Department of Molecular,
Cellular and Developmental Biology,
Department of Molecular, Cellular and Developmental Biology
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Improving reproducibility and sensitivity in identifying human proteins by shotgun proteomics.
Analytical chemistry Jul, 2004 | Pubmed ID: 15228325
Comparison of label-free methods for quantifying human proteins by shotgun proteomics.
Molecular & cellular proteomics : MCP Oct, 2005 | Pubmed ID: 15979981
Improved validation of peptide MS/MS assignments using spectral intensity prediction.
Molecular & cellular proteomics : MCP Jan, 2007 | Pubmed ID: 17018520
Achieving in-depth proteomics profiling by mass spectrometry.
ACS chemical biology Jan, 2007 | Pubmed ID: 17243782
Mps1 activation loop autophosphorylation enhances kinase activity.
The Journal of biological chemistry Oct, 2007 | Pubmed ID: 17728254
Mapping protein post-translational modifications with mass spectrometry.
Nature methods Oct, 2007 | Pubmed ID: 17901869
A simulated MS/MS library for spectrum-to-spectrum searching in large scale identification of proteins.
Molecular & cellular proteomics : MCP Apr, 2009 | Pubmed ID: 19106086
Budding yeast centrosome duplication requires stabilization of Spc29 via Mps1-mediated phosphorylation.
The Journal of biological chemistry May, 2009 | Pubmed ID: 19269975
Functional proteomics identifies targets of phosphorylation by B-Raf signaling in melanoma.
Molecular cell Apr, 2009 | Pubmed ID: 19362540
Quantifying the impact of chimera MS/MS spectra on peptide identification in large-scale proteomics studies.
Journal of proteome research Aug, 2010 | Pubmed ID: 20578722
Spectrum-to-spectrum searching using a proteome-wide spectral library.
Molecular & cellular proteomics : MCP Jul, 2011 | Pubmed ID: 21532008
IsoformResolver: A peptide-centric algorithm for protein inference.
Journal of proteome research Jul, 2011 | Pubmed ID: 21599010
The non-coding B2 RNA binds to the DNA cleft and active-site region of RNA polymerase II.
Journal of molecular biology Oct, 2013 | Pubmed ID: 23416138
Identification of global ferredoxin interaction networks in Chlamydomonas reinhardtii.
The Journal of biological chemistry Dec, 2013 | Pubmed ID: 24100040
Development of substrate-selective probes for affinity pulldown of histone demethylases.
ACS chemical biology Jan, 2015 | Pubmed ID: 25335116
Licensing of yeast centrosome duplication requires phosphoregulation of sfi1.
PLoS genetics Oct, 2014 | Pubmed ID: 25340401
Gas-phase acidities of nitrated azoles as determined by the extended kinetic method and computations.
The journal of physical chemistry. A Jan, 2015 | Pubmed ID: 25521708
Identification of a family of fatty-acid-speciated sonic hedgehog proteins, whose members display differential biological properties.
Cell reports Mar, 2015 | Pubmed ID: 25732819
A Phosphoproteomic Comparison of B-RAFV600E and MKK1/2 Inhibitors in Melanoma Cells.
Molecular & cellular proteomics : MCP Jun, 2015 | Pubmed ID: 25850435
Large-Scale Examination of Factors Influencing Phosphopeptide Neutral Loss during Collision Induced Dissociation.
Journal of the American Society for Mass Spectrometry Jul, 2015 | Pubmed ID: 25851653
Centromere protein F includes two sites that couple efficiently to depolymerizing microtubules.
The Journal of cell biology Jun, 2015 | Pubmed ID: 26101217
Erratum to: Large-Scale Examination of Factors Influencing Phosphopeptide Neutral Loss During Collision Induced Dissociation.
Journal of the American Society for Mass Spectrometry Oct, 2015 | Pubmed ID: 26169511
Identification of Mediator Kinase Substrates in Human Cells using Cortistatin A and Quantitative Phosphoproteomics.
Cell reports Apr, 2016 | Pubmed ID: 27050516
A Synonymous Mutation Upstream of the Gene Encoding a Weak-Link Enzyme Causes an Ultrasensitive Response in Growth Rate.
Journal of bacteriology 10, 2016 | Pubmed ID: 27501982
Human TFIIH Kinase CDK7 Regulates Transcription-Associated Chromatin Modifications.
Cell reports 08, 2017 | Pubmed ID: 28768201
Identification of the primary peptide contaminant that inhibits fibrillation and toxicity in synthetic amyloid-β42.
PloS one , 2017 | Pubmed ID: 28792968
Specificity of Phosphorylation Responses to Mitogen Activated Protein (MAP) Kinase Pathway Inhibitors in Melanoma Cells.
Molecular & cellular proteomics : MCP 04, 2018 | Pubmed ID: 29255136
Dengue viruses cleave STING in humans but not in nonhuman primates, their presumed natural reservoir.
eLife 03, 2018 | Pubmed ID: 29557779
Synonymous mutations make dramatic contributions to fitness when growth is limited by a weak-link enzyme.
PLoS genetics 08, 2018 | Pubmed ID: 30148850
A Novel Class of ER Membrane Proteins Regulates ER-Associated Endosome Fission.
Cell 09, 2018 | Pubmed ID: 30220460
The nuclear interactome of DYRK1A reveals a functional role in DNA damage repair.
Scientific reports Apr, 2019 | Pubmed ID: 31024071
Temporal Metabolite, Ion, and Enzyme Activity Profiling Using Fluorescence Microscopy and Genetically Encoded Biosensors.
Methods in molecular biology (Clifton, N.J.) , 2019 | Pubmed ID: 31119673
Hidden resources in the genome restore PLP synthesis and robust growth after deletion of the essential gene .
Proceedings of the National Academy of Sciences of the United States of America Nov, 2019 | Pubmed ID: 31712440
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