Published: November 10th, 2016
Peptide adsorption to plasticware during traditional tip-based serial dilutions can significantly impact potency determination and confound the understanding of structure-activity relationships used for lead identification and lead optimization phases of drug discovery. Here methods for automated acoustic non-contact serial dilution of peptide samples are described.
As with small molecule drug discovery, screening for peptide agonists requires the serial dilution of peptides to produce concentration-response curves. Screening peptides affords an additional layer of complexity as conventional tip-based sample handling methods expose peptides to a large surface area of plasticware, providing an increased opportunity for peptide loss via adsorption. Preventing excessive exposure to plasticware reduces peptide loss via adherence to plastics and thus minimizes inaccuracies in potency prediction, and we have previously described the benefits of non-contact acoustic dispensing for in vitro high-throughput screening of peptide agonists1. Here we discuss a fully integrated automation solution for non-contact acoustic preparation of peptide serial dilutions in microtiter plates utilizing the example of screening for peptide agonists at the mouse glucagon-like peptide-1 receptor (GLP-1R). Our methods allow for high-throughput cell-based assays to screen for agonists and are easily scalable to support increased sample throughput, or to allow for increased numbers of assay plate copies (e.g., for a panel of more target cell lines).
The GLP-1R is an established drug target in the treatment of type 2 diabetes2. The native peptide agonist for this receptor, GLP-1, has an in vivo half-life of 2-3 min3. The binding of GLP-1 to its G protein coupled target receptor results in the downstream production of the second messenger cAMP through native G protein coupling to the activation of adenylyl cyclase. Measurement of the accumulated cAMP provides a robust assay to monitor receptor activation and to screen for active GLP-1 analogues with preferred physicochemical properties. Such an assay requires the serial dilution of test samples to construct concentration-response curv....
1. Peptide Serial Dilution
We routinely use a two-step method to dilute peptides via acoustic transfer. For the first step, an acoustic dispenser aligned with automation is used to create four stock peptide intermediate dilutions across two source plates (Figure 1a, b). For the second step, we use an acoustic dispenser to further dilute stock dilutions from source plates A and B to create an 11-point concentration range for each test peptide (Figure 1c). Each pepti.......
This protocol describes the successful application of automated acoustic dispensing to serially dilute peptide samples over a concentration range of 3 x 106 requiring less than 1 µl of sample. The major advantage of this method is to increase data quality through minimizing peptide adsorption to plasticware via reduced exposure of samples to experimental containers and plasticware (such as pipette tips) that are normally required for reagent transfer and mixing. While acoustic dispensing does not complete.......
|Hanks’ Balanced Salt solution
|Bovine Serum Albumin
|Prepared as a 0.5 M stock in DMSO
|GLP-1 (7-36) amide
|Prepared as a 1 mg/ml stock in PBS, referred to as '100X reference control'
|Produced in-house at MedImmune
|Supplied at various concentrations in DMSO or PBS as appropriate
|100X peptide stock
|Produced in-house at MedImmune
|Test peptide diluted into assay buffer to 100X final required concentration
|Trypan Blue Solution, 0.4%
|Thermo Fisher Scientific
|Cedex XS Cell Analyzer
|Corning 384 well plates, low volume
|Echo Qualified 384-Well Polypropylene Microplate
|Echo Qualified Reservoir
|Echo 550 Liquid Handler
|Droplet transfer volumes in increments of 2.5 nl
|Echo 525 Liquid Handler
|Droplet transfer volumes in increments of 25 nl
|ACell Benchtop Automation
|Cellario Lab Automation Scheduling software for Life Science Robotics
|MultidropCombi Reagent Dispenser
|Referred to as 'bulk reagent dispenser'
|HTRF cAMP Dynamic 2 kit
|EnVision Multilabel Reader
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