Department of Geoscience
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An improved medium for the anaerobic growth of Paracoccus denitrificans Pd1222.
Frontiers in microbiology , 2014 | Pubmed ID: 24550891
Recoding of the stop codon UGA to glycine by a BD1-5/SN-2 bacterium and niche partitioning between Alpha- and Gammaproteobacteria in a tidal sediment microbial community naturally selected in a laboratory chemostat.
Frontiers in microbiology , 2014 | Pubmed ID: 24904545
Nitrogen cycling. The environmental controls that govern the end product of bacterial nitrate respiration.
Science (New York, N.Y.) Aug, 2014 | Pubmed ID: 25104387
Rapid recovery of cyanobacterial pigments in desiccated biological soil crusts following addition of water.
PloS one , 2014 | Pubmed ID: 25375172
Anaerobic digestion of the microalga Spirulina at extreme alkaline conditions: biogas production, metagenome, and metatranscriptome.
Frontiers in microbiology , 2015 | Pubmed ID: 26157422
Metagenome from a Spirulina digesting biogas reactor: analysis via binning of contigs and classification of short reads.
BMC microbiology Dec, 2015 | Pubmed ID: 26680455
Use of highly alkaline conditions to improve cost-effectiveness of algal biotechnology.
Applied microbiology and biotechnology Feb, 2016 | Pubmed ID: 26691517
Selective Pressure of Temperature on Competition and Cross-Feeding within Denitrifying and Fermentative Microbial Communities.
Frontiers in microbiology , 2015 | Pubmed ID: 26779132
Metagenomic Analysis Indicates Epsilonproteobacteria as a Potential Cause of Microbial Corrosion in Pipelines Injected with Bisulfite.
Frontiers in microbiology , 2016 | Pubmed ID: 26858705
Haloalkaline Bioconversions for Methane Production from Microalgae Grown on Sunlight.
Trends in biotechnology Jun, 2016 | Pubmed ID: 26968613
Environmental Breviatea harbour mutualistic Arcobacter epibionts.
Nature 06, 2016 | Pubmed ID: 27279223
Impacts of chemical gradients on microbial community structure.
The ISME journal 04, 2017 | Pubmed ID: 28094795
Syntrophic linkage between predatory Carpediemonas and specific prokaryotic populations.
The ISME journal 05, 2017 | Pubmed ID: 28211847
Robust, high-productivity phototrophic carbon capture at high pH and alkalinity using natural microbial communities.
Biotechnology for biofuels , 2017 | Pubmed ID: 28367229
Fast and Simple Analysis of MiSeq Amplicon Sequencing Data with MetaAmp.
Frontiers in microbiology , 2017 | Pubmed ID: 28824589
Transient exposure to oxygen or nitrate reveals ecophysiology of fermentative and sulfate-reducing benthic microbial populations.
Environmental microbiology Dec, 2017 | Pubmed ID: 28836729
Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software.
Nature methods Nov, 2017 | Pubmed ID: 28967888
Biofilm-based photobioreactors: their design and improving productivity through efficient supply of dissolved inorganic carbon.
FEMS microbiology letters Dec, 2017 | Pubmed ID: 29069404
Assessing species biomass contributions in microbial communities via metaproteomics.
Nature communications 11, 2017 | Pubmed ID: 29146960
Designer microbiomes for environmental, energy and health biotechnology.
Current opinion in microbiology 06, 2018 | Pubmed ID: 29366937
Metaproteomics method to determine carbon sources and assimilation pathways of species in microbial communities.
Proceedings of the National Academy of Sciences of the United States of America 06, 2018 | Pubmed ID: 29844191
Comparative Proteomics of Three Species of Ammonia-Oxidizing Bacteria.
Frontiers in microbiology , 2018 | Pubmed ID: 29867847
The rates and players of denitrification, dissimilatory nitrate reduction to ammonia (DNRA) and anaerobic ammonia oxidation (anammox) in mangrove soils.
Anais da Academia Brasileira de Ciencias , 2019 | Pubmed ID: 30379272
Role of Extracellular Carbonic Anhydrase in Dissolved Inorganic Carbon Uptake in Alkaliphilic Phototrophic Biofilm.
Frontiers in microbiology , 2018 | Pubmed ID: 30405559
More Is Not Always Better: Evaluation of 1D and 2D-LC-MS/MS Methods for Metaproteomics.
Frontiers in microbiology , 2019 | Pubmed ID: 30837968
Direct capture and conversion of CO from air by growing a cyanobacterial consortium at pH up to 11.2.
Biotechnology and bioengineering 07, 2019 | Pubmed ID: 30906982
The Effect of Dissimilatory Manganese Reduction on Lactate Fermentation and Microbial Community Assembly.
Frontiers in microbiology , 2019 | Pubmed ID: 31156573
A shared core microbiome in soda lakes separated by large distances.
Nature communications 09, 2019 | Pubmed ID: 31530813
An Integrated Pipeline for Annotation and Visualization of Metagenomic Contigs.
Frontiers in genetics , 2019 | Pubmed ID: 31681429
Worm expulsion is independent of alterations in composition of the colonic bacteria that occur during experimental -infection in mice.
Gut microbes 05, 2020 | Pubmed ID: 31928118
Methane oxidation and methylotroph population dynamics in groundwater mesocosms.
Environmental microbiology 04, 2020 | Pubmed ID: 32017377
Computational approaches in viral ecology.
Computational and structural biotechnology journal , 2020 | Pubmed ID: 32670501
Strain AB-CW3, a Proteolytic Bacterium From Hypersaline Soda Lakes That Preys on Cells of Gram-Positive Bacteria.
Frontiers in microbiology , 2020 | Pubmed ID: 33281797
Degradation of biological macromolecules supports uncultured microbial populations in Guaymas Basin hydrothermal sediments.
The ISME journal Jun, 2021 | Pubmed ID: 34112968
Methane-dependent selenate reduction by a bacterial consortium.
The ISME journal Jun, 2021 | Pubmed ID: 34183781
Denitrification and dissimilatory nitrate reduction to ammonia in long-term lake sediment microcosms with iron(II).
The Science of the total environment Oct, 2021 | Pubmed ID: 34627917
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