Name: one-step negative chromatographic purification of helicobacter pylori neutrophil-activating protein overexpressed in escherichia coli in batch mode
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Description: Watch this Scientific Journal Video about One-step Negative Chromatographic Purification of Helicobacter pylori Neutrophil-activating Protein Overexpressed in Escherichia coli in Batch Mode at JoVE.co

We thank Dr. Chao-Sheng Cheng at National Tsing Hua University, Taiwan, for performing the circular dichroism measurement. We also thank Drs. Evanthia Galanis and Ianko D. Iankov at Mayo Clinic, USA, for providing the anti-HP-NAP monoclonal antibody. We appreciate Drs. Han-Wen Chang and Chung-Chu Chen at Mackay Memorial Hospital, Hsinchu, Taiwan, for providing advice for IRB application, Mr. Te-Lung Tsai at the Mackay Memorial Hospital, Hsinchu, Taiwan, for supervising the analysis of isolated neutrophils, and Ms. Ju-Chen Weng at National Tsing Hua University, Taiwan, for her technical assistance. This work was supported by grants from the Ministry of Science and Technology of Taiwan (MOST 104-2311-B-007-003, NSC101-2311-B-007-007 and NSC98-2311-B-007-006-MY3), the Joint Research Program of National Tsing Hua University and Mackay Memorial Hospital (100N7727E1, 101N2727E1, 103N2773E1), and the research program of National Tsing Hua University (104N2052E1).

Il sangue umano è stato raccolto da volontari sani con il previo consenso informato scritto e approvazione da parte del Institutional Review Board della National Tsing Hua University, Hsinchu, Taiwan. 1. Espressione ricombinante HP-NAP in E. coli <ol><li> Preparare il plasmide pET42a-NAP che contiene la sequenza di DNA di HP-NAP da H. pylori 26695 ceppo come descritto in precedenza 16. Preparare i plasmidi contenenti la sequenza di DNA di HP-NAP con le mutazioni puntiformi desider...

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La modalità di cromatografia lotto negativo con resine a scambio anionico DEAE qui presentata è adatto per la purificazione di ricombinante HP-NAP sovraespresso in E. coli. I valori di pH dei tamponi usati nelle fasi di lisi cellulare e purificazione sono molto critici per assicurare la solubilità di HP-NAP in E. lisati coli e efficiente separazione dei ricombinante HP-NAP dalle impurità cellula ospite, rispettivamente. Le cellule batteriche devono essere lisati a pH 9,0, e la purificazion...

Helicobacter pylori (H. pylori) è una delle principali cause di gastrite e ulcera peptica. Questo batterio è stato classificato come sostanza cancerogena per l&#39;uomo dall&#39;Agenzia internazionale per la ricerca sul cancro, che fa parte dell&#39;Organizzazione Mondiale della Sanità, nel 1994. E &#39;stato stimato che la prevalenza di H. pylori è del 70% nei paesi in via di sviluppo e il 30-40% nei paesi industrializzati 1. Anche se il tasso di infezione di H. pylori è in calo nei paesi industrializzati, il tasso di infezione di H. pylori nei paesi in via di sviluppo è ancora alto 2. Il trattamento standard per sradicare H. pylori consiste nella somministrazione di un inibitore della pompa protonica, PPI, e due antibiotici, claritromicina più amoxicillina o metronidazolo 3. Tuttavia, l&#39;aumento della resistenza agli antibiotici in H. pylori -related terapia dell&#39;ulcera sollecita lo sviluppo di nuove strategie per prevenire or curare l&#39;infezione. Sviluppo di vaccinazione preventiva e / o terapeutico contro H. pylori potrebbe fornire un approccio alternativo per controllare H. pylori. Helicobacter pylori neutrofili-attivazione di proteine ​​(HP-NAP), un importante fattore di virulenza di H. pylori, è stato identificato in estratti di acqua di H. pylori con la possibilità di attivare neutrofili di aderire alle cellule endoteliali e produrre specie reattive dell&#39;ossigeno (ROS) 4. Infiltrazione dei neutrofili della mucosa gastrica si trovano in H. pylori pazienti infettati con gastrite attiva possono provocare infiammazione e danni ai tessuti dello stomaco. Così, HP-NAP può giocare un ruolo patologico attivando neutrofili per indurre infiammazione gastrica, che provoca ulteriore ulcera o H. pylori -associated malattie gastriche. Tuttavia, HP-NAP è un potenziale candidato per le applicazioni cliniche 5,6. A causa della pro immunogenica e immunomodulanteprietà di HP-NAP, questa proteina potrebbero essere utilizzati per sviluppare vaccini, agenti terapeutici, e strumenti diagnostici. Uno studio clinico è stato condotto per l&#39;utilizzo ricombinante HP-NAP come uno dei componenti di un vaccino contro H. proteine pylori. Questo vaccino è costituito da ricombinante HP-NAP, cytotoxin associata gene A (CagA), e le proteine ​​vacuolizzante citotossina A (VacA) formulato con idrossido di alluminio ed è stato ulteriormente dimostrato di essere sicuro ed immunogenico negli esseri umani 7. Inoltre, HP-NAP agisce come un potente immunomodulatore per innescare T helper di tipo 1 (Th1) -polarized risposte immunitarie per la terapia del cancro 8 e per regolare le risposte immunitarie Th2-mediate indotte da reazioni allergiche e infezioni parassitarie 9,10. Per quanto riguarda la diagnostica, ricombinante ELISA HP-NAP-based è stata applicata per rilevare gli anticorpi sierici contro HP-NAP in H. pylori -infected pazienti 11. Uno studio ha mostrato che il livello di anticorpi specifici per HP-NAP nei sieri di H. pylori -infected pazienti con cancro gastrico è risultata significativamente più alta di quella di pazienti con gastrite cronica 12. Un altro studio ha anche dimostrato che gli anticorpi sierici contro HP-NAP sono associati con la presenza di non-cardias adenocarcinoma gastrico 13. Così, ricombinante ELISA HP-NAP-based può essere applicata per rilevare anticorpi contro HP-NAP per la prognosi del cancro gastrico in H. pylori -infected pazienti. Nel loro insieme, la HP-NAP purificata potrebbe essere ulteriormente utilizzato per la prevenzione, il trattamento e la prognosi di H. pylori -associated malattie e terapia del cancro. Tra i vari metodi utilizzati per la purificazione di ricombinante HP-NAP espresso in Escherichia coli (E. coli), nella sua forma nativa, presentate finora, una cromatografia di gel-filtrazione seconda fase di purificazione che coinvolge è necessario per ottenere elevata purezza HP-NAP 14-16 . Qui, un metodo che utilizza negativo cromatografia modalità batch condietilamminoetil (DEAE) resine a scambio ionico è descritto per la purificazione di HP-NAP sovraespresso in E. coli con alto rendimento e di elevata purezza. Questa tecnica di purificazione è stata basata sul legame di proteine ​​della cellula ospite e / o impurezze diverse HP-NAP alla resina. A pH 8,0, quasi senza altre proteine ​​tranne HP-NAP vengono recuperati dalla frazione non legata. Questo approccio purificazione mediante DEAE cromatografia a scambio ionico in modalità negativa è semplice e risparmio consentendo purificazione ricombinante HP-NAP tramite one-step cromatografia attraverso la raccolta della frazione libera tempo. Oltre ad HP-NAP, diverse altre biomolecole, come virus 17, Immunoglobulina G (IgG) 18, emoglobina 19, proteina fosfatasi 20, e fattore di virulenza flagellin 21, sono stati segnalati anche ad essere purificata dalla cromatografia a scambio ionico in negativo modalità. La modalità negativa è preferito per cromatografia a scambio ionico se impurità sono il minorecomponenti presenti nel campione sottoposto da depurare 22. L&#39;applicazione della cromatografia negativo purificazione di biomolecole naturali o ricombinanti è stato recentemente rivisto 23. Il presente rapporto fornisce un passo per passo il protocollo per l&#39;espressione ricombinante HP-NAP in E. coli, la lisi delle cellule, e purificazione di HP-NAP utilizzando modalità negativa cromatografia batch con resine a scambio ionico DEAE. Se una proteina desiderata per purificazione è adatto per cromatografia a scambio ionico in modo negativo, il protocollo descritto potrebbe anche essere adattato come punto di partenza per lo sviluppo di un processo di purificazione.

<table border="1" fo:keep-together.within-page="1" fo:keep-with-next.within-page="always">
	<tbody>
		<tr>
			<td>Material</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>pET42a-NAP&#160;</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>prepared as described in Supplementary data of Refernce 15&#160; 
			http://www.sciencedirect.com/science/article/pii/S0006291X08018317</td>
		</tr>
		<tr>
			<td>E. coli BL21 (DE3)</td>
			<td>Thermo Fisher Scientific Inc</td>
			<td>C6000-03</td>
			<td>https://www.thermofisher.com/order/catalog/product/C600003</td>
		</tr>
		<tr>
			<td>Kanamycin</td>
			<td>Amresco</td>
			<td>25389-94-0</td>
			<td>http://www.amresco-inc.com/KANAMYCIN-SULFATE-0408.cmsx</td>
		</tr>
		<tr>
			<td>Isopropyl &#946;-D-1-thiogalactopyranoside (IPTG)</td>
			<td>MD Biomedical Inc</td>
			<td>101-367-93-1</td>
			<td>http://www.antibody-antibodies.com/product_det.php?id=238064&#38;supplier=search&#38;name =IPTG%20</td>
		</tr>
		<tr>
			<td>phenylmethylsulfonyl fluoride (PMSF)</td>
			<td>Sigma-Aldrich</td>
			<td>10837091001</td>
			<td>protease inhibitor 
			http://www.sigmaaldrich.com/catalog/product/roche/PMSFRO?lang=en&#38;region=TW</td>
		</tr>
		<tr>
			<td>N-alpha-tosyl-L-lysinyl-chloromethylketone (TLCK)</td>
			<td>Sigma-Aldrich</td>
			<td>T7254</td>
			<td>protease inhibitor 
			http://www.sigmaaldrich.com/catalog/product/sigma/t7254?lang=en&#38;region=TW</td>
		</tr>
		<tr>
			<td>N-tosyl-L-phenylalaninyl-chloromethylketone (TPCK)</td>
			<td>Sigma-Aldrich</td>
			<td>T4376</td>
			<td>protease inhibitor 
			http://www.sigmaaldrich.com/catalog/product/sigma/t4376?lang=en&#38;region=TW</td>
		</tr>
		<tr>
			<td>Bio-Rad protein assay dye reagent concentrate</td>
			<td>Bio&#8208;Rad</td>
			<td>500-0006</td>
			<td>for protein quantitation 
			http://www.bio-rad.com/en-us/sku/5000006-bio-rad-protein-assay-dye-reagent-concentrate</td>
		</tr>
		<tr>
			<td>Protein standard (bovine serum albumin)</td>
			<td>Sigma-Aldrich</td>
			<td>P5619&#160;</td>
			<td>a standard protein for Bio-Rad Protein Assay 
			http://www.sigmaaldrich.com/catalog/product/fluka/p5619?lang=en&#38;region=TW</td>
		</tr>
		<tr>
			<td>DEAE&#8211;Sephadex &#160;A-25 chloride form</td>
			<td>Sigma-Aldrich</td>
			<td>A25120</td>
			<td>http://www.sigmaaldrich.com/catalog/product/sigma/a25120?lang=en&#38;region=TW</td>
		</tr>
		<tr>
			<td>Spectrum/Por dialysis tubing</td>
			<td>Spectrum Laboratories</td>
			<td>132720</td>
			<td>with molecular weight cutoff of 14 kDa 
			http://www.spectrumlabs.com/dialysis/RCtubing.html?Pn=132720;</td>
		</tr>
		<tr>
			<td>Acrodisc&#174; units with Mustang&#174; E membrane</td>
			<td>Pall</td>
			<td>MSTG25E3</td>
			<td>for endotoxin removal; operated at flow rates ranging from 1 to 4 ml/min 
			http://www.pall.com/main/laboratory/product.page?id=19992</td>
		</tr>
		<tr>
			<td>mouse monoclonal antibody MAb 16F4</td>
			<td>N/A</td>
			<td>N/A</td>
			<td>raised against the purified HP-NAP of H. pylori strain NCTC 11637 as described in Refernce 23;&#160; A gift from Drs. Evanthia Galanis and Ianko D. Iankov at Mayo Clinic, USA 
			http://www.sciencedirect.com/science/article/pii/S0264410X10017585</td>
		</tr>
		<tr>
			<td>HiLoad 16/600 Superdex 200 pg</td>
			<td>GE Healthcare Life Sciences</td>
			<td>28989335</td>
			<td>for gel filtration chromatography 
			http://www.gelifesciences.com/webapp/wcs/stores/servlet/productById/en/GELifeSciences-tw/28989335</td>
		</tr>
		<tr>
			<td>PlusOne silver staining kit, protein</td>
			<td>GE Healthcare Life Sciences</td>
			<td>17-1150-01</td>
			<td>http://www.gelifesciences.com/webapp/wcs/stores/servlet/productById/en/GELifeSciences-tw/17115001</td>
		</tr>
		<tr>
			<td>Ficoll-Paque PLUS</td>
			<td>GE Healthcare Life Sciences</td>
			<td>17-1440-02</td>
			<td>for density gradient centrifugation to purify human neutrophils 
			http://www.gelifesciences.com/webapp/wcs/stores/servlet/catalog/en/GELifeSciences-tw/products/AlternativeProductStructure _16963/17144002</td>
		</tr>
		<tr>
			<td>Flat bottom 96-well white plate</td>
			<td>Thermo Fisher Scientific Inc</td>
			<td>236108</td>
			<td>http://www.thermoscientific.com/en/product/nunc-f96-microwell-black-white-polystyrene-plate.html</td>
		</tr>
		<tr>
			<td>Luminol</td>
			<td>Sigma-Aldrich</td>
			<td>A8511</td>
			<td>protected from light 
			http://www.sigmaaldrich.com/catalog/product/sigma/a8511?lang=en&#38;region=TW</td>
		</tr>
		<tr>
			<td>Expand &#160;long template PCR system</td>
			<td>Sigma-Aldrich</td>
			<td>11681834001</td>
			<td>source of High Fidelity PCR enzyme mix 
			http://www.sigmaaldrich.com/catalog/product/roche/elongro?lang=en&#38;region=TW</td>
		</tr>
		<tr>
			<td>Dpn I</td>
			<td>New England Biolabs</td>
			<td>R0176S</td>
			<td>https://www.neb.com/products/r0176-dpni</td>
		</tr>
		<tr>
			<td>Xho I</td>
			<td>New England Biolabs</td>
			<td>R0146S</td>
			<td>https://www.neb.com/products/r0146-xhoi</td>
		</tr>
		<tr>
			<td>E. coli DH5&#945;</td>
			<td>Thermo Fisher Scientific Inc</td>
			<td>18265-017</td>
			<td>https://www.thermofisher.com/order/catalog/product/18265017</td>
		</tr>
		<tr>
			<td>Name</td>
			<td>Company</td>
			<td>Product Number</td>
			<td>Comments</td>
		</tr>
		<tr>
			<td>Equipment</td>
			<td></td>
			<td></td>
			<td> 
			&#160;</td>
		</tr>
		<tr>
			<td>U-2800 double beam UV/VIS spectrophotometer</td>
			<td>Hitachi&#160;</td>
			<td>N/A</td>
			<td>out of market and upgraded to a new model 
			http://hitachi-hta.com/products/life-sciences-chemical-analysis/uvvisible-spectrophotometers</td>
		</tr>
		<tr>
			<td>EmulsiFlex-C3 high pressure homogenizer</td>
			<td>Avestin Inc</td>
			<td>C315320</td>
			<td>http://www.avestin.com/English/c3page.html</td>
		</tr>
		<tr>
			<td>Hitachi Koki himac CP80WX general ultracentrifuge</td>
			<td>Hitachi Koki Co</td>
			<td>90106401</td>
			<td>for separation of the soluble and insoluble protein fractions from E. coli lysates 
			http://centrifuges.hitachi-koki.com/products/ultra/cp_wx/cp_wx.html</td>
		</tr>
		<tr>
			<td>&#196;KTA FPLC</td>
			<td>GE Healthcare Life Sciences</td>
			<td>18-1900-26</td>
			<td>for gel filtration chromatography 
			http://www.gelifesciences.com/webapp/wcs/stores/servlet/productById/en/GELifeSciences-tw/18190026</td>
		</tr>
		<tr>
			<td>Aviv model 62ADS CD spectrophotometer</td>
			<td>Aviv Biomedical</td>
			<td>N/A</td>
			<td>out of market and upgraded to a new model 
			http://www.avivbiomedical.com/circular.php</td>
		</tr>
		<tr>
			<td>LAS-3000 imaging system</td>
			<td>Fujifilm</td>
			<td>N/A</td>
			<td>discontinued and replaced 
			http://www.gelifesciences.com/webapp/wcs/stores/servlet/productById/en/GELifeSciences-tw/28955810</td>
		</tr>
		<tr>
			<td>Wallac 1420 (Victor2) multilabel counter</td>
			<td>Perkin-Elmer</td>
			<td>1420-018</td>
			<td>for chemiluminescence detection 
			http://www.perkinelmer.com/catalog/product/id/1420-018</td>
		</tr>
	</tbody>
</table>

one-step negative chromatographic purification of helicobacter pylori neutrophil-activating protein overexpressed in escherichia coli in batch mode

Helicobacter pylori neutrofili-attivazione di proteine ​​(HP-NAP) è un importante fattore di virulenza di Helicobacter pylori (H. pylori). Essa svolge un ruolo fondamentale in H. pylori indotta infiammazione gastrica attivando diversi leucociti innate tra neutrofili, monociti e mastociti. Le proprietà immunogeniche e immunomodulanti di HP-NAP lo rendono un candidato potenziale diagnostico e vaccino per H. pylori e un nuovo candidato farmaco per la terapia del cancro. Per ottenere quantità sostanziali di purificato HP-NAP utilizzato per le sue applicazioni cliniche, un metodo efficace per purificare questa proteina con alta resa e purezza deve essere stabilito. In questo protocollo, abbiamo descritto un metodo per un passo negativo purificazione cromatografica ricombinante HP-NAP sovraespresso in Escherichia coli (E. coli) utilizzando dietilamminoetil (DEAE) resine a scambio ionico (per es., Sephadex) imodalità batch n. Ricombinante HP-NAP costituisce quasi il 70% delle proteine ​​totali in E. coli ed è quasi completamente recuperato nella frazione solubile upon lisi cellulare a pH 9,0. A condizione ottimale a pH 8,0, la maggioranza di HP-NAP viene recuperato nella frazione non legata mentre le proteine ​​endogene da E. coli sono efficacemente rimossi dalla resina. Questo metodo di purificazione mediante cromatografia modalità negativa batch con resine a scambio ionico DEAE produce funzionale HP-NAP da E. coli nella sua forma nativa con alta resa e purezza. L&#39;HP-NAP purificata potrebbe essere ulteriormente utilizzato per la prevenzione, il trattamento e la prognosi di H. pylori -associated malattie e terapia del cancro.

Lo schema della procedura sperimentale di purificazione negativo ricombinante HP-NAP espressa in E. coli mediante resine a scambio ionico DEAE in modalità batch è mostrato in Figura 1. Questa tecnica di purificazione è basato sul legame di proteine ​​della cellula ospite e / o impurezze diverse HP-NAP alla resina. A pH 8,0, quasi senza altre proteine ​​tranne HP-NAP nella sua forma nativa vengono recuperati dalla frazione libera (Figura 2A</st...

Watch this Scientific Journal Video about One-step Negative Chromatographic Purification of Helicobacter pylori Neutrophil-activating Protein Overexpressed in Escherichia coli in Batch Mode at JoVE.co

One-step Negative Chromatographic Purification of Helicobacter pylori Neutrophil-activating Protein Overexpressed in Escherichia coli in Batch Mode

Un metodo ad alto rendimento per un solo passaggio di purificazione negativo ricombinante Helicobacter pylori neutrofili-attivazione di proteine ​​(HP-NAP) sovraespresso in Escherichia coli utilizzando resine dietilamminoetil in modalità batch è descritta. HP-NAP purificata da questo metodo è utile per lo sviluppo di vaccini, farmaci, o diagnostica per H. pylori -associated malattie.

Un passo negativo cromatografica Purificazione di<em&gt; Helicobacter pylori</em&gt; Neutrofili-attivazione della proteina sovraespresso in<em&gt; Escherichia coli</em&gt; In modalità batch

Helicobacter pylori neutrophil-activating protein (HP-NAP) is a major virulence factor of Helicobacter pylori (H. pylori). It plays a critical role in H. ...

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JoVE Journal

Immunology and Infection

One-step Negative Chromatographic Purification of Helicobacter pylori Neutrophil-activating Protein Overexpressed in Escherichia coli in Batch Mode

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