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Barcelona Supercomputing Center

1 ARTICLES PUBLISHED IN JoVE

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Genetics

An Integrated Workflow to Study the Promoter-Centric Spatio-Temporal Genome Architecture in Scarce Cell Populations
Llorenç Rovirosa *1, Laureano Tomás-Daza *1,2, Blanca Urmeneta 1, Alfonso Valencia 2,3, Biola M. Javierre 1,4
1Josep Carreras Leukaemia Research Institute, 2Barcelona Supercomputing Center, 3Catalan Institution for Research and Advanced Studies (ICREA), 4Institute for Health Science Research Germans Trias i Pujol

Gene expression is regulated by interactions of gene promoters with distal regulatory elements. Here, we descirbe how low input Capture Hi-C (liCHi-C) allows the identification of these interactions in rare cell types, which were previously unmeasurable.

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