The Joint Institute for Biological Sciences
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Quantification of Nitrosomonas oligotropha-like ammonia-oxidizing bacteria and Nitrospira spp. from full-scale wastewater treatment plants by competitive PCR.
Applied and environmental microbiology Jan, 2002 | Pubmed ID: 11772633
Long PCR-amplified rDNA for PCR-RFLP- and Rep-PCR-based approaches to recognize closely related microbial species.
Journal of microbiological methods May, 2002 | Pubmed ID: 11869797
In vitro estrogen receptor binding of PCBs: measured activity and detection of hydroxylated metabolites in a recombinant yeast assay.
Toxicology and applied pharmacology May, 2002 | Pubmed ID: 12009855
Integrated CMOS photodetectors and signal processing for very low-level chemical sensing with the bioluminescent bioreporter integrated circuit.
Sensors and actuators. B, Chemical Jun, 2002 | Pubmed ID: 12238524
Real-time PCR quantification of nitrifying bacteria in a municipal wastewater treatment plant.
Environmental science & technology Jan, 2003 | Pubmed ID: 12564907
Frequency domain analysis of noise in autoregulated gene circuits.
Proceedings of the National Academy of Sciences of the United States of America Apr, 2003 | Pubmed ID: 12671069
Environmental application of array technology: promise, problems and practicalities.
Current opinion in biotechnology Jun, 2003 | Pubmed ID: 12849785
Analysis of noise in quorum sensing.
Omics : a journal of integrative biology , 2003 | Pubmed ID: 14583119
Power analysis for real-time PCR quantification of genes in activated sludge and analysis of the variability introduced by DNA extraction.
Applied and environmental microbiology Nov, 2003 | Pubmed ID: 14602618
Expression of the Photorhabdus luminescens lux genes (luxA, B, C, D, and E) in Saccharomyces cerevisiae.
FEMS yeast research Dec, 2003 | Pubmed ID: 14654435
Evaluation of a plasmid-based 16S-23S rDNA intergenic spacer region array for analysis of microbial diversity in industrial wastewater.
Journal of microbiological methods Apr, 2004 | Pubmed ID: 15003691
Emerging foundations: nano-engineering and bio-microelectronics for environmental biotechnology.
Current opinion in microbiology Jun, 2004 | Pubmed ID: 15196494
Frequency domain chemical Langevin analysis of stochasticity in gene transcriptional regulation.
Journal of theoretical biology Aug, 2004 | Pubmed ID: 15234205
Abundance of dioxygenase genes similar to Ralstonia sp. strain U2 nagAc is correlated with naphthalene concentrations in coal tar-contaminated freshwater sediments.
Applied and environmental microbiology Jul, 2004 | Pubmed ID: 15240274
Analysis and glycosyl composition of the exopolysaccharide isolated from the floc-forming wastewater bacterium Thauera sp. MZ1T.
Environmental microbiology Aug, 2004 | Pubmed ID: 15250880
Estrogen content of dairy and swine wastes.
Environmental science & technology Jul, 2004 | Pubmed ID: 15296306
Emergence of competitive dominant ammonia-oxidizing bacterial populations in a full-scale industrial wastewater treatment plant.
Applied and environmental microbiology Feb, 2005 | Pubmed ID: 15691975
Evaluation of polycyclic aromatic hydrocarbons in the activation of early growth response-1 and peroxisome proliferator activated receptors.
Toxicological sciences : an official journal of the Society of Toxicology May, 2005 | Pubmed ID: 15716483
Codon optimization of bacterial luciferase (lux) for expression in mammalian cells.
Journal of industrial microbiology & biotechnology Mar, 2005 | Pubmed ID: 15761767
Use of Saccharomyces cerevisiae BLYES expressing bacterial bioluminescence for rapid, sensitive detection of estrogenic compounds.
Applied and environmental microbiology Aug, 2005 | Pubmed ID: 16085836
In vitro immune toxicity of depleted uranium: effects on murine macrophages, CD4+ T cells, and gene expression profiles.
Environmental health perspectives Jan, 2006 | Pubmed ID: 16393663
Volatile fatty acid impacts on nitrite oxidation and carbon dioxide fixation in activated sludge.
Water research Feb, 2006 | Pubmed ID: 16436292
Direct quantification of N-(3-oxo-hexanoyl)-L-homoserine lactone in culture supernatant using a whole-cell bioreporter.
Journal of microbiological methods Jan, 2007 | Pubmed ID: 16916554
Escherichia coli loading at or near base flow in a mixed-use watershed.
Journal of environmental quality Nov-Dec, 2006 | Pubmed ID: 17071895
Quantitative analysis of EDC-condensed DNA on vertically aligned carbon nanofiber gene delivery arrays.
Biotechnology and bioengineering Jul, 2007 | Pubmed ID: 17154308
Distribution and transport of coal tar-derived PAHs in fine-grained residuum.
Chemosphere Jun, 2007 | Pubmed ID: 17303216
Concurrent nitrite oxidation and aerobic denitrification in activated sludge exposed to volatile fatty acids.
Biotechnology and bioengineering Aug, 2007 | Pubmed ID: 17304559
Bacteriophage-based bioluminescent bioreporter for the detection of Escherichia coli 0157:H7.
Journal of food protection Jun, 2007 | Pubmed ID: 17612068
Efficacy of Bacteroides measurements for reducing the statistical uncertainty associated with hydrologic flow and fecal loads in a mixed use watershed.
Journal of environmental quality Sep-Oct, 2007 | Pubmed ID: 17636294
Attributing effects of aqueous C60 nano-aggregates to tetrahydrofuran decomposition products in larval zebrafish by assessment of gene expression.
Environmental health perspectives Jul, 2007 | Pubmed ID: 17637923
Saccharomyces cerevisiae BLYAS, a new bioluminescent bioreporter for detection of androgenic compounds.
Applied and environmental microbiology Oct, 2007 | Pubmed ID: 17675419
Comparative quantitative prevalence of Mycobacteria and functionally abundant nidA, nahAc, and nagAc dioxygenase genes in coal tar contaminated sediments.
Environmental science & technology Aug, 2007 | Pubmed ID: 17822112
Detection of nitrate/nitrite bioavailability in wastewater using a luxCDABE-based Klebsiella oxytoca bioluminescent bioreporter.
Journal of microbiology and biotechnology Aug, 2007 | Pubmed ID: 18051593
Bacteriophage-amplified bioluminescent sensing of Escherichia coli O157:H7.
Analytical and bioanalytical chemistry May, 2008 | Pubmed ID: 18188543
Response of Nitrobacter spp. ribosomal gene and transcript abundance following nitrite starvation and exposure to mechanistically distinct inhibitors.
Environmental science & technology Feb, 2008 | Pubmed ID: 18323120
Temporal variation and persistence of bacteria in streams.
Journal of environmental quality Jul-Aug, 2008 | Pubmed ID: 18574188
Genome sequence of the Bacteroides fragilis phage ATCC 51477-B1.
Virology journal , 2008 | Pubmed ID: 18710568
Screening of potentially hormonally active chemicals using bioluminescent yeast bioreporters.
Toxicological sciences : an official journal of the Society of Toxicology Jan, 2009 | Pubmed ID: 18996888
A destabilized bacterial luciferase for dynamic gene expression studies.
Systems and synthetic biology Mar, 2007 | Pubmed ID: 19003433
Use of gene probes to assess the impact and effectiveness of aerobic in situ bioremediation of TCE.
Archives of microbiology Mar, 2009 | Pubmed ID: 19034430
Inducible RNA interference-mediated gene silencing using nanostructured gene delivery arrays.
ACS nano Jan, 2008 | Pubmed ID: 19206549
Factors influencing the persistence of fecal Bacteroides in stream water.
Journal of environmental quality May-Jun, 2009 | Pubmed ID: 19398520
Microbial community structure and biodegradation activity of particle-associated bacteria in a coal tar contaminated creek.
Environmental science & technology May, 2009 | Pubmed ID: 19534112
PAH biodegradative genotypes in Lake Erie sediments: evidence for broad geographical distribution of pyrene-degrading mycobacteria.
Environmental science & technology May, 2009 | Pubmed ID: 19544841
Transcriptional profiling of Saccharomyces cerevisiae upon exposure to saxitoxin.
Environmental science & technology Aug, 2009 | Pubmed ID: 19731715
EPA at 40: bringing environmental protection into the 21st century.
Environmental science & technology Dec, 2009 | Pubmed ID: 19943637
China-U.S. workshop on biotechnology of bioenergy plants.
Ecotoxicology (London, England) Jan, 2010 | Pubmed ID: 19967444
Transcription levels (amoA mRNA-based) and population dominance (amoA gene-based) of ammonia-oxidizing bacteria.
Journal of industrial microbiology & biotechnology Jul, 2010 | Pubmed ID: 20440533
Efficacy of hollow-fiber ultrafiltration for microbial sampling in groundwater.
Ground water Jan-Feb, 2011 | Pubmed ID: 20497484
Autonomous bioluminescent expression of the bacterial luciferase gene cassette (lux) in a mammalian cell line.
PloS one , 2010 | Pubmed ID: 20805991
Bioenergy sustainability in China: potential and impacts.
Environmental management Oct, 2010 | Pubmed ID: 20838792
The association between nC60 and 17α-ethinylestradiol (EE2) decreases EE2 bioavailability in zebrafish and alters nanoaggregate characteristics.
Nanotoxicology Sep, 2011 | Pubmed ID: 20969539
Global gene expression profiling in larval zebrafish exposed to microcystin-LR and microcystis reveals endocrine disrupting effects of Cyanobacteria.
Environmental science & technology Mar, 2011 | Pubmed ID: 21280650
Comparison of human optimized bacterial luciferase, firefly luciferase, and green fluorescent protein for continuous imaging of cell culture and animal models.
Journal of biomedical optics Apr, 2011 | Pubmed ID: 21529093
Impact of population and latrines on fecal contamination of ponds in rural Bangladesh.
The Science of the total environment Aug, 2011 | Pubmed ID: 21632095
Detection of dichloromethane with a bioluminescent (lux) bacterial bioreporter.
Journal of industrial microbiology & biotechnology Jan, 2012 | Pubmed ID: 21688172
Draft genome sequence of the polycyclic aromatic hydrocarbon-degrading, genetically engineered bioluminescent bioreporter Pseudomonas fluorescens HK44.
Journal of bacteriology Sep, 2011 | Pubmed ID: 21742869
Horizontal transfer of PAH catabolism genes in Mycobacterium: evidence from comparative genomics and isolated pyrene-degrading bacteria.
Environmental science & technology Jan, 2012 | Pubmed ID: 21899303
Pathogen detection using engineered bacteriophages.
Analytical and bioanalytical chemistry Apr, 2012 | Pubmed ID: 22101465
Implications of fecal bacteria input from latrine-polluted ponds for wells in sandy aquifers.
Environmental science & technology Feb, 2012 | Pubmed ID: 22191430
Guest comment: Environmental genomics focus issue.
Environmental science & technology Jan, 2012 | Pubmed ID: 22208704
Dissolution and transport of coal tar compounds in fractured clay-rich residuum.
Journal of hazardous materials Feb, 2012 | Pubmed ID: 22209208
Reporter proteins in whole-cell optical bioreporter detection systems, biosensor integrations, and biosensing applications.
Sensors (Basel, Switzerland) , 2009 | Pubmed ID: 22291559
Inhibition of copper uptake in yeast reveals the copper transporter Ctr1p as a potential molecular target of saxitoxin.
Environmental science & technology Feb, 2012 | Pubmed ID: 22304436
Lack of androgenicity and estrogenicity of the three monomers used in Eastman's Tritan™ copolyesters.
Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association Jun, 2012 | Pubmed ID: 22343188
In vivo bioluminescent imaging (BLI): noninvasive visualization and interrogation of biological processes in living animals.
Sensors (Basel, Switzerland) , 2011 | Pubmed ID: 22346573
Pseudomonas fluorescens HK44: lessons learned from a model whole-cell bioreporter with a broad application history.
Sensors (Basel, Switzerland) , 2012 | Pubmed ID: 22438725
Global gene expression in larval zebrafish (Danio rerio) exposed to selective serotonin reuptake inhibitors (fluoxetine and sertraline) reveals unique expression profiles and potential biomarkers of exposure.
Environmental pollution (Barking, Essex : 1987) Aug, 2012 | Pubmed ID: 22575097
Comparison of fecal indicators with pathogenic bacteria and rotavirus in groundwater.
The Science of the total environment Jun, 2012 | Pubmed ID: 22705866
Unsealed tubewells lead to increased fecal contamination of drinking water.
Journal of water and health Dec, 2012 | Pubmed ID: 23165714
Complete genome sequence of Thauera aminoaromatica strain MZ1T.
Standards in genomic sciences Jul, 2012 | Pubmed ID: 23407619
Paralytic shellfish toxins inhibit copper uptake in Chlamydomonas reinhardtii.
Environmental toxicology and chemistry / SETAC Jun, 2013 | Pubmed ID: 23423950
An overview on the marine neurotoxin, saxitoxin: genetics, molecular targets, methods of detection and ecological functions.
Marine drugs Apr, 2013 | Pubmed ID: 23535394
Commercial DNA extraction kits impact observed microbial community composition in permafrost samples.
FEMS microbiology ecology Sep, 2013 | Pubmed ID: 24102625
C60 reduces the bioavailability of mercury in aqueous solutions.
Chemosphere Oct, 2013 | Pubmed ID: 24125709
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