Department of Medicine
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Imaging mass spectrometry of natural products.
Natural product reports Dec, 2009 | Pubmed ID: 19936384
Expansion of the mycobacterial "PUPylome".
Molecular bioSystems Feb, 2010 | Pubmed ID: 20094657
Capturing bacterial metabolic exchange using thin film desorption electrospray ionization-imaging mass spectrometry.
Analytical chemistry Mar, 2010 | Pubmed ID: 20121185
Integrating '-omics' and natural product discovery platforms to investigate metabolic exchange in microbiomes.
Current opinion in chemical biology Feb, 2011 | Pubmed ID: 21087892
The evolving field of imaging mass spectrometry and its impact on future biological research.
Journal of mass spectrometry : JMS Feb, 2011 | Pubmed ID: 21322093
Imaging mass spectrometry in microbiology.
Nature reviews. Microbiology Aug, 2011 | Pubmed ID: 21822293
Mass spectral molecular networking of living microbial colonies.
Proceedings of the National Academy of Sciences of the United States of America Jun, 2012 | Pubmed ID: 22586093
The spectral networks paradigm in high throughput mass spectrometry.
Molecular bioSystems Oct, 2012 | Pubmed ID: 22610447
Primer on agar-based microbial imaging mass spectrometry.
Journal of bacteriology Nov, 2012 | Pubmed ID: 22821974
Microbial metabolic exchange in 3D.
The ISME journal Apr, 2013 | Pubmed ID: 23283018
MS/MS networking guided analysis of molecule and gene cluster families.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2013 | Pubmed ID: 23798442
Interspecies interactions stimulate diversification of the Streptomyces coelicolor secreted metabolome.
mBio , 2013 | Pubmed ID: 23963177
Metabolic profiling directly from the Petri dish using nanospray desorption electrospray ionization imaging mass spectrometry.
Analytical chemistry Nov, 2013 | Pubmed ID: 24047514
Quantitative molecular networking to profile marine cyanobacterial metabolomes.
The Journal of antibiotics Jan, 2014 | Pubmed ID: 24281659
Thiopeptide antibiotics stimulate biofilm formation in Bacillus subtilis.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2015 | Pubmed ID: 25713360
Nonribosomal peptides, key biocontrol components for Pseudomonas fluorescens In5, isolated from a Greenlandic suppressive soil.
mBio Mar, 2015 | Pubmed ID: 25784695
Benchmark datasets for 3D MALDI- and DESI-imaging mass spectrometry.
GigaScience , 2015 | Pubmed ID: 25941567
Genome mining and metabolic profiling of the rhizosphere bacterium Pseudomonas sp. SH-C52 for antimicrobial compounds.
Frontiers in microbiology , 2015 | Pubmed ID: 26217324
Arteriovenous Blood Metabolomics: A Readout of Intra-Tissue Metabostasis.
Scientific reports Aug, 2015 | Pubmed ID: 26244428
Molecular and chemical dialogues in bacteria-protozoa interactions.
Scientific reports Aug, 2015 | Pubmed ID: 26246193
Comparative genomics and metabolic profiling of the genus Lysobacter.
BMC genomics Nov, 2015 | Pubmed ID: 26597042
Metabolite Profiling and Stable Isotope Tracing in Sorted Subpopulations of Mammalian Cells.
Analytical chemistry Mar, 2016 | Pubmed ID: 26855138
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking.
Nature biotechnology Aug, 2016 | Pubmed ID: 27504778
Irena Roci1,2,
Hector Gallart-Ayala3,
Jeramie Watrous4,
Mohit Jain4,
Craig E. Wheelock3,
Roland Nilsson1,2
1Department of Medicine, Unit of Computational Medicine, Karolinska Institutet,
2Center for Molecular Medicine, Karolinska Institutet,
3Department of Medical Biochemistry and Biophysics, Division of Physiological Chemistry 2, Karolinska Institutet,
4Department of Medicine, University of California San Diego
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