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Department of Molecular,
Cellular and Developmental Biology,
Department of Molecular, Cellular and Developmental Biology
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RNA-protein interactions that regulate pre-mRNA splicing.
Gene expression , 2002 | Pubmed ID: 11868989
Sex lethal and U2 small nuclear ribonucleoprotein auxiliary factor (U2AF65) recognize polypyrimidine tracts using multiple modes of binding.
RNA (New York, N.Y.) Jan, 2003 | Pubmed ID: 12554879
Drosophila polypyrimidine-tract binding protein (PTB) functions specifically in the male germline.
The EMBO journal Jun, 2003 | Pubmed ID: 12805208
The conserved RNA recognition motif 3 of U2 snRNA auxiliary factor (U2AF 65) is essential in vivo but dispensable for activity in vitro.
RNA (New York, N.Y.) Feb, 2004 | Pubmed ID: 14730023
Building specificity with nonspecific RNA-binding proteins.
Nature structural & molecular biology Aug, 2005 | Pubmed ID: 16077728
Fast-Find: a novel computational approach to analyzing combinatorial motifs.
BMC bioinformatics Jan, 2006 | Pubmed ID: 16393334
Drosophila Sex-lethal protein mediates polyadenylation switching in the female germline.
The EMBO journal Mar, 2006 | Pubmed ID: 16511567
Genome-wide identification of alternatively spliced mRNA targets of specific RNA-binding proteins.
PloS one Jun, 2007 | Pubmed ID: 17565373
A conditional role of U2AF in splicing of introns with unconventional polypyrimidine tracts.
Molecular and cellular biology Oct, 2007 | Pubmed ID: 17709389
A simple crosslinking method, CLAMP, to map the sites of RNA-contacting domains within a protein.
Methods in molecular biology (Clifton, N.J.) , 2008 | Pubmed ID: 18982291
Genomic mRNA profiling reveals compensatory mechanisms for the requirement of the essential splicing factor U2AF.
Molecular and cellular biology Feb, 2011 | Pubmed ID: 21149581
Bioinformatics Analysis to Identify RNA-Protein Interactions in Oogenesis.
Methods in molecular biology (Clifton, N.J.) , 2015 | Pubmed ID: 26324442
High Throughput Sequencing Identifies Misregulated Genes in the Drosophila Polypyrimidine Tract-Binding Protein (hephaestus) Mutant Defective in Spermatogenesis.
PloS one , 2016 | Pubmed ID: 26942929
University of Colorado at Boulder
Ravinder Singh1
1Department of Molecular, Cellular and Developmental Biology, University of Colorado at Boulder
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