Faculty of Life and Environmental Sciences,
Microbiology Research Center for Sustainability
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Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms.
Nature communications Apr, 2016 | Pubmed ID: 27075392
Cloning and sequencing of a poly(DL-lactic acid) depolymerase gene from Paenibacillus amylolyticus strain TB-13 and its functional expression in Escherichia coli.
Applied and environmental microbiology May, 2003 | Pubmed ID: 12732514
Enhancement of the mexAB-oprM efflux pump expression by a quorum-sensing autoinducer and its cancellation by a regulator, MexT, of the mexEF-oprN efflux pump operon in Pseudomonas aeruginosa.
Antimicrobial agents and chemotherapy Apr, 2004 | Pubmed ID: 15047536
A quorum-sensing autoinducer enhances the mexAB-oprM efflux-pump expression without the MexR-mediated regulation in Pseudomonas aeruginosa.
Microbiology and immunology , 2004 | Pubmed ID: 15215631
De-repression and comparison of oil-water separation activity of the dibenzothiophene desulfurizing bacterium, Mycobacterium sp. G3.
Biotechnology letters Jun, 2005 | Pubmed ID: 16086250
Cloning and sequence analysis of poly(tetramethylene succinate) depolymerase from Acidovorax delafieldii strain BS-3.
Journal of bioscience and bioengineering , 2002 | Pubmed ID: 16233195
A simple screening procedure for heterotrophic nitrifying bacteria with oxygen-tolerant denitrification activity.
Journal of bioscience and bioengineering , 2003 | Pubmed ID: 16233429
Matrix metalloproteinase-2 inhibition and Zn2+-chelating activities of pyoverdine-type siderophores.
Journal of bioscience and bioengineering , 2004 | Pubmed ID: 16233629
Identification and functional analysis of genes required for desulfurization of alkyl dibenzothiophenes of Mycobacterium sp. G3.
Journal of bioscience and bioengineering Oct, 2005 | Pubmed ID: 16310728
Purification and Properties of a Polyester Polyurethane-Degrading Enzyme from Comamonas acidovorans TB-35.
Applied and environmental microbiology Jan, 1998 | Pubmed ID: 16349494
Comparison of Vibrio harveyi strains isolated from shrimp farms and from culture collection in terms of toxicity and antibiotic resistance.
FEMS microbiology letters May, 2006 | Pubmed ID: 16640572
Quorum sensing regulates denitrification in Pseudomonas aeruginosa PAO1.
Journal of bacteriology Jul, 2007 | Pubmed ID: 17449629
Opr86 is essential for viability and is a potential candidate for a protective antigen against biofilm formation by Pseudomonas aeruginosa.
Journal of bacteriology Jun, 2008 | Pubmed ID: 18390657
Identification and characterization of novel poly(DL-lactic acid) depolymerases from metagenome.
Applied microbiology and biotechnology Jul, 2008 | Pubmed ID: 18461319
Development of a novel biofilm continuous culture method for simultaneous assessment of architecture and gaseous metabolite production.
Applied and environmental microbiology Sep, 2008 | Pubmed ID: 18606794
Influence of the Pseudomonas quinolone signal on denitrification in Pseudomonas aeruginosa.
Journal of bacteriology Dec, 2008 | Pubmed ID: 18931133
Treatment of mouse melanoma cells with phorbol 12-myristate 13-acetate counteracts mannosylerythritol lipid-induced growth arrest and apoptosis.
Cytotechnology Jul, 2000 | Pubmed ID: 19002819
Mannosylerythritol lipid increases levels of galactoceramide in and neurite outgrowth from PC12 pheochromocytoma cells.
Cytotechnology Jul, 2000 | Pubmed ID: 19002832
Induction of the differentiation of human HL-60 promyelocytic leukemia cell line by succinoyl trehalose lipids.
Cytotechnology Jul, 2000 | Pubmed ID: 19002834
Structural characterization and surface-active properties of a succinoyl trehalose lipid produced by Rhodococcus sp. SD-74.
Journal of oleo science , 2009 | Pubmed ID: 19145064
Outer membrane machinery and alginate synthesis regulators control membrane vesicle production in Pseudomonas aeruginosa.
Journal of bacteriology Dec, 2009 | Pubmed ID: 19837799
Rapid monomerization of poly(butylene succinate)-co-(butylene adipate) by Leptothrix sp.
Journal of bioscience and bioengineering Dec, 2009 | Pubmed ID: 19914585
Bicyclic compounds repress membrane vesicle production and Pseudomonas quinolone signal synthesis in Pseudomonas aeruginosa.
FEMS microbiology letters Mar, 2010 | Pubmed ID: 20146747
Variation of physiochemical properties and cell association activity of membrane vesicles with growth phase in Pseudomonas aeruginosa.
Applied and environmental microbiology Jun, 2010 | Pubmed ID: 20382806
Bacterial growth monitoring in a microfluidic device by confocal reflection microscopy.
Journal of bioscience and bioengineering Jul, 2010 | Pubmed ID: 20541131
Monitoring biofilm development in a microfluidic device using modified confocal reflection microscopy.
Journal of bioscience and bioengineering Sep, 2010 | Pubmed ID: 20547370
Assimilative and co-metabolic degradation of chloral hydrate by bacteria and their bioremediation potential.
Journal of bioscience and bioengineering Apr, 2011 | Pubmed ID: 21220209
Characterization of phospholipids in membrane vesicles derived from Pseudomonas aeruginosa.
Bioscience, biotechnology, and biochemistry , 2011 | Pubmed ID: 21389607
Continuous monitoring of ammonia removal activity and observation of morphology of microbial complexes in a microdevice.
Applied and environmental microbiology Jun, 2011 | Pubmed ID: 21515728
The Response of Pseudomonas aeruginosa PAO1 Efflux Pump-Defective Mutants to N-Octanoyl-L-Homoserine Lactone.
Microbes and environments , 2009 | Pubmed ID: 21566394
The effect of a cell-to-cell communication molecule, Pseudomonas quinolone signal (PQS), produced by P. aeruginosa on other bacterial species.
Microbes and environments , 2010 | Pubmed ID: 21576845
Visualizing the effects of biofilm structures on the influx of fluorescent material using combined confocal reflection and fluorescent microscopy.
Microbes and environments , 2010 | Pubmed ID: 21576853
Pseudomonas quinolone signal affects membrane vesicle production in not only gram-negative but also gram-positive bacteria.
Microbes and environments , 2010 | Pubmed ID: 21576862
Seasonal change in methanotrophic diversity and populations in a rice field soil assessed by DNA-stable isotope probing and quantitative real-time PCR.
Microbes and environments , 2010 | Pubmed ID: 21576868
Multifunctional membrane vesicles in Pseudomonas aeruginosa.
Environmental microbiology Jun, 2012 | Pubmed ID: 22103313
Group X aldehyde dehydrogenases of Pseudomonas aeruginosa PAO1 degrade hydrazones.
Journal of bacteriology Mar, 2012 | Pubmed ID: 22267508
Case study of the relationship between fungi and bacteria associated with high-molecular-weight polycyclic aromatic hydrocarbon degradation.
Journal of bioscience and bioengineering May, 2012 | Pubmed ID: 22305589
Social Behaviours under Anaerobic Conditions in Pseudomonas aeruginosa.
International journal of microbiology , 2012 | Pubmed ID: 22518142
Cultivation-independent identification of candidate dehalorespiring bacteria in tetrachloroethylene degradation.
Environmental science & technology Jul, 2012 | Pubmed ID: 22708499
A microfluidic microbial culture device for rapid determination of the minimum inhibitory concentration of antibiotics.
The Analyst Feb, 2013 | Pubmed ID: 23289096
Interspecies interaction between Pseudomonas aeruginosa and other microorganisms.
Microbes and environments , 2013 | Pubmed ID: 23363620
Structural requirement in Clostridium perfringens collagenase mRNA 5' leader sequence for translational induction through small RNA-mRNA base pairing.
Journal of bacteriology Jun, 2013 | Pubmed ID: 23585542
Dechlorination of chloral hydrate is influenced by the biofilm adhesin protein LapA in Pseudomonas putida LF54.
Applied and environmental microbiology Jul, 2013 | Pubmed ID: 23603683
Three-dimensional visualization of mixed species biofilm formation together with its substratum.
Microbiology and immunology Aug, 2013 | Pubmed ID: 23647374
The impact of anaerobiosis on strain-dependent phenotypic variations in Pseudomonas aeruginosa.
Bioscience, biotechnology, and biochemistry , 2013 | Pubmed ID: 23924741
Analysis of genes for succinoyl trehalose lipid production and increasing production in Rhodococcus sp. strain SD-74.
Applied and environmental microbiology Nov, 2013 | Pubmed ID: 24038682
Membrane vesicle formation is associated with pyocin production under denitrifying conditions in Pseudomonas aeruginosa PAO1.
Environmental microbiology Sep, 2014 | Pubmed ID: 24112564
SP10 infectivity is aborted after bacteriophage SP10 infection induces nonA transcription on the prophage SPβ region of the Bacillus subtilis genome.
Journal of bacteriology Feb, 2014 | Pubmed ID: 24272782
A sporulation factor is involved in the morphological change of Clostridium perfringens biofilms in response to temperature.
Journal of bacteriology Apr, 2014 | Pubmed ID: 24509316
cAMP signaling affects irreversible attachment during biofilm formation by Pseudomonas aeruginosa PAO1.
Microbes and environments , 2014 | Pubmed ID: 24553108
A novel approach for purification and selective capture of membrane vesicles of the periodontopathic bacterium, Porphyromonas gingivalis: membrane vesicles bind to magnetic beads coated with epoxy groups in a noncovalent, species-specific manner.
PloS one , 2014 | Pubmed ID: 24830438
Mucin 3 is involved in intestinal epithelial cell apoptosis via N-(3-oxododecanoyl)-L-homoserine lactone-induced suppression of Akt phosphorylation.
American journal of physiology. Cell physiology Jul, 2014 | Pubmed ID: 24848113
Low concentrations of ethanol stimulate biofilm and pellicle formation in Pseudomonas aeruginosa.
Bioscience, biotechnology, and biochemistry , 2014 | Pubmed ID: 25036502
cbb3-type cytochrome c oxidases, aerobic respiratory enzymes, impact the anaerobic life of Pseudomonas aeruginosa PAO1.
Journal of bacteriology Nov, 2014 | Pubmed ID: 25182494
Physiological levels of nitrate support anoxic growth by denitrification of Pseudomonas aeruginosa at growth rates reported in cystic fibrosis lungs and sputum.
Frontiers in microbiology , 2014 | Pubmed ID: 25386171
Inhibition of Pseudomonas aeruginosa swarming motility by 1-naphthol and other bicyclic compounds bearing hydroxyl groups.
Applied and environmental microbiology Apr, 2015 | Pubmed ID: 25681177
The Pseudomonas Quinolone Signal Inhibits Biofilm Development of Streptococcus mutans.
Microbes and environments , 2015 | Pubmed ID: 25854411
Environmental factors that shape biofilm formation.
Bioscience, biotechnology, and biochemistry , 2016 | Pubmed ID: 26103134
Bacterial membrane vesicles, an overlooked environmental colloid: Biology, environmental perspectives and applications.
Advances in colloid and interface science Dec, 2015 | Pubmed ID: 26422802
Effects of carbazole-degradative plasmid pCAR1 on biofilm morphology in Pseudomonas putida KT2440.
Environmental microbiology reports Apr, 2016 | Pubmed ID: 26743211
Role of RNase Y in Clostridium perfringens mRNA Decay and Processing.
Journal of bacteriology 01, 2017 | Pubmed ID: 27821608
Influence of the alginate production on cell-to-cell communication in Pseudomonas aeruginosa PAO1.
Environmental microbiology reports 06, 2017 | Pubmed ID: 28120378
Biofilm formation by Paracoccus denitrificans requires a type I secretion system-dependent adhesin BapA.
FEMS microbiology letters 02, 2017 | Pubmed ID: 28158695
Immunoactive Clostridial Membrane Vesicle Production Is Regulated by a Sporulation Factor.
Infection and immunity 05, 2017 | Pubmed ID: 28223348
Membrane vesicle-mediated bacterial communication.
The ISME journal 06, 2017 | Pubmed ID: 28282039
A Versatile and Rapidly Deployable Device to Enable Spatiotemporal Observations of the Sessile Microbes and Environmental Surfaces.
Microbes and environments Mar, 2017 | Pubmed ID: 28321008
Prophage-triggered membrane vesicle formation through peptidoglycan damage in Bacillus subtilis.
Nature communications 09, 2017 | Pubmed ID: 28883390
What will membrane vesicles (MVs) bring to bacterial communication?
Microbes and environments , 2017 | Pubmed ID: 28954979
Salicylic Acid and Jasmonic Acid Pathways are Activated in Spatially Different Domains Around the Infection Site During Effector-Triggered Immunity in Arabidopsis thaliana.
Plant & cell physiology Jan, 2018 | Pubmed ID: 29177423
Interplay of a non-conjugative integrative element and a conjugative plasmid in the spread of antibiotic resistance via suicidal plasmid transfer from an aquaculture Vibrio isolate.
PloS one , 2018 | Pubmed ID: 29879198
Paracoccus denitrificans can utilize various long-chain N-acyl homoserine lactones and sequester them in membrane vesicles.
Environmental microbiology reports 12, 2018 | Pubmed ID: 29968275
Types and origins of bacterial membrane vesicles.
Nature reviews. Microbiology 01, 2019 | Pubmed ID: 30397270
Spatial Distribution and Chemical Tolerance of Streptococcus mutans within Dual-Species Cariogenic Biofilms.
Microbes and environments Dec, 2018 | Pubmed ID: 30531153
Point Mutations Lead to Increased Levels of c-di-GMP and Phenotypic Changes to the Colony Biofilm Morphology in Alcanivorax borkumensis SK2.
Microbes and environments Mar, 2019 | Pubmed ID: 30773505
Intra- and Interspecies Variability of Single-Cell Innate Fluorescence Signature of Microbial Cell.
Applied and environmental microbiology Sep, 2019 | Pubmed ID: 31324624
Process Description of an Unconventional Biofilm Formation by Bacterial Cells Autoagglutinating through Sticky, Long, and Peritrichate Nanofibers.
Environmental science & technology 02, 2020 | Pubmed ID: 31972092
Peculiarities of biofilm formation by Paracoccus denitrificans.
Applied microbiology and biotechnology Mar, 2020 | Pubmed ID: 32002601
Cracking Open Bacterial Membrane Vesicles.
Frontiers in microbiology , 2019 | Pubmed ID: 32038523
Biofilms: hot spots of horizontal gene transfer (HGT) in aquatic environments, with a focus on a new HGT mechanism.
FEMS microbiology ecology May, 2020 | Pubmed ID: 32109282
Involvement of membrane vesicles in long-chain-AHL delivery in Paracoccus species.
Environmental microbiology reports Jun, 2020 | Pubmed ID: 32291967
Biofilm Formation by Streptococcus mutans is Enhanced by Indole via the Quorum Sensing Pathway.
Microbes and environments , 2020 | Pubmed ID: 32350164
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