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Mount Mary University

1 ARTICLES PUBLISHED IN JoVE

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Biochemistry

Modeling an Enzyme Active Site using Molecular Visualization Freeware
Kristen Procko 1, Sandy Bakheet 1, Josh T. Beckham 1, Margaret A. Franzen 2, Henry Jakubowski 3, Walter R. P. Novak 4
1The University of Texas at Austin, 2Mount Mary University, 3College of St. Benedict/St. John’s University, 4Wabash College

A key skill in biomolecular modeling is displaying and annotating active sites in proteins. This technique is demonstrated using four popular free programs for macromolecular visualization: iCn3D, Jmol, PyMOL, and UCSF ChimeraX.

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