Blaz Zupan

GenePath: a system for automated construction of genetic networks from mutant data.

GenePath: a system for inference of genetic networks and proposal of genetic experiments.

Microarray data mining with visual programming.

VizRank: finding informative data projections in functional genomics by machine learning.

Epistasis analysis with global transcriptional phenotypes.

TA-clustering: cluster analysis of gene expression profiles through Temporal Abstractions.

GenePath: from mutations to genetic networks and back.

Developmentally regulated DNA methylation in Dictyostelium discoideum.

Knowledge-based data analysis and interpretation.

Predictive data mining in clinical medicine: current issues and guidelines.

Predictive model for estimating risk of crush syndrome: a data mining approach.

FreeViz--an intelligent multivariate visualization approach to explorative analysis of biomedical data.

Visualization-based cancer microarray data classification analysis.

Towards knowledge-based gene expression data mining.

Open-source tools for data mining.

dictyBase--a Dictyostelium bioinformatics resource update.

Polymorphic members of the lag gene family mediate kin discrimination in Dictyostelium.

Report on EU-USA workshop: how systems biology can advance cancer research (27 October 2008).

dictyExpress: a Dictyostelium discoideum gene expression database with an explorative data analysis web-based interface.

Does replication groups scoring reduce false positive rate in SNP interaction discovery?

Conserved developmental transcriptomes in evolutionarily divergent species.

New components of the Dictyostelium PKA pathway revealed by Bayesian analysis of expression data.

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution.

Inference of the molecular mechanism of action from genetic interaction and gene expression data.

Text Mining approaches for automated literature knowledge extraction and representation.

FragViz: visualization of fragmented networks.

Biomechanical and clinical alterations of the hip joint following femoral neck fracture and implantation of bipolar hip endoprosthesis.

iCLIP predicts the dual splicing effects of TIA-RNA interactions.

Characterizing the RNA targets and position-dependent splicing regulation by TDP-43.

SNPsyn: detection and exploration of SNP-SNP interactions.

miR669a and miR669q prevent skeletal muscle differentiation in postnatal cardiac progenitors.

Stage prediction of embryonic stem cell differentiation from genome-wide expression data.

BzpF is a CREB-like transcription factor that regulates spore maturation and stability in Dictyostelium.

Analysis of alternative splicing associated with aging and neurodegeneration in the human brain.