long-term-behavioral-tracking-of-freely-swimming-weakly-electric-fish

Long-term Behavioral Tracking of Freely Swimming Weakly Electric Fish

Long-term behavioral tracking can capture and quantify natural animal behaviors, including those occurring infrequently. Behaviors such as exploration and ...

University of Ottawa

Physiological measurements from an unrestrained, untethered, and freely moving animal permit analyses of neural states correlated to naturalistic behaviors of interest. Precise and reliable remote measurements remain technically challenging due to animal movement, which perturbs the relative geometries between the animal and sensors. Pulse-type electric fish generate a train of discrete and stereotyped electric organ discharges (EOD) to sense their surroundings actively, and rapid modulation of the discharge rate occurs while free swimming in Gymnotus sp. The modulation of EOD rates is a useful indicator of the fish's central state such as resting, alertness, and learning associated with exploration. However, the EOD pulse waveforms remotely observed at a pair of dipole electrodes continuously vary as the fish swims relative to the electrodes, which biases the judgment of the actual pulse timing. To measure the EOD pulse timing more accurately, reliably, and noninvasively from a free-swimming fish, we propose a novel method based on the principles of waveform reshaping and spatial averaging. Our method is implemented using envelope extraction and multichannel summation, which is more precise and reliable compared with other widely used threshold- or peak-based methods according to the tests performed under various source-detector geometries. Using the same method, we constructed a real-time electronic pulse detector performing an additional online pulse discrimination routine to enhance further the detection reliability. Our stand-alone pulse detector performed with high temporal precision (<10 μs) and reliability (error <1 per 10(6) pulses) and permits longer recording duration by storing only event time stamps (4 bytes/pulse).

James J. Jun

Department of Physics,
Department of Cellular and Molecular Medicine,
Centre for Neural Dynamics

University of Ottawa

Long-term Behavioral Tracking of Freely Swimming Weakly Electric Fish

James J. Jun

.css-o250i3{font-size:18px;font-family:Open Sans,sans-serif;line-height:21.6px;}Department of Physics,Department of Cellular and Molecular Medicine,Centre for Neural Dynamics

University of Ottawa

Long-term Behavioral Tracking of Freely Swimming Weakly Electric Fish

Department of Physics,
Department of Cellular and Molecular Medicine,
Centre for Neural Dynamics