Name: Preparation of Bamboo Seedlings and Agrobacterium -Mediated In Planta Transformation System for Gene Expression
Uploaded: 2023-08-18T12:30:00
Description: Watch this Scientific Journal Video about Preparation of Bamboo Seedlings and Agrobacterium -Mediated In Planta Transformation System for Gene Expression at JoVE.com

preparation of bamboo seedlings and agrobacterium-mediated in planta transformation system for gene expression

Bamboo의 유전자 형질전환 및 편집 방법 개발

The investigation of gene function in bamboo holds great promise for the advanced understanding of bamboo and unlocking its potential for genetic modification. An effective way of this can be achieved through the process of Agrobacterium-mediated infection in bamboo leaves, whereby the T-DNA fragment containing exogenous genes is introduced into the cells, subsequently leading to the expression of the genes within the leaf cells.
Bamboo is a valuable and renewable resource with a wide range of applications in manufacturing, art, and research. Bamboo possesses excellent wood properties such as high mechanical strength, toughness, moderate stiffness, and flexibility1, which is now widely used in a variety of household and industrial supplies, including toothbrushes, straws, buttons, disposable tableware, underground pipelines, and cooling tower fillers for thermal power generation. Therefore, bamboo breeding plays a crucial role in obtaining bamboo varieties with excellent wood properties for replacing plastics and reducing plastic usage, protecting the environment, and tackling climate change, as well as generating significant economic value.
However, traditional bamboo breeding faces challenges due to the lengthy vegetative growth stage and uncertain flowering period. Although molecular breeding techniques have been developed and applied to bamboo breeding, the process of bamboo gene transformation is time-consuming, labor-intensive, and complicated due to the callus induction and regeneration processes2,3,4,5. Stable genetic transformation often requires Agrobacterium-mediated methods, which involve tissue culture processes such as callus induction and regeneration. However, bamboo has a low ability for callus regeneration, greatly limiting the application of stable genetic transformation in bamboo. After Agrobacterium infects plant cells, the T-DNA fragment enters the plant cells, with the majority of T-DNA fragments remaining non-integrated in the cells, resulting in transient expression. Only a small portion of T-DNA fragments randomly integrate into its chromosome, leading to stable expression. The transient expression levels show an accumulation curve that can vary for each gene expressed from an Agrobacterium-delivered T-DNA. In most cases, the highest expression levels occur 3-4 days after infiltration and quickly decrease after 5-6 days6,7. Previous studies have shown that more than 1/3rd of mutations in gene-edited plants obtained without selection pressure for resistance come from the transient expression of CRISPR/Cas9, while the remaining less than 2/3rd come from stable expression after DNA integration into the genome8. This indicates that T-DNA integration into the plant genome is not necessary for gene editing. Moreover, selection pressure for resistance significantly inhibits the growth of non-transgenic cells, directly affecting the regeneration process of infected explants. Therefore, by using transient expression without selection pressure for resistance in bamboo, it is possible to achieve non-integrated expression of exogenous genes and study gene function directly in plant organs. Hence, an easy and time-saving method can be developed for exogenous gene expression and editing in bamboo9.
The developed exogenous gene expression and gene editing method is characterized by its simplicity, cost-effectiveness, and the absence of expensive equipment or complex procedures9. In this method, the bamboo endogenous violaxanthin de-epoxidase gene (PeVDE) was used as the reporter for exogenous gene expression without selection pressure. This is because the edited PeVDE in bamboo leaves reduces the photoprotection ability under high light and demonstrates a decrease in the non-photochemical quenching (NPQ) value, which can be detected through chlorophyll fluorescence imaging. To demonstrate the effectiveness of this method, another bamboo endogenous gene, the cinnamoyl-CoA reductase gene (PeCCR5)9, was knocked out using this system and successfully generated mutants of this gene. This technique can be used for the functional characterization of genes that have functions in bamboo leaves. By overexpressing these genes transiently in bamboo leaves, their expression levels can be enhanced, or by gene editing, their expression can be knocked down, allowing for the study of downstream gene expression levels, leaf phenotypes, and product contents. This provides a more efficient and feasible approach for gene function research in bamboo. This technique can be applied to the functional characterization of genes that function in bamboo leaves. By overexpressing these genes transiently in bamboo leaves, their expression levels can be enhanced, or by gene editing, their expression can be knocked down, allowing for the study of downstream gene expression levels, leaf phenotypes, and product contents. Additionally, it is important to note that, due to extensive polyploidization, the majority of commercially important genes in bamboo genomes are present in multiple copies, resulting in genetic redundancy. This poses a challenge for performing multiplex genome editing in bamboo. Prior to the application of stable genetic transformation or gene editing techniques, it is crucial to quickly validate gene functions. In addressing the issue of multiple gene copies, one approach is to analyze transcriptome expression profiles to identify genes that are actively expressed during specific stages. Furthermore, targeting the conserved functional domains of these gene copies allows for the design of common target sequences or the incorporation of multiple target sites into the same CRISPR/Cas9 vector, enabling the simultaneous knockout of these genes. This provides a more efficient and feasible approach for gene function research in bamboo.

저자 스포트라이트: 지속 가능한 플라스틱 대체품을 위한 대나무 잎의 유전자 편집 발전 

플란타에 위치 Moso Bamboo Leaves의 유전자 발현 및 유전자 편집

In this study, we used Agrobacterium as a vector to introduce foreign DNA fragments into bamboo leaves. Most DNA fragments are not integrated into chromosomes and undergo transient expression. We took advantage of this transient expression to carry out gene editing.The main challenge is the limitation of gene editing of bamboo leaves, which cannot regenerate. This propose difficulties in performing editing in regenerative organs, like young shoots, and obtaining edited branches or subsequent generations with desired genetic challenges. Its main advantage is the time-saving aspect of the principle.By being able to edit bamboo genes directly in bamboo leaves, it allows for quick verification of gene fractions. This eliminates the needs for time-consuming procedures, like tissue culture or transformation, significantly speeding up research on bamboo gene fractions. The primary research will be focused on investigating the molecular mechanism of bamboo biomass formation.This will involve understanding why bamboo grows rapidly, and using that knowledge to develop bamboo varieties which are suitable for plastic substituent.

Watch this Scientific Journal Video about Preparation of Bamboo Seedlings and Agrobacterium -Mediated In Planta Transformation System for Gene Expression at JoVE.com

Preparation of Bamboo Seedlings and Agrobacterium -Mediated In Planta Transformation System for Gene Expression  

유전자 발현을 위한 Planta 형질전환 시스템에서 대나무 묘목 및 Agrobacterium 매개 제조

시작하려면 미리 담근 대나무 씨앗을 토양 기질에 뿌리고 발아를 위해 질석을 뿌립니다. 아그로박테리아 감염의 경우 토양이 부착된 뿌리가 있는 15일 된 묘목을 기질에서 조심스럽게 제거합니다. 수분을 유지하고 토양 분리를 방지하기 위해 묘목을 은박지로 감쌉니다.포장된 묘목을 습도가 높고 조명이 낮은 식물 성장실로 2시간 동안 옮깁니다. 그런 다음 주사기의 날카로운 바늘을 사용하여 말린 미성숙 잎의 윗부분을 한두 번 감습니다. 잎의 상처 부위를 아그로박테리아 현탁액에 재빨리 담그십시오.그런 다음 묘목을 즉시 2 분 동안 25-27 밀리미터의 수은 압력으로 진공 챔버로 옮깁니다. 진공 청소기로 청소한 후 묘목의 포장을 조심스럽게 풀고 기질에 다시 심습니다. 묘목은 습도가 높은 희미한 조명의 식물 성장 챔버에서 이틀 동안 자랄 수 있습니다.그런 다음 정상적인 성장 조건에서 묘목을 배양하고 5-7일마다 물을 줍니다.

Research

JoVE Journal

Biology

Preparation of Bamboo Seedlings and Agrobacterium-Mediated In Planta Transformation System for Gene Expression

In Planta Gene Expression and Gene Editing in Moso Bamboo Leaves

A novel in planta gene transformation method was developed for bamboo, which avoids the need for time-consuming and labor-intensive callus induction and ...