Amanda B. Hummon

A novel prohormone processing site in Aplysia californica: the Leu-Leu rule.

From precursor to final peptides: a statistical sequence-based approach to predicting prohormone processing.

Characterization of Aplysia enticin and temptin, two novel water-borne protein pheromones that act in concert with attractin to stimulate mate attraction.

The chemistry of thought: neurotransmitters in the brain.

Discovering new invertebrate neuropeptides using mass spectrometry.

Bridging neuropeptidomics and genomics with bioinformatics: Prediction of mammalian neuropeptide prohormone processing.

From the genome to the proteome: uncovering peptides in the Apis brain.

Gene expression profiling reveals a massive, aneuploidy-dependent transcriptional deregulation and distinct differences between lymph node-negative and lymph node-positive colon carcinomas.

Isolation and solubilization of proteins after TRIzol extraction of RNA and DNA from patient material following prolonged storage.

Chromosomal breakpoints in primary colon cancer cluster at sites of structural variants in the genome.

Integrative genomics reveals mechanisms of copy number alterations responsible for transcriptional deregulation in colorectal cancer.

A genomic strategy for the functional validation of colorectal cancer genes identifies potential therapeutic targets.

Right-side and left-side colon cancer follow different pathways to relapse.

Imaging mass spectrometry of three-dimensional cell culture systems.

Systems-wide RNAi analysis of CASP8AP2/FLASH shows transcriptional deregulation of the replication-dependent histone genes and extensive effects on the transcriptome of colorectal cancer cells.

Comparative label-free LC-MS/MS analysis of colorectal adenocarcinoma and metastatic cells treated with 5-fluorouracil.

Effects of the miR-143/-145 microRNA cluster on the colon cancer proteome and transcriptome.

Genetic amplification of the NOTCH modulator LNX2 upregulates the WNT/β-catenin pathway in colorectal cancer.

Imaging mass spectrometry: from tissue sections to cell cultures.

Aneuploidy, oncogene amplification and epithelial to mesenchymal transition define spontaneous transformation of murine epithelial cells.

Evaluation of therapeutics in three-dimensional cell culture systems by MALDI imaging mass spectrometry.

Combination of multistep IMAC enrichment with high-pH reverse phase separation for in-depth phosphoproteomic profiling.

Single cell metabolic profiling of tumor mimics.

Comparative LC-MS/MS analysis of optimal cutting temperature (OCT) compound removal for the study of mammalian proteomes.

Selective, bead-based global peptide capture using a bifunctional cross-linker.

Comparison of bottom-up proteomic approaches for LC-MS analysis of complex proteomes.

Correlated mass spectrometry imaging and confocal Raman microscopy for studies of three-dimensional cell culture sections.

Proteomic and Functional Investigation of the Colon Cancer Relapse-Associated Genes NOX4 and ITGA3.