Molecular Systems Biology,
Groningen Biomolecular Sciences and Biotechnology Institute,
Molecular Systems Biology, Groningen Biomolecular Sciences and Biotechnology Institute
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New insights in the spatially resolved dynamic pH measurement in macroscopic large absorbent particles by confocal laser scanning microscopy.
Journal of chromatography. A Jan, 2004 | Pubmed ID: 14753705
Optimization of enzymatic gas-phase reactions by increasing the long-term stability of the catalyst.
Biotechnology progress May-Jun, 2004 | Pubmed ID: 15176907
Method for quantitative determination of spatial polymer distribution in alginate beads using Raman spectroscopy.
Applied spectroscopy Mar, 2005 | Pubmed ID: 15901307
In silico genome-scale reconstruction and validation of the Staphylococcus aureus metabolic network.
Biotechnology and bioengineering Dec, 2005 | Pubmed ID: 16155945
Optimization of adsorptive immobilization of alcohol dehydrogenases.
Journal of bioscience and bioengineering Apr, 2005 | Pubmed ID: 16233799
Suitability of teicoplanin-aglycone bonded stationary phase for simulated moving bed enantioseparation of racemic amino acids employing composition-constrained eluents.
Journal of chromatography. A Apr, 2006 | Pubmed ID: 16500665
Integrated operation of continuous chromatography and biotransformations for the generic high yield production of fine chemicals.
Journal of biotechnology Jun, 2006 | Pubmed ID: 16516996
Putative regulatory sites unraveled by network-embedded thermodynamic analysis of metabolome data.
Molecular systems biology , 2006 | Pubmed ID: 16788595
Characterization of the AlkS/P(alkB)-expression system as an efficient tool for the production of recombinant proteins in Escherichia coli fed-batch fermentations.
Biotechnology and bioengineering Feb, 2007 | Pubmed ID: 16865736
Synthetic biology--putting engineering into biology.
Bioinformatics (Oxford, England) Nov, 2006 | Pubmed ID: 16954140
Reporter metabolite analysis of transcriptional profiles of a Staphylococcus aureus strain with normal phenotype and its isogenic hemB mutant displaying the small-colony-variant phenotype.
Journal of bacteriology Nov, 2006 | Pubmed ID: 16980462
Systematic assignment of thermodynamic constraints in metabolic network models.
BMC bioinformatics , 2006 | Pubmed ID: 17123434
Genetics. Getting closer to the whole picture.
Science (New York, N.Y.) Apr, 2007 | Pubmed ID: 17463274
Living with an imperfect cell wall: compensation of femAB inactivation in Staphylococcus aureus.
BMC genomics , 2007 | Pubmed ID: 17784943
anNET: a tool for network-embedded thermodynamic analysis of quantitative metabolome data.
BMC bioinformatics , 2008 | Pubmed ID: 18416814
Mass spectrometric method for analyzing metabolites in yeast with single cell sensitivity.
Angewandte Chemie (International ed. in English) , 2008 | Pubmed ID: 18543269
A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology.
Nature biotechnology Oct, 2008 | Pubmed ID: 18846089
A divide-and-conquer approach to analyze underdetermined biochemical models.
Bioinformatics (Oxford, England) Feb, 2009 | Pubmed ID: 19126574
Physiology of mycobacteria.
Advances in microbial physiology , 2009 | Pubmed ID: 19573696
Nutritional systems biology modeling: from molecular mechanisms to physiology.
PLoS computational biology Nov, 2009 | Pubmed ID: 19956660
Exploiting cell-free systems: Implementation and debugging of a system of biotransformations.
Biotechnology and bioengineering Jun, 2010 | Pubmed ID: 20091765
Differential glucose repression in common yeast strains in response to HXK2 deletion.
FEMS yeast research May, 2010 | Pubmed ID: 20199578
Bacterial adaptation through distributed sensing of metabolic fluxes.
Molecular systems biology , 2010 | Pubmed ID: 20212527
Systems biology of microbial metabolism.
Current opinion in microbiology Jun, 2010 | Pubmed ID: 20219420
Single cell metabolomics.
Current opinion in biotechnology Feb, 2011 | Pubmed ID: 20934866
Thermodynamic calculations for biochemical transport and reaction processes in metabolic networks.
Biophysical journal Nov, 2010 | Pubmed ID: 21081060
From good old biochemical analyses to high-throughput omics measurements and back.
Current opinion in biotechnology Feb, 2011 | Pubmed ID: 21190838
Comprehensive quantitative analysis of central carbon and amino-acid metabolism in Saccharomyces cerevisiae under multiple conditions by targeted proteomics.
Molecular systems biology Feb, 2011 | Pubmed ID: 21283140
Optimization of a blueprint for in vitro glycolysis by metabolic real-time analysis.
Nature chemical biology May, 2011 | Pubmed ID: 21423171
The cost of virulence: retarded growth of Salmonella Typhimurium cells expressing type III secretion system 1.
PLoS pathogens Jul, 2011 | Pubmed ID: 21829349
Condition-dependent cell volume and concentration of Escherichia coli to facilitate data conversion for systems biology modeling.
PloS one , 2011 | Pubmed ID: 21829590
Carbon-13 labelling strategy for studying the ATP metabolism in individual yeast cells by micro-arrays for mass spectrometry.
Molecular bioSystems Oct, 2011 | Pubmed ID: 21850345
A flux-sensing mechanism could regulate the switch between respiration and fermentation.
FEMS yeast research Mar, 2012 | Pubmed ID: 22129078
System-level insights into yeast metabolism by thermodynamic analysis of elementary flux modes.
PLoS computational biology , 2012 | Pubmed ID: 22416224
Whole lifespan microscopic observation of budding yeast aging through a microfluidic dissection platform.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2012 | Pubmed ID: 22421136
Multidimensional optimality of microbial metabolism.
Science (New York, N.Y.) May, 2012 | Pubmed ID: 22556256
Prediction of microbial growth rate versus biomass yield by a metabolic network with kinetic parameters.
PLoS computational biology , 2012 | Pubmed ID: 22792053
Functioning of a metabolic flux sensor in Escherichia coli.
Proceedings of the National Academy of Sciences of the United States of America Jan, 2013 | Pubmed ID: 23277571
Temporal system-level organization of the switch from glycolytic to gluconeogenic operation in yeast.
Molecular systems biology , 2013 | Pubmed ID: 23549479
Dissecting specific and global transcriptional regulation of bacterial gene expression.
Molecular systems biology , 2013 | Pubmed ID: 23591774
Construction and use of a microfluidic dissection platform for long-term imaging of cellular processes in budding yeast.
Nature protocols Jun, 2013 | Pubmed ID: 23640166
Mass spectrometry-based metabolomics of single yeast cells.
Proceedings of the National Academy of Sciences of the United States of America May, 2013 | Pubmed ID: 23671112
Daphne H. E. W. Huberts1,
Georges E. Janssens2,
Sung Sik Lee3,
Ima Avalos Vizcarra4,
Matthias Heinemann1,5
1Molecular Systems Biology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen,
2Department for the Biology of Ageing, European Research Institute for the Biology of Ageing, University Medical Centre Groningen, University of Groningen,
3Institute of Biochemistry, ETH Zurich,
4Department of Health Sciences and Technology, ETH Zurich,
5Institute of Molecular Systems Biology, ETH Zurich
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