Dong Xu

MUFOLD-WQA: A new selective consensus method for quality assessment in protein structure prediction.

Rank-one projections with adaptive margins for face recognition.

Epidermal growth factor-like domain 7 protects endothelial cells from hyperoxia-induced cell death.

Design and implementation of probability-based scoring function for peptide mass fingerprinting protein identification.

A fast algorithm for low-resolution protein structure prediction.

Genome-scale probe and primer design with PRIMEGENS.

Marginal Fisher analysis and its variants for human gait recognition and content- based image retrieval.

Cellular function prediction and biological pathway discovery in Arabidopsis thaliana using microarray data.

Phylogenetic analysis using complete signature information of whole genomes and clustered Neighbour-Joining method.

Identification of molecular markers for the oncogenic differentiation of hepatocellular carcinoma.

Tetraphenylphosphonium bis(2-thioxo-1,3-dithiole-4,5-dithiolato)aurate(III) acetone solvate and ethyltriphenylphosphonium bis(2-thioxo-1,3-dithiole-4,5-dithiolato)aurate(III).

Protein databases on the internet.

Retinal isoforms of inosine 5'-monophosphate dehydrogenase type 1 are poor nucleic acid binding proteins.

Proprioception of ankle and knee joints in obese boys and nonobese boys.

[Establishment of an I-SceI system and its application to introduce DNA double-strand break into human hepatoma cell line HepG2].

Chronic hypoxia and rat lung development: analysis by morphometry and directed microarray.

Discriminant locally linear embedding with high-order tensor data.

Effects of two novel nucleoside analogues on different hepatitis B virus promoters.

GeneFAS: A tool for prediction of gene function using multiple sources of data.

A lectin receptor-like kinase is required for pollen development in Arabidopsis.

Transcription profiling of soybean nodulation by Bradyrhizobium japonicum.

Role of baseline nodule density and changes in density and nodule features in the discrimination between benign and malignant solid indeterminate pulmonary nodules.

The management of undesirable cyanobacteria blooms in channel catfish ponds using a constructed wetland: Contribution to the control of off-flavor occurrences.

Protein databases on the internet.

Bioinformatics analysis for interactive proteomics.

K+ACh channel activation with carbachol increases atrial ANP release.

Tai Chi exercise and muscle strength and endurance in older people.

Tai Chi exercise and proprioception behavior in old people.

Effects of 16-week Tai Chi intervention on postural stability and proprioception of knee and ankle in older people.

Ensemble-based virtual screening reveals potential novel antiviral compounds for avian influenza neuraminidase.

Targeted screening of SiRNA directed HBV polymerase gene for effective inhibition of HBV expression.

PRIMEGENS-v2: genome-wide primer design for analyzing DNA methylation patterns of CpG islands.

Sequence diversity of Bacillus thuringiensis flagellin (H antigen) protein at the intra-H serotype level.

Swimming training can affect intrinsic calcium current characteristics in rat myocardium.

A critical assessment of Mus musculus gene function prediction using integrated genomic evidence.

Effect of nodule characteristics on variability of semiautomated volume measurements in pulmonary nodules detected in a lung cancer screening program.

[Studies on absorption mechanism of loganin in intestines of rats].

A link between SIN1 (MAPKAP1) and poly(rC) binding protein 2 (PCBP2) in counteracting environmental stress.

Video event recognition using kernel methods with multilevel temporal alignment.

Wanted: unique names for unique atom positions. PDB-wide analysis of diastereotopic atom names of small molecules containing diphosphate.

Direct binding of GTP cyclohydrolase and tyrosine hydroxylase: regulatory interactions between key enzymes in dopamine biosynthesis.

Face recognition using spatially constrained earth mover's distance.

P3DB: a plant protein phosphorylation database.

[Construction and identification of the eukaryotic expression vector pIRES2-EGFP-IL-1ra-Fcepsilon].

Enantioseparation of 15 organic phosphonate esters on the cellulose tris(3,5-dimethylphenyl carbamate) chiral stationary phase by HPLC.

IMP dehydrogenase type 1 associates with polyribosomes translating rhodopsin mRNA.

Smooth or attached solid indeterminate nodules detected at baseline CT screening in the NELSON study: cancer risk during 1 year of follow-up.

Establishment of a protein reference map for soybean root hair cells.

Heat shock protein 27 protects lung epithelial cells from hyperoxia-induced apoptotic cell death.

Photoaffinity isolation and identification of proteins in cancer cell extracts that bind to platinum-modified DNA.

Novel recombinant fibrinogenase of Agkistrodon acutus venom protects against LPS-induced DIC.

[A study on the registration method and precision in image guided surgery].

ComPhy: prokaryotic composite distance phylogenies inferred from whole-genome gene sets.

Evolution analysis of the matrix (M) protein genes of 17 H9N2 chicken influenza viruses isolated in northern China during 1998-2008.

System analysis of an Arabidopsis mutant altered in de novo fatty acid synthesis reveals diverse changes in seed composition and metabolism.

Long-term monitoring shows hepatitis B virus resistance to entecavir in nucleoside-naïve patients is rare through 5 years of therapy.

Computational identification of protein methylation sites through bi-profile Bayes feature extraction.

Characterizing loop dynamics and ligand recognition in human- and avian-type influenza neuraminidases via generalized born molecular dynamics and end-point free energy calculations.

PDCD5 interacts with Tip60 and functions as a cooperator in acetyltransferase activity and DNA damage-induced apoptosis.

Trajectory tracking control of omnidirectional wheeled mobile manipulators: robust neural network-based sliding mode approach.

Distinct glycan topology for avian and human sialopentasaccharide receptor analogues upon binding different hemagglutinins: a molecular dynamics perspective.

Changes in muscle strength, endurance, and reaction of the lower extremities with Tai Chi intervention.

Computational methods for protein sequence comparison and search.

Generation of Phaseolus vulgaris ESTs and investigation of their regulation upon Uromyces appendiculatus infection.

Knockdown of ERp57 increases BiP/GRP78 induction and protects against hyperoxia and tunicamycin-induced apoptosis.

Semi-supervised bilinear subspace learning.

Expression of toll-like receptor 9 in peripheral blood mononuclear cells from patients with different hepatitis B and C viral loads.

Confidence assessment for protein identification by using peptide-mass fingerprinting data.

[Increasing cardiopulmonary bypass flow volume improves outcome of patient with carotid stenosis undergoing coronary artery bypass grafting].

Programmed cell death protein 5 (PDCD5) is phosphorylated by CK2 in vitro and in 293T cells.

Comparative study on overexpression of HER2/neu and HER3 in gastric cancer.

Textual query of personal photos facilitated by large-scale web data.

Combining sequence and structural profiles for protein solvent accessibility prediction.

Proteome analysis of a single zebrafish embryo using three different digestion strategies coupled with liquid chromatography-tandem mass spectrometry.

Gas sensors based on deposited single-walled carbon nanotube networks for DMMP detection.

A New Machine Learning Approach for Protein Phosphorylation Site Prediction in Plants.

Efficacy and safety of entecavir compared to lamivudine in nucleoside-naïve patients with chronic hepatitis B: a randomized double-blind trial in China.

Virologic, serologic, and biochemical outcomes through 2 years of treatment with entecavir and lamivudine in nucleoside-naïve Chinese patients with chronic hepatitis B: a randomized, multicenter study.

Enhancing bilinear subspace learning by element rearrangement.

Legume transcription factor genes: what makes legumes so special?

Large-scale analysis of putative soybean regulatory gene expression identifies a Myb gene involved in soybean nodule development.

Isotope pattern vector based tandem mass spectral data calibration for improved peptide and protein identification.

Anti-angiogenic activity of triptolide in anaplastic thyroid carcinoma is mediated by targeting vascular endothelial and tumor cells.

Orphan nuclear receptor Nur77 is required for the differentiation of C6 glioma cells induced by cholera toxin.

Mechanism of glycan receptor recognition and specificity switch for avian, swine, and human adapted influenza virus hemagglutinins: a molecular dynamics perspective.

MUFOLD: A new solution for protein 3D structure prediction.

Management of lung nodules detected by volume CT scanning.

Generating triangulated macromolecular surfaces by Euclidean Distance Transform.

Aspirin inhibits proliferation of gemcitabine-resistant human pancreatic cancer cells and augments gemcitabine-induced cytotoxicity.

Proprioception of foot and ankle complex in young regular practitioners of ice hockey, ballet dancing and running.

Bioinformatics methods for protein identification using Peptide mass fingerprinting.

A new unconventional halogen bond C-X...H-M between HCCX (X = Cl and Br) and HMH (M = Be and Mg): an ab initio study.

Efficacy of entecavir in chronic hepatitis B patients with mildly elevated alanine aminotransferase and biopsy-proven histological damage.

An integrated probabilistic approach for gene function prediction using multiple sources of high-throughput data.

[Nitrogen removal under the condition of carbon source supplement in integrated vertical-flow constructed wetland].

Genome sequence of the palaeopolyploid soybean.

SoyDB: a knowledge database of soybean transcription factors.

Comparison between endoluminal ultrasonography and spiral computerized tomography for the preoperative local staging of rectal carcinoma.

Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression.

Prediction of novel miRNAs and associated target genes in Glycine max.

Agent-based modeling of endotoxin-induced acute inflammatory response in human blood leukocytes.

Flexible manifold embedding: a framework for semi-supervised and unsupervised dimension reduction.

Genome wide exploration of the origin and evolution of amino acids.

Investigating the mechanism of disease in the RP10 form of retinitis pigmentosa.

Control of iodine deficiency disorders following 10-year universal salt iodization in Hebei Province of China.

Reformation of medical education in China.

Recombinant human PDCD5 sensitizes chondrosarcomas to cisplatin chemotherapy in vitro and in vivo.

Purification and biochemical characterisation of a novel glutamate decarboxylase from rice bran.

Effects of sediment dredging on water quality and zooplankton community structure in a shallow of eutrophic lake.

PMirP: a pre-microRNA prediction method based on structure-sequence hybrid features.

An integrated transcriptome atlas of the crop model Glycine max, and its use in comparative analyses in plants.

User-assisted ink-bleed reduction.

[Generation and characterization of monoclonal antibody against human PIK3IP1].

Image clustering using local discriminant models and global integration.

SeqRate: sequence-based protein folding type classification and rates prediction.

Identification of miRNA from Porphyra yezoensis by high-throughput sequencing and bioinformatics analysis.

ProteinDBS v2.0: a web server for global and local protein structure search.

Clinical features and prognosis in adult-onset Still's disease: a study of 104 cases.

[Study on optimization gradation of substrates in vertical flow constructed wetlands].

[The diagnostic value of anti-SSA antibody in primary Sjögren's syndrome].

Widespread losses of vomeronasal signal transduction in bats.

SNP discovery by high-throughput sequencing in soybean.

Musite, a tool for global prediction of general and kinase-specific phosphorylation sites.

The relationship between three heat shock protein 70 gene polymorphisms and susceptibility to lung cancer.

A multilayer evaluation approach for protein structure prediction and model quality assessment.

Genome-wide functional annotation by integrating multiple microarray datasets using meta-analysis.

Identification of transcription factor's targets using tissue-specific transcriptomic data in Arabidopsis thaliana.

Comparative studies of the pyrolytic and kinetic characteristics of maize straw and the seaweed Ulva pertusa.

Root hair systems biology.

Genome-wide DNA methylation maps in follicular lymphoma cells determined by methylation-enriched bisulfite sequencing.

Whole genome co-expression analysis of soybean cytochrome P450 genes identifies nodulation-specific P450 monooxygenases.

[The clinical effect and disquisition of anterior cervical approach surgery with posterior longitudinal ligament hook pliers and posterior longitudinal ligament nip pliers].

[An open-label, multicentric clinical trial to evaluate the efficacy and impact on bone metabolism of recombinant human tumor necrosis factor-α receptor II IgG Fc fusion protein with methotrexate in active rheumatoid arthritis: 24-week clinical and radiographic results from ReABLE study].

Semisupervised dimensionality reduction and classification through virtual label regression.

Contrast-enhanced whole-heart coronary MRA at 3.0T for the evaluation of cardiac venous anatomy.

2K09 and thereafter : the coming era of integrative bioinformatics, systems biology and intelligent computing for functional genomics and personalized medicine research.

Effector prediction in host-pathogen interaction based on a Markov model of a ubiquitous EPIYA motif.

Long-term treatment with entecavir induces reversal of advanced fibrosis or cirrhosis in patients with chronic hepatitis B.

[Characterization and comparison of the doppler compensation acoustic wave in Hipposideros armiger].

The effects of Boehmeria nivea (L.) Gaud. on embryonic development: in vivo and in vitro studies.

l-Lysinium trifluoro-acetate.

Modulus of elasticity of human periodontal ligament by optical measurement and numerical simulation.

The Musite open-source framework for phosphorylation-site prediction.

Triptolide-induced cell cycle arrest and apoptosis in human renal cell carcinoma cells.

[Application of acupuncture-assisted anesthesia in prostate biopsy via the perineum].

[Spectrum analysis methods of protein adsorption and design of biomedical materials].

[Comparison of rDNA internal transcribed spacer sequences in asparagus].

CT- and computer-based features of small hamartomas.

Homolog-specific PCR primer design for profiling splice variants.

A protein domain co-occurrence network approach for predicting protein function and inferring species phylogeny.

Use of coronary anatomy and late enhancement information both derived from contrast-enhanced whole-heart coronary MRA at 3 T for the assessment of ischemic left ventricular dysfunction.

Improving a consensus approach for protein structure selection by removing redundancy.

Using Pseudomonas putida xylE gene to teach molecular cloning techniques for undergraduates.

Low-dose rituximab therapy for refractory thrombocytopenia in patients with systemic lupus erythematosus--a prospective pilot study.

Targeting oncogenic miR-335 inhibits growth and invasion of malignant astrocytoma cells.

[Removal nitrogen of integrated vertical-flow constructed wetland under aeration condition].

Domain Transfer Multiple Kernel Learning.

Improving Web image search by bag-based reranking.

Comparison of daily anti-hypertensive effects of amlodipine and nifedipine coat-core using ambulatory blood pressure monitoring - utility of "hypobaric curve" and "hypobaric area".

Improving efficiency of adriamycin crossing blood brain barrier by combination of thermosensitive liposomes and hyperthermia.

Human gait recognition using patch distribution feature and locality-constrained group sparse representation.

Hexafluorobisphenol A covalently functionalized single-walled carbon nanotubes for detection of dimethyl methylphosphonate vapor.

Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing.

A sampling-based method for ranking protein structural models by integrating multiple scores and features.

Prediction of drought-resistant genes in Arabidopsis thaliana using SVM-RFE.

A dual-targeted soybean protein is involved in Bradyrhizobium japonicum infection of soybean root hair and cortical cells.

Histogram contextualization.

Gender differences in foot shape: a study of Chinese young adults.

A Multimedia Retrieval Framework Based on Semi-Supervised Ranking and Relevance Feedback.

Evaluation of the potential role of the macroalga Laminaria japonica for alleviating coastal eutrophication.

[Investigation and countermeasures analysis of catering waste in southern city in China].

Hole doping and surface functionalization of single-walled carbon nanotube chemiresistive sensors for ultrasensitive and highly selective organophosphor vapor detection.

Spectral embedded clustering: a framework for in-sample and out-of-sample spectral clustering.

In-situ cadmium phytoremediation using Solanum nigrum L.: the bio-accumulation characteristics trail.

Sliding window and regression based cup detection in digital fundus images for glaucoma diagnosis.

Phosphorus removal by laboratory-scale unvegetated vertical-flow constructed wetland systems using anthracite, steel slag and related blends as substrate.

Automated protein structure modeling in CASP9 by I-TASSER pipeline combined with QUARK-based ab initio folding and FG-MD-based structure refinement.

Initialization independent clustering with actively self-training method.

Improving the physical realism and structural accuracy of protein models by a two-step atomic-level energy minimization.

Inhibition of snowshoe hare succinate dehydrogenase activity as a mechanism of deterrence for papyriferic acid in birch.

Genomic and genetic evidence for the loss of umami taste in bats.

Preparation and characteristics of bio-oil from the marine brown alga Sargassum patens C. Agardh.

Comparative proteomic analysis revealed metabolic changes and the translational regulation of Cry protein synthesis in Bacillus thuringiensis.

Prediction of protein tertiary structures using MUFOLD.

Detection of Sudden Pedestrian Crossings for Driving Assistance Systems.

[Clinical and coronary angiographic features of patients with systemic vasculitis and coronary artery disease].

Correlation between posttranslational modification and intrinsic disorder in protein.

[Impact of prior cerebral infarction on in-hospital mortality in patients with acute myocardial infarction].

Pro-oncogenic potential of NM23-H2 in hepatocellular carcinoma.

Right ventricular and left atrial and left ventricular myxomas: report of a case.

Visual Event Recognition in Videos by Learning from Web Data.

The validity of a reference gene is highly dependent on the experimental conditions in green alga Ulva linza.

Cloning and expression analysis of two different LhcSR genes involved in stress adaptation in an Antarctic microalga, Chlamydomonas sp. ICE-L.

Protein databases on the Internet.

The successful treatment of flat warts with auricular acupuncture.

Evolutionary dynamics of protein domain architecture in plants.

Use experience evaluation of Google search for obtaining medical knowledge: a case study.

An epidemiological survey of children's iodine nutrition and goitre status in regions with mildly excessive iodine in drinking water in Hebei Province, China.