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JoVE Journal

Biochemistry

This content is Open Access.

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web

15.2K Views

09:51 min

July 16th, 2017

July 16th, 2017

15,184 Views

0:05

Title

0:40

Structure Search and Selection (SEARCH)

1:46

Multiple Sequence Alignment Analysis (ALIGN)

2:51

Structure Fitting and Analysis (FIT)

3:52

Principle Component Analysis (PCA)

5:24

Ensemble Normal Mode Analysis (eNMA)

6:52

Results: Bio3D-web Analysis of Adenylate Kinase

8:01

Conclusion

Transcript

A protocol for the online investigation of protein sequence-structure-dynamics relationships using Bio3D-web is presented.

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