Paul W. Sternberg

Anchor cell signaling and vulval precursor cell positioning establish a reproducible spatial context during C. elegans vulval induction.

Sensory processing by neural circuits in Caenorhabditis elegans.

C. elegans LIN-18 is a Ryk ortholog and functions in parallel to LIN-17/Frizzled in Wnt signaling.

Textpresso: an ontology-based information retrieval and extraction system for biological literature.

The L-type cyclin CYL-1 and the heat-shock-factor HSF-1 are required for heat-shock-induced protein expression in Caenorhabditis elegans.

An automated system for measuring parameters of nematode sinusoidal movement.

Transcriptional network underlying Caenorhabditis elegans vulval development.

FOS-1 promotes basement-membrane removal during anchor-cell invasion in C. elegans.

WormBase: better software, richer content.

Intercellular coupling amplifies fate segregation during Caenorhabditis elegans vulval development.

Pathway to RAS.

Genome-wide prediction of C. elegans genetic interactions.

A C. elegans stretch receptor neuron revealed by a mechanosensitive TRP channel homologue.

DAF-16/FOXO regulates transcription of cki-1/Cip/Kip and repression of lin-4 during C. elegans L1 arrest.

Conservation rules, their breakdown, and optimality in Caenorhabditis sinusoidal locomotion.

Automatic document classification of biological literature.

Initiation of male sperm-transfer behavior in Caenorhabditis elegans requires input from the ventral nerve cord.

sli-3 negatively regulates the LET-23/epidermal growth factor receptor-mediated vulval induction pathway in Caenorhabditis elegans.

A C. elegans model of nicotine-dependent behavior: regulation by TRP-family channels.

Optofluidic microscopy--a method for implementing a high resolution optical microscope on a chip.

C. elegans EVI1 proto-oncogene, EGL-43, is necessary for Notch-mediated cell fate specification and regulates cell invasion.

Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest.

An activating mutation in sos-1 identifies its Dbl domain as a critical inhibitor of the epidermal growth factor receptor pathway during Caenorhabditis elegans vulval development.

The tailless ortholog nhr-67 regulates patterning of gene expression and morphogenesis in the C. elegans vulva.

Nematodes, bacteria, and flies: a tripartite model for nematode parasitism.

The versatile worm: genetic and genomic resources for Caenorhabditis elegans research.

Genetic analysis of dauer formation in Caenorhabditis briggsae.

Systems level circuit model of C. elegans undulatory locomotion: mathematical modeling and molecular genetics.

Postembryonic RNAi in Heterorhabditis bacteriophora: a nematode insect parasite and host for insect pathogenic symbionts.

Epidermal growth factor signaling induces behavioral quiescence in Caenorhabditis elegans.

The C. elegans ROR receptor tyrosine kinase, CAM-1, non-autonomously inhibits the Wnt pathway.

WormBase 2007.

Vulval development.

Searching WormBase for information about Caenorhabditis elegans.

Acute carbon dioxide avoidance in Caenorhabditis elegans.

Genomic-bioinformatic analysis of transcripts enriched in the third-stage larva of the parasitic nematode Ascaris suum.

Building a cell and anatomy ontology of Caenorhabditis elegans.

A blend of small molecules regulates both mating and development in Caenorhabditis elegans.

Lensless high-resolution on-chip optofluidic microscopes for Caenorhabditis elegans and cell imaging.

Opposing Wnt pathways orient cell polarity during organogenesis.

Tv-RIO1 - an atypical protein kinase from the parasitic nematode Trichostrongylus vitrinus.

Ror receptor tyrosine kinases: orphans no more.

The neuroscience information framework: a data and knowledge environment for neuroscience.

Textpresso for neuroscience: searching the full text of thousands of neuroscience research papers.

Issues in the design of a pilot concept-based query interface for the neuroinformatics information framework.

Federated access to heterogeneous information resources in the Neuroscience Information Framework (NIF).

Multigenome DNA sequence conservation identifies Hox cis-regulatory elements.

Evolution of a polymodal sensory response network.

The Caenorhabditis elegans vulva: a post-embryonic gene regulatory network controlling organogenesis.

Wnt and EGF pathways act together to induce C. elegans male hook development.

RNA Pol II accumulates at promoters of growth genes during developmental arrest.

A shortcut to identifying small molecule signals that regulate behavior and development in Caenorhabditis elegans.

Predicting phenotypic diversity and the underlying quantitative molecular transitions.

Transcriptomic analysis of the entomopathogenic nematode Heterorhabditis bacteriophora TTO1.

Coordination of opposing sex-specific and core muscle groups regulates male tail posture during Caenorhabditis elegans male mating behavior.

The NK-2 class homeodomain factor CEH-51 and the T-box factor TBX-35 have overlapping function in C. elegans mesoderm development.

Semi-automated curation of protein subcellular localization: a text mining-based approach to Gene Ontology (GO) Cellular Component curation.

Protein kinase VRK-1 regulates cell invasion and EGL-17/FGF signaling in Caenorhabditis elegans.

Structural and functional characterisation of the fork head transcription factor-encoding gene, Hc-daf-16, from the parasitic nematode Haemonchus contortus (Strongylida).

The C. elegans tailless/Tlx homolog nhr-67 regulates a stage-specific program of linker cell migration in male gonadogenesis.

WormBase: a comprehensive resource for nematode research.

Transcriptional profiling of trait deterioration in the insect pathogenic nematode Heterorhabditis bacteriophora.

C. elegans BED domain transcription factor BED-3 controls lineage-specific cell proliferation during organogenesis.

The roles of EGF and Wnt signaling during patterning of the C. elegans Bgamma/delta Equivalence Group.

A comparison of experience-dependent locomotory behaviors and biogenic amine neurons in nematode relatives of Caenorhabditis elegans.

Differences in transcription between free-living and CO2-activated third-stage larvae of Haemonchus contortus.

Re-programming of C. elegans male epidermal precursor fates by Wnt, Hox, and LIN-12/Notch activities.

Massively parallel sequencing and analysis of the Necator americanus transcriptome.

Paired and LIM class homeodomain proteins coordinate differentiation of the C. elegans ALA neuron.

A practical, bioinformatic workflow system for large data sets generated by next-generation sequencing.

Scaffolding a Caenorhabditis nematode genome with RNA-seq.

Receptor-type guanylate cyclase is required for carbon dioxide sensation by Caenorhabditis elegans.

Deep insights into Dictyocaulus viviparus transcriptomes provides unique prospects for new drug targets and disease intervention.

The LIN-15A and LIN-56 transcriptional regulators interact to negatively regulate EGF/Ras signaling in Caenorhabditis elegans vulval cell-fate determination.

Worm Phenotype Ontology: integrating phenotype data within and beyond the C. elegans community.

A sensory code for host seeking in parasitic nematodes.

Ascaroside expression in Caenorhabditis elegans is strongly dependent on diet and developmental stage.

Sensitive and precise quantification of insulin-like mRNA expression in Caenorhabditis elegans.

Toward an interactive article: integrating journals and biological databases.

Transfer characteristics of a thermosensory synapse in Caenorhabditis elegans.

Metazoan operons accelerate recovery from growth-arrested states.

Microfluidic chamber arrays for whole-organism behavior-based chemical screening.

WormBase 2012: more genomes, more data, new website.

Comparative metabolomics reveals biogenesis of ascarosides, a modular library of small-molecule signals in C. elegans.

A modular library of small molecule signals regulates social behaviors in Caenorhabditis elegans.

Automatic categorization of diverse experimental information in the bioscience literature.

An entomopathogenic nematode by any other name.

Ascaroside signaling is widely conserved among nematodes.

Hormonal signal amplification mediates environmental conditions during development and controls an irreversible commitment to adulthood.

The cGMP signaling pathway affects feeding behavior in the necromenic nematode Pristionchus pacificus.

Targeted metabolomics reveals a male pheromone and sex-specific ascaroside biosynthesis in Caenorhabditis elegans.

Entomopathogenic nematodes.

Transcription factor redundancy and tissue-specific regulation: evidence from functional and physical network connectivity.

Olfaction shapes host-parasite interactions in parasitic nematodes.

Nematode-bacterium symbioses--cooperation and conflict revealed in the "omics" age.

Functional transcriptomics of a migrating cell in Caenorhabditis elegans.

Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR.

Wide and scalable field-of-view Talbot-grid-based fluorescence microscopy.

Sex-specific mating pheromones in the nematode Panagrellus redivivus.

Nematode-trapping fungi eavesdrop on nematode pheromones.

Identification of DVA interneuron regulatory sequences in Caenorhabditis elegans.

Origin and evolution of dishevelled.

The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle.

Incorporating genomics into the toolkit of nematology.

Succinylated octopamine ascarosides and a new pathway of biogenic amine metabolism in Caenorhabditis elegans.

Systematic profiling of Caenorhabditis elegans locomotive behaviors reveals additional components in G-protein Gαq signaling.

A lover and a fighter: the genome sequence of an entomopathogenic nematode Heterorhabditis bacteriophora.

FGF signaling regulates Wnt ligand expression to control vulval cell lineage polarity in C. elegans.

Transgene-free genome editing in Caenorhabditis elegans using CRISPR-Cas.

The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus.

WormBase: Annotating many nematode genomes.

WormBase 2014: new views of curated biology.

Multilevel modulation of a sensory motor circuit during C. elegans sleep and arousal.

Genome of the human hookworm Necator americanus.

A modified mole cricket lure and description of Scapteriscus borellii (Orthoptera: Gryllotalpidae) range expansion and calling song in California.

Analysis of the transcriptome of adult Dictyocaulus filaria and comparison with Dictyocaulus viviparus, with a focus on molecules involved in host-parasite interactions.

Microsporidia-nematode associations in methane seeps reveal basal fungal parasitism in the deep sea.

Probing the equatorial groove of the hookworm protein and vaccine candidate antigen, Na-ASP-2.

Structural and functional characterization of the α-tubulin acetyltransferase MEC-17.

Genome and transcriptome of the porcine whipworm Trichuris suis.

Comparative validation of the D. melanogaster modENCODE transcriptome annotation.

The Opisthorchis viverrini genome provides insights into life in the bile duct.

Bioinformatic exploration of RIO protein kinases of parasitic and free-living nematodes.

NilD CRISPR RNA contributes to Xenorhabdus nematophila colonization of symbiotic host nematodes.

BC4GO: a full-text corpus for the BioCreative IV GO task.

Evidence of hermaphroditism and sex ratio distortion in the fungal feeding nematode Bursaphelenchus okinawaensis.

Controlled sumoylation of the mevalonate pathway enzyme HMGS-1 regulates metabolism during aging.

Archaerhodopsin variants with enhanced voltage-sensitive fluorescence in mammalian and Caenorhabditis elegans neurons.

Spatial and molecular cues for cell outgrowth during C. elegans uterine development.

Transgene-free genome editing by germline injection of CRISPR/Cas RNA.

LINKIN, a new transmembrane protein necessary for cell adhesion.

Communication between oocytes and somatic cells regulates volatile pheromone production in Caenorhabditis elegans.

Hierarchical sparse coding in the sensory system of Caenorhabditis elegans.

Genetic blueprint of the zoonotic pathogen Toxocara canis.

Cell-specific proteomic analysis in Caenorhabditis elegans.

The genome and transcriptome of the zoonotic hookworm Ancylostoma ceylanicum identify infection-specific gene families.

Flatworms have lost the right open reading frame kinase 3 gene during evolution.

Cracking the nodule worm code advances knowledge of parasite biology and biotechnology to tackle major diseases of livestock.

Morphologically defined sub-stages of C. elegans vulval development in the fourth larval stage.

Conserved nematode signalling molecules elicit plant defenses and pathogen resistance.

Genetically Encoded Spy Peptide Fusion System to Detect Plasma Membrane-Localized Proteins In Vivo.

The barber's pole worm CAP protein superfamily--A basis for fundamental discovery and biotechnology advances.

Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks.

Sex Attraction and Mating in Bursaphelenchus okinawaensis and B. xylophilus.

WormBase 2016: expanding to enable helminth genomic research.

Defining the Schistosoma haematobium kinome enables the prediction of essential kinases as anti-schistosome drug targets.

The Haemonchus contortus kinome--a resource for fundamental molecular investigations and drug discovery.

Phylogenomic and biogeographic reconstruction of the Trichinella complex.

Reconstruction of the insulin-like signalling pathway of Haemonchus contortus.

Dictyocaulus viviparus genome, variome and transcriptome elucidate lungworm biology and support future intervention.

Muscle Logic: New Knowledge Resource for Anatomy Enables Comprehensive Searches of the Literature on the Feeding Muscles of Mammals.

Contrasting responses within a single neuron class enable sex-specific attraction in Caenorhabditis elegans.

CAP protein superfamily members in Toxocara canis.

Analyses of Compact Trichinella Kinomes Reveal a MOS-Like Protein Kinase with a Unique N-Terminal Domain.

C. elegans Stress-Induced Sleep Emerges from the Collective Action of Multiple Neuropeptides.

Tissue enrichment analysis for C. elegans genomics.

The tubulin repertoire of C. elegans sensory neurons and its context-dependent role in process outgrowth.

Mapping a multiplexed zoo of mRNA expression.

Enhancer Sharing Promotes Neighborhoods of Transcriptional Regulation Across Eukaryotes.

cGAL, a temperature-robust GAL4-UAS system for Caenorhabditis elegans.

Nematophagous fungus Arthrobotrys oligospora mimics olfactory cues of sex and food to lure its nematode prey.

In Retrospect: Forty years of cellular clues from worms.

Biosynthesis of Modular Ascarosides in C. elegans.

Improved Synthesis for Modular Ascarosides Uncovers Biological Activity.

Whipworm kinomes reflect a unique biology and adaptation to the host animal.

Deguelin exerts potent nematocidal activity the mitochondrial respiratory chain.

The Jellyfish Cassiopea Exhibits a Sleep-like State.

WormBase 2017: molting into a new stage.

Genome-wide discovery of active regulatory elements and transcription factor footprints in using DNase-seq.

FMRFamide-like peptides expand the behavioral repertoire of a densely connected nervous system.

Non-neuronal cell outgrowth in .

A Toolkit of Engineered Recombinational Balancers in C. elegans.

Metabolomic "Dark Matter" Dependent on Peroxisomal β-Oxidation in Caenorhabditis elegans.

Reconstructing a metazoan genetic pathway with transcriptome-wide epistasis measurements.

Split cGAL, an intersectional strategy using a split intein for refined spatiotemporal transgene control in .

Micropublication: incentivizing community curation and placing unpublished data into the public domain.

Using Transcriptomes as Mutant Phenotypes Reveals Functional Regions of a Mediator Subunit in .

An Efficient Genome Editing Strategy To Generate Putative Null Mutants in Using CRISPR/Cas9.

Opening up a large can of worms.

Comparative Epigenomics Reveals that RNA Polymerase II Pausing and Chromatin Domain Organization Control Nematode piRNA Biogenesis.

Autism-associated missense genetic variants impact locomotion and neurodevelopment in Caenorhabditis elegans.

Genetic markers enable the verification and manipulation of the dauer entry decision.

Newly Identified Nematodes from Mono Lake Exhibit Extreme Arsenic Resistance.

WormBase: a modern Model Organism Information Resource.

Text mining meets community curation: a newly designed curation platform to improve author experience and participation at WormBase.

Elucidating the molecular and developmental biology of parasitic nematodes: Moving to a multiomics paradigm.

Predicting gene essentiality in by feature engineering and machine-learning.

PIEZO channel coordinates multiple reproductive tissues to govern ovulation.

AF4/FMR2 Family Homolog Regulates Heat-Shock-Induced Gene Expression.

RNA Pol II Length and Disorder Enable Cooperative Scaling of Transcriptional Bursting.

is a novel allele of .

2018 Update on Protein-Protein Interaction Data in WormBase.

Application of the red-shifted channel rhodopsin Chrimson for the cGAL bipartite system.

Genome editing of using CRISPR/Cas9 co-conversion marker .

The role of in vulval cell lineage polarity.

Effects of ASD-associated /PTEN missense variants on dauer development.

Vennter - An interactive analysis tool for WormBase interaction data using Venn diagrams.

Automated generation of gene summaries at the Alliance of Genome Resources.

Release and targeting of polycystin-2-carrying ciliary extracellular vesicles.

Signaling by AWC Olfactory Neurons Is Necessary for ' Response to Prenol, an Odor Associated with Nematode-Infected Insects.

Modular metabolite assembly in depends on carboxylesterases and formation of lysosome-related organelles.

Autonomous adaptive data acquisition for scanning hyperspectral imaging.

Extrasynaptic acetylcholine signaling through a muscarinic receptor regulates cell migration.

Conserved missense variant in ortholog impairs fecundity in .

Wormicloud: a new text summarization tool based on word clouds to explore the C. elegans literature.

CYK-1/Formin activation in cortical RhoA signaling centers promotes organismal left-right symmetry breaking.

Transcriptional Response to a Dauer-Inducing Ascaroside Cocktail in Late L1 in .

A Mutation of in .

Combinatorial Assembly of Modular Glucosides via Carboxylesterases Regulates Starvation Survival.

A conserved behavioral role for a nematode interneuron neuropeptide receptor.

The entomopathogenic nematode Steinernema hermaphroditum is a self-fertilizing hermaphrodite and a genetically tractable system for the study of parasitic and mutualistic symbiosis.

Formation and function of dauer ascarosides in the nematodes Caenorhabditis briggsae and Caenorhabditis elegans.

WormBase in 2022-data, processes, and tools for analyzing Caenorhabditis elegans.

Nematode ascarosides attenuate mammalian type 2 inflammatory responses.

DiI staining of sensory neurons in the entomopathogenic nematode .

Both entry to and exit from diapause arrest in Caenorhabditis elegans are regulated by a steroid hormone pathway.

Interneuron control of C. elegans developmental decision-making.

Genome annotation of Caenorhabditis briggsae by TEC-RED identifies new exons, paralogs, and conserved and novel operons.

Possible stochastic sex determination in Bursaphelenchus nematodes.

Loss of FAM136A results in minor locomotion and behavioral changes in .

Brain-wide bidirectional neuropeptide modulation of individual neuron classes regulates a developmental decision.

and mechanosensors are involved in mating behavior in .

LINKIN-associated proteins necessary for tissue integrity during collective cell migration.

Transcriptomic profiling of sex-specific olfactory neurons reveals subset-specific receptor expression in Caenorhabditis elegans.

Differential processing of a chemosensory cue across life stages sharing the same valence state in .

Semantic Representation of Neural Circuit Knowledge in .

Single-nucleus resolution mapping of the adult C. elegans and its application to elucidate inter- and trans-generational response to alcohol.

Body stiffness is a mechanical property that facilitates contact-mediated mate recognition in Caenorhabditis elegans.

The alliance of genome resources: transforming comparative genomics.

Fluorescence dynamics of lysosomal-related organelle flashing in the intestinal cells of .

Semantic representation of neural circuit knowledge in Caenorhabditis elegans.

Molecular identification of a peroxidase gene controlling body size in the entomopathogenic nematode Steinernema hermaphroditum.

Distinct neurogenetic mechanisms establish the same chemosensory valence state at different life stages in Caenorhabditis elegans.

A cGAL-UAS bipartite expression toolkit for sensory neurons.

AI-aided geometric design of anti-infection catheters.

An improved solid medium-based culturing method for .

Enrichment on steps, not genes, improves inference of differentially expressed pathways.

WormBase 2024: status and transitioning to Alliance infrastructure.

Sensory integration of food availability and population density during the diapause exit decision involves insulin-like signaling in .

Perspectives on tracking data reuse across biodata resources.

Correction: Semantic representation of neural circuit knowledge in Caenorhabditis elegans.

Single-tissue proteomics in reveals proteins resident in intestinal lysosome-related organelles.

Expanding automated gene summaries for and parasitic nematode species in WormBase.