Department of Systems Biology
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Roundup: a multi-genome repository of orthologs and evolutionary distances.
Bioinformatics (Oxford, England) Aug, 2006 | Pubmed ID: 16777906
Rapidly retargetable approaches to de-identification in medical records.
Journal of the American Medical Informatics Association : JAMIA , 2007 | Pubmed ID: 17600096
Resveratrol delays age-related deterioration and mimics transcriptional aspects of dietary restriction without extending life span.
Cell metabolism Aug, 2008 | Pubmed ID: 18599363
Effects of temperature on gene expression in embryos of the coral Montastraea faveolata.
BMC genomics Dec, 2009 | Pubmed ID: 20030803
A method and server for predicting damaging missense mutations.
Nature methods Apr, 2010 | Pubmed ID: 20354512
Remodeling of the metabolome during early frog development.
PloS one Feb, 2011 | Pubmed ID: 21347444
Mapping gene expression in two Xenopus species: evolutionary constraints and developmental flexibility.
Developmental cell Apr, 2011 | Pubmed ID: 21497761
Toward an unbiased evolutionary platform for unraveling Xenopus developmental gene networks.
Genesis (New York, N.Y. : 2000) Mar, 2012 | Pubmed ID: 21956895
Genome sequencing reveals insights into physiology and longevity of the naked mole rat.
Nature Nov, 2011 | Pubmed ID: 21993625
A public resource facilitating clinical use of genomes.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2012 | Pubmed ID: 22797899
Vascular disrupting agent drug classes differ in effects on the cytoskeleton.
PloS one , 2012 | Pubmed ID: 22848372
Accurate multiplexed proteomics at the MS2 level using the complement reporter ion cluster.
Analytical chemistry Nov, 2012 | Pubmed ID: 23098179
Exploiting polypharmacology for drug target deconvolution.
Proceedings of the National Academy of Sciences of the United States of America Apr, 2014 | Pubmed ID: 24707051
Resveratrol prevents high fat/sucrose diet-induced central arterial wall inflammation and stiffening in nonhuman primates.
Cell metabolism Jul, 2014 | Pubmed ID: 24882067
Deep proteomics of the Xenopus laevis egg using an mRNA-derived reference database.
Current biology : CB Jul, 2014 | Pubmed ID: 24954049
A noncanonical Frizzled2 pathway regulates epithelial-mesenchymal transition and metastasis.
Cell Nov, 2014 | Pubmed ID: 25417160
Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.
Cell May, 2015 | Pubmed ID: 26000487
The Nuclear Proteome of a Vertebrate.
Current biology : CB Oct, 2015 | Pubmed ID: 26441354
On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development.
Developmental cell Nov, 2015 | Pubmed ID: 26555057
Hemichordate genomes and deuterostome origins.
Nature Nov, 2015 | Pubmed ID: 26580012
Luteinizing Hormone is an effective replacement for hCG to induce ovulation in Xenopus.
Developmental biology Jun, 2017 | Pubmed ID: 27263125
Integration of mtDNA pseudogenes into the nuclear genome coincides with speciation of the human genus. A hypothesis.
Mitochondrion May, 2017 | Pubmed ID: 27979772
A Tissue-Mapped Axolotl De Novo Transcriptome Enables Identification of Limb Regeneration Factors.
Cell reports Jan, 2017 | Pubmed ID: 28099853
Transcriptomic insights into genetic diversity of protein-coding genes in X. laevis.
Developmental biology Apr, 2017 | Pubmed ID: 28283406
Data on the time of integration of the human mitochondrial pseudogenes (NUMTs) into the nuclear genome.
Data in brief Aug, 2017 | Pubmed ID: 28702491
Proteomics of phosphorylation and protein dynamics during fertilization and meiotic exit in the egg.
Proceedings of the National Academy of Sciences of the United States of America Dec, 2017 | Pubmed ID: 29183978
The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution.
Science (New York, N.Y.) Jun, 2018 | Pubmed ID: 29700227
Bayesian Confidence Intervals for Multiplexed Proteomics Integrate Ion-statistics with Peptide Quantification Concordance.
Molecular & cellular proteomics : MCP Oct, 2019 | Pubmed ID: 31311848
Bioinformatics Screening of Genes Specific for Well-Regenerating Vertebrates Reveals c-answer, a Regulator of Brain Development and Regeneration.
Cell reports Oct, 2019 | Pubmed ID: 31644900
Quantitative Proteomics Reveals Remodeling of Protein Repertoire Across Life Phases of Daphnia pulex.
Proteomics Dec, 2019 | Pubmed ID: 31697011
YAP regulates cell size and growth dynamics via non-cell autonomous mediators.
eLife Jan, 2020 | Pubmed ID: 31913124
A cell type annotation Jamboree-Revival of а communal science forum.
Genesis (New York, N.Y. : 2000) Sep, 2020 | Pubmed ID: 32584459
Computationally enhanced quantitative phase microscopy reveals autonomous oscillations in mammalian cell growth.
Proceedings of the National Academy of Sciences of the United States of America Nov, 2020 | Pubmed ID: 33087574
Lack of age-related respiratory changes in Daphnia.
Biogerontology Feb, 2022 | Pubmed ID: 34989913
Intelligent high-throughput intervention testing platform in Daphnia.
Aging cell Mar, 2022 | Pubmed ID: 35195332
Mitochondrial Pseudogenes Suggest Repeated Inter-Species Hybridization among Direct Human Ancestors.
Genes May, 2022 | Pubmed ID: 35627195
Developing immortal cell lines from embryos four novel cell lines derived from .
Open biology Jul, 2022 | Pubmed ID: 35857907
Rapamycin treatment during development extends life span and health span of male mice and .
Science advances Sep, 2022 | Pubmed ID: 36112674
Secreted PGK1 and IGFBP2 contribute to the bystander effect of miR-10b gene editing in glioma.
Molecular therapy. Nucleic acids Mar, 2023 | Pubmed ID: 36700043
Effective Rapid Blood Perfusion in .
bioRxiv : the preprint server for biology Feb, 2023 | Pubmed ID: 36778320
Age-associated DNA methylation changes in frogs.
Epigenetics Dec, 2023 | Pubmed ID: 37092296
On standardization of controls in lifespan studies.
bioRxiv : the preprint server for biology Aug, 2023 | Pubmed ID: 37645987
Open Genes-a new comprehensive database of human genes associated with aging and longevity.
Nucleic acids research Jan, 2024 | Pubmed ID: 37665017
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