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Cell Biology and Neuroscience
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The carboxy-terminal domain of the DExDH protein YxiN is sufficient to confer specificity for 23S rRNA.
Journal of molecular biology Dec, 2002 | Pubmed ID: 12460566
Interaction of Escherichia coli DbpA with 23S rRNA in different functional states of the enzyme.
Nucleic acids research , 2004 | Pubmed ID: 15173385
YxiN is a modular protein combining a DEx(D/H) core and a specific RNA-binding domain.
The Journal of biological chemistry Oct, 2005 | Pubmed ID: 16118224
The domain of the Bacillus subtilis DEAD-box helicase YxiN that is responsible for specific binding of 23S rRNA has an RNA recognition motif fold.
RNA (New York, N.Y.) Jun, 2006 | Pubmed ID: 16611943
A biochemical approach to identifying microRNA targets.
Proceedings of the National Academy of Sciences of the United States of America Dec, 2007 | Pubmed ID: 18042700
Developmentally regulated cleavage of tRNAs in the bacterium Streptomyces coelicolor.
Nucleic acids research Feb, 2008 | Pubmed ID: 18084030
The miR-17~92 cluster collaborates with the Sonic Hedgehog pathway in medulloblastoma.
Proceedings of the National Academy of Sciences of the United States of America Feb, 2009 | Pubmed ID: 19196975
Cell contact-dependent acquisition of cellular and viral nonautonomously encoded small RNAs.
Genes & development Aug, 2009 | Pubmed ID: 19684116
The CRISPR system: small RNA-guided defense in bacteria and archaea.
Molecular cell Jan, 2010 | Pubmed ID: 20129051
Diverse endonucleolytic cleavage sites in the mammalian transcriptome depend upon microRNAs, Drosha, and additional nucleases.
Molecular cell Jun, 2010 | Pubmed ID: 20620951
RNA biology in a test tube--an overview of in vitro systems/assays.
Wiley interdisciplinary reviews. RNA Jul-Aug, 2012 | Pubmed ID: 22447682
Site identification in high-throughput RNA-protein interaction data.
Bioinformatics (Oxford, England) Dec, 2012 | Pubmed ID: 23024010
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates.
Genes & development Jul, 2013 | Pubmed ID: 23824327
Measuring mRNA Translation by Polysome Profiling.
Methods in molecular biology (Clifton, N.J.) , 2016 | Pubmed ID: 26965262
Immunoblot screening of CRISPR/Cas9-mediated gene knockouts without selection.
BMC molecular biology Apr, 2016 | Pubmed ID: 27038923
Induction and suppression of antiviral RNA interference by influenza A virus in mammalian cells.
Nature microbiology Dec, 2016 | Pubmed ID: 27918527
Transcriptome-wide microRNA and target dynamics in the fat body during the gonadotrophic cycle of Aedes aegypti.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2017 | Pubmed ID: 28223504
University of California, Riverside
Erin L. Sternburg1,
Kristen C. Dias1,
Fedor V. Karginov1
1Cell Biology and Neuroscience, University of California, Riverside
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