px;">G4500</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">HEPES</td>
			<td style="width:123px;">Sigma-Aldrich</td>
			<td style="width:123px;">H4034</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="66">
			<td height="86" rowspan="2" style="height:87px;width:123px;">Adenosine 5&#8242;-triphosphate dipotassium salt dihydrate</td>
			<td style="width:123px;">Sigma-Aldrich</td>
			<td style="width:123px;">A8937</td>
			<td rowspan="2" style="width:123px;"></td>
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		<tr height="20">
			<td height="20" style="height:20px;width:123px;"></td>
			<td style="width:123px;"></td>
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		<tr height="53">
			<td height="53" style="height:53px;width:123px;">Guanosine 5&#8242;-triphosphate tris salt</td>
			<td style="width:123px;">Sigma-Aldrich</td>
			<td style="width:123px;">G9002</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="62">
			<td height="62" style="height:63px;width:123px;">Agarose (ultrapure)</td>
			<td style="width:123px;">Life Technologies</td>
			<td style="width:123px;">15510-027</td>
			<td style="width:123px;">Gel pored into sterile Petri dish 6 mm thick layer</td>
		</tr>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">KOH</td>
			<td style="width:123px;">Sigma-Aldrich</td>
			<td style="width:123px;">P-6310</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">NaOH</td>
			<td style="width:123px;">Sigma-Aldrich</td>
			<td style="width:123px;">S-5881</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="64">
			<td height="64" style="height:64px;width:123px;">Bis-fura-2, hexapotassium salt</td>
			<td style="width:123px;">Invitrogen</td>
			<td style="width:123px;">B6810</td>
			<td style="width:123px;">Cell impermeant</td>
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		<tr height="21">
			<td height="21" style="height:21px;"></td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr height="17">
			<td height="17" style="height:17px;"></td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr height="17">
			<td height="17" style="height:17px;"></td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr height="22">
			<td height="22" style="height:22px;"></td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:123px;">Name of Equipment</td>
			<td style="width:123px;">Company</td>
			<td style="width:123px;">Catalog Number</td>
			<td style="width:123px;">Comments</td>
		</tr>
		<tr height="37">
			<td height="37" style="height:37px;width:123px;">Microtome</td>
			<td style="width:123px;">Leica</td>
			<td style="width:123px;">VT1000S</td>
			<td style="width:123px;">Tissue slicing</td>
		</tr>
		<tr height="21">
			<td height="50" rowspan="2" style="height:51px;width:123px;">Cyanoacrylic glue (Roti-Coll1)</td>
			<td rowspan="2" style="width:123px;">Carl Roth GmbH+Co</td>
			<td rowspan="2" style="width:123px;">Art-Nr. 0258.1</td>
			<td rowspan="2" style="width:123px;"></td>
		</tr>
		<tr height="29">
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		<tr height="48">
			<td height="48" style="height:48px;width:123px;">Microelectrode puller</td>
			<td style="width:123px;">Narshige International USA</td>
			<td style="width:123px;">PP-83</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="45">
			<td height="45" style="height:45px;width:123px;">Microelectrode Capillary Tubes</td>
			<td style="width:123px;">World Precision Instruments</td>
			<td style="width:123px;">1B150F-4</td>
			<td style="width:123px;"></td>
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		<tr height="45">
			<td height="45" style="height:45px;width:123px;">Microfil 34 g</td>
			<td style="width:123px;">World Precision Instruments</td>
			<td style="width:123px;">MF34G-5</td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">Syringe filter</td>
			<td style="width:123px;">Corning</td>
			<td style="width:123px;">#431212</td>
			<td style="width:123px;"></td>
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		<tr height="38">
			<td height="38" style="height:39px;width:123px;">Microscope</td>
			<td style="width:123px;">Leica</td>
			<td style="width:123px;">DM LFS</td>
			<td style="width:123px;">With 4X, 40X UV and 63X UV objectives, and epifluorescence</td>
		</tr>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">CCD Camera</td>
			<td style="width:123px;">Hamamatsu</td>
			<td style="width:123px;">ORCA ER</td>
			<td style="width:123px;">12 bit CCD</td>
		</tr>
		<tr height="37">
			<td height="37" style="height:37px;width:123px;">Fura-2 Filter Cube</td>
			<td style="width:123px;">Chroma</td>
			<td style="width:123px;">71500A</td>
			<td style="width:123px;">Set with UG11 filter</td>
		</tr>
		<tr height="37">
			<td height="37" style="height:37px;width:123px;">Polychrome IV</td>
			<td style="width:123px;">Till Photonics GmBH</td>
			<td style="width:123px;"></td>
			<td style="width:123px;">Monochronometer</td>
		</tr>
		<tr height="38">
			<td height="55" rowspan="2" style="height:56px;width:123px;">Ultraviolet blocking safety glasses</td>
			<td rowspan="2" style="width:123px;">Ultra-Violet Products</td>
			<td rowspan="2" style="width:123px;"></td>
			<td rowspan="2" style="width:123px;"></td>
		</tr>
		<tr height="17">
		</tr>
		<tr height="34">
			<td height="34" style="height:35px;width:123px;">EPC-9 amplifier</td>
			<td style="width:123px;">HEKA Eletronik</td>
			<td style="width:123px;"></td>
			<td style="width:123px;"></td>
		</tr>
		<tr height="38">
			<td height="38" style="height:39px;width:123px;">Metafluor</td>
			<td style="width:123px;">Molecular Devices</td>
			<td style="width:123px;"></td>
			<td style="width:123px;">Imaging Software</td>
		</tr>
		<tr height="43">
			<td height="43" style="height:43px;width:123px;">Patchmaster</td>
			<td style="width:123px;">HEKA Eletronik</td>
			<td style="width:123px;"></td>
			<td style="width:123px;">Data Acquisition Software</td>
		</tr>
		<tr height="52">
			<td height="52" style="height:52px;width:123px;">Igor version 6</td>
			<td style="width:123px;">Wavemetrics</td>
			<td style="width:123px;"></td>
			<td style="width:123px;">Electrophysiology &#38; Ca2+ Data Analysis</td>
		</tr>
		<tr height="45">
			<td height="45" style="height:45px;width:123px;">VAPRO 5520</td>
			<td style="width:123px;">Westcor</td>
			<td style="width:123px;"></td>
			<td style="width:123px;">Vapor pressure osmometer</td>
		</tr>
	</tbody>
</table>

simultaneous electrophysiological recording and calcium imaging of suprachiasmatic nucleus neurons

Simultaneous electrophysiological and fluorescent imaging recording methods were used to study the role of changes of membrane potential or current in regulating the intracellular calcium concentration. Changing environmental conditions, such as the light-dark cycle, can modify neuronal and neural network activity and the expression of a family of circadian clock genes within the suprachiasmatic nucleus (SCN), the location of the master circadian clock in the mammalian brain. Excitatory synaptic transmission leads to an increase in the postsynaptic Ca2+ concentration that is believed to activate the signaling pathways that shifts the rhythmic expression of circadian clock genes. Hypothalamic slices containing the SCN were patch clamped using microelectrodes filled with an internal solution containing the calcium indicator bis-fura-2. After a seal was formed between the microelectrode and the SCN neuronal membrane, the membrane was ruptured using gentle suction and the calcium probe diffused into the neuron filling both the soma and dendrites. Quantitative ratiometric measurements of the intracellular calcium concentration were recorded simultaneously with membrane potential or current. Using these methods it is possible to study the role of changes of the intracellular calcium concentration produced by synaptic activity and action potential firing of individual neurons. In this presentation we demonstrate the methods to simultaneously record electrophysiological activity along with intracellular calcium from individual SCN neurons maintained in brain slices.

Using hypothalamic brain slices, we simultaneously recorded changes in intracellular calcium in whole cell mode under both voltage and current clamp conditions. The microelectrode shown in Figure 1A is lowered into position under high magnification (40X&#160;or 63X&#160;UV objectives) with a small amount of applied positive pressure. After touching the neuron, a gigaohm seal is formed with gentle suction. In voltage-clamp mode after setting the cell membrane potential to -60 mV, additional suction breaks...

Watch this Scientific Journal Video about Simultaneous Electrophysiological Recording and Calcium Imaging of Suprachiasmatic Nucleus Neurons at JoVE.com

Simultaneous Electrophysiological Recording and Calcium Imaging of Suprachiasmatic Nucleus Neurons

Procedures are described to perform simultaneous recordings of membrane potential or current and changes of intracellular calcium concentration. Suprachiasmatic nucleus neurons are filled with the calcium indicator bis-fura-2 using a patch clamp electrode in the whole cell patch clamp configuration.

Simultaneous electrophysiological and fluorescent imaging recording methods were used to study the role of changes of membrane potential or current in ...

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10.8K Views.  Oregon Health & Science University. Procedures are described to perform simultaneous recordings of membrane potential or current and changes of intracellular calcium concentration. Suprachiasmatic nucleus neurons are filled with the calcium indicator bis-fura-2 using a patch clamp electrode in the whole cell patch clamp configuration.