Bao Tran

NCI CCR Sequencing Facility

Frederick National Laboratory for Cancer Research

BIOGRAPHY

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PUBLICATIONS

Interleukin-27 treated human macrophages induce the expression of novel microRNAs which may mediate anti-viral properties.

Biochemical and biophysical research communications May, 2013 | Pubmed ID: 23535375

Histone H3 Lysine 27 demethylases Jmjd3 and Utx are required for T-cell differentiation.

Nature communications Sep, 2015 | Pubmed ID: 26328764

Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts.

Nature communications , 2016 | Pubmed ID: 26899007

Towards Better Precision Medicine: PacBio Single-Molecule Long Reads Resolve the Interpretation of HIV Drug Resistant Mutation Profiles at Explicit Quasispecies (Haplotype) Level.

Journal of data mining in genomics & proteomics Jan, 2016 | Pubmed ID: 26949565

Distinguishing highly similar gene isoforms with a clustering-based bioinformatics analysis of PacBio single-molecule long reads.

BioData mining , 2016 | Pubmed ID: 27051465

Single-cell analysis reveals cancer stem cell heterogeneity in hepatocellular carcinoma.

Hepatology (Baltimore, Md.) 07, 2018 | Pubmed ID: 29315726

Genetics and Pathogenesis of Diffuse Large B-Cell Lymphoma.

The New England journal of medicine 04, 2018 | Pubmed ID: 29641966

The Emergence and Functional Fitness of Memory CD4 T Cells Require the Transcription Factor Thpok.

Immunity 01, 2019 | Pubmed ID: 30638736

Genome Assembly and Annotation of the Trichoplusia ni Tni-FNL Insect Cell Line Enabled by Long-Read Technologies.

Genes 01, 2019 | Pubmed ID: 30678108

Robustness of RNA sequencing on older formalin-fixed paraffin-embedded tissue from high-grade ovarian serous adenocarcinomas.

PloS one , 2019 | Pubmed ID: 31059554

Complete Genome Sequence of Herpes Simplex Virus 1 Strain MacIntyre.

Microbiology resource announcements Sep, 2019 | Pubmed ID: 31515348

Complete Genome Sequence of Herpes Simplex Virus 1 Strain McKrae.

Microbiology resource announcements Sep, 2019 | Pubmed ID: 31558635

Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer.

Cancer cell 10, 2019 | Pubmed ID: 31588021

Single-Cell Profiling Defines Transcriptomic Signatures Specific to Tumor-Reactive versus Virus-Responsive CD4 T Cells.

Cell reports 12, 2019 | Pubmed ID: 31801070

INSTITUTIONS

Frederick National Laboratory for Cancer Research

JOVE ARTICLES

Optimization for Sequencing and Analysis of Degraded FFPE-RNA Samples

Yelena Levin^*,1,

Keyur Talsania^*,1,2,

Bao Tran¹,

Jyoti Shetty¹,

Yongmei Zhao^1,2,

Monika Mehta¹

¹NCI CCR Sequencing Facility, Frederick National Laboratory for Cancer Research,

²Advanced Biomedical and Computational Sciences, Frederick National Laboratory for Cancer Research

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