Sign In

A subscription to JoVE is required to view this content. Sign in or start your free trial.

In This Article

  • Summary
  • Abstract
  • Introduction
  • Protocol
  • Representative Results
  • Discussion
  • Acknowledgements
  • Materials
  • References
  • Reprints and Permissions

Summary

The present protocol describes the method for analyzing intestinal flora using Illumina-based 16S rRNA gene sequencing and provides a framework for evaluating the effectiveness of herbal decoctions.

Abstract

In order to preliminarily explore the effects of Desmodium caudatum on gastritis and intestinal flora in rats, a chronic gastritis rat model was established using the classic sodium salicylate method. Eighteen SPF rats were divided into three groups: the control group (Group C), the model group (Group M), and the treatment group (Group T). Pathological sections of the gastric wall were taken from rats in each group. Furthermore, the concentrations of gastrin and malondialdehyde in the serum of rats in each group were determined by ELISA. Additionally, the effects of D. caudatum on the intestinal flora of rats with gastritis were explored through a detailed comparison of gut bacterial communities in the three groups, employing Illumina-based 16S rRNA gene sequencing. The results indicated that D. caudatum decoction could reduce the malondialdehyde content and increase the gastrin content. Moreover, D. caudatum decoction was found to enhance the diversity and abundance of intestinal flora, exerting a positive impact on the treatment of gastritis by regulating and restoring the intestinal flora.

Introduction

Chronic gastritis (CG), one of the most common clinical diseases, is characterized by chronic and persistent inflammatory changes in the gastric mucosa epithelium, which is frequently and repeatedly attacked by various pathogenic factors1. The incidence rate of CG ranks first among all types of stomach diseases, accounting for 40% to 60% of the outpatient service rate in the Department of Gastroenterology2. Moreover, the incidence rate generally increases with age, especially in individuals who are middle-aged and older3. Undoubtedly, CG significantly reduces people's quality of life, emphasiz....

Protocol

The procedures for the care and use of animals were approved by the Ethics Committee of Mianyang Normal University, and all relevant institutional and governmental regulations concerning the ethical use of animals were strictly followed. For the present study, SPF rats (Kunming species, both male and female, weighing 180-220 g) were utilized. The animals were obtained from a commercial source (see Table of Materials). All animals were housed in a pathogen-free environment and provided ad libitum.......

Representative Results

The results of the pathological section of the stomach wall are depicted in Figure 1. In comparison to Group C, Group M exhibited mild gastric wall atrophy and mild inflammation. However, when compared to Group M, Group T showed no evident inflammation, intestinal metaplasia, or atrophy. This suggests that D. caudatum decoction can effectively improve gastritis.

The serum gastrointestinal hormone assay results are presented in Figure .......

Discussion

D. caudatum, a commonly used folk medicine by the Qiang nationality12, has shown significant efficacy in treating gastrointestinal diseases. With the advancement of modern pharmacological research, the imbalance of flora resulting from gastrointestinal microecology imbalance is identified as a key factor in acute and chronic gastrointestinal diseases22,23. Certain microorganisms in the intestinal tract play a crucial role in maint.......

Acknowledgements

This work was funded by the Key R&D projects of the Science and Technology Department of Sichuan Province (2020YFS0539).

....

Materials

NameCompanyCatalog NumberComments
Alpha diversity analysisMothur 1.30.2
AxyPrep deoxyribonucleic acid (DNA) gel extraction kit Axygen Biosciences AP-GX-50
Beta diversity analysisQiime 1.9.1
Cryogenic refrigeratorForma-86C ULT freezer
Desmodium caudatumThe Traditional Chinese Medicine Hospital of Beichuan Qiang Autonomous County
E.Z.N.A. soil kitOmega Bio-tekD5625-01
Illumina MiSeq PlatformIllumina Miseq PE300/NovaSeq PE250
Multiskan SpectrumspectraMax i3
OTU clusteringUparse 7.0.1090
OTU statisticsUsearch 7.0
PCR instrumentTransGen AP221-02
PCR instrumentABI GeneAmp 9700
QuantiFluor-ST double-stranded DNA (dsDNA) systemPromega Corp.
Sequence classification annotationRDP Classifier 2.11
Sodium salicylateSichuan Xilong Chemical Co., Ltd54-21-7
SPF ratsChengdu Dashuo Experimental Animal Co., Ltd
SPSS 18.0IBM

References

  1. Marginean, C. M., et al. The importance of accurate early diagnosis and eradication in Helicobacter pylori infection: pictorial summary review in children and adults. Antibiotics (Basel). 12 (1), 60 (2022).
  2. Sipponen, P., Maaroos, H. I.

Explore More Articles

Desmodium CaudatumGastrointestinal HormonesIntestinal FloraGastritisChronic GastricMalondialdehydeGastrin16S RRNA Gene SequencingELISA

This article has been published

Video Coming Soon

JoVE Logo

Privacy

Terms of Use

Policies

Research

Education

ABOUT JoVE

Copyright © 2024 MyJoVE Corporation. All rights reserved