Name: paper-based devices for isolation and characterization of extracellular vesicles
Uploaded: 2015-04-03T14:00:00
Description: Watch this Scientific Journal Video about Paper-based Devices for Isolation and Characterization of Extracellular Vesicles at JoVE.com

Dit werk werd mede ondersteund door de Taiwan National Science Council grants- NSC 99-2320-B-007-005-MY2 (CC) en NSC 101-2628-E-007-011-MY3 (CMC), en de Veterans General ziekenhuizen en Universiteit Systeem van Taiwan Joint Research Program (CC).

Een algemeen schema van de operatie procedure wordt gegeven in figuur 1. Met behulp van ethische praktijken, we verzamelde bloedmonsters van gezonde proefpersonen, en verkregen waterige humor monsters van patiënten via de Taichung Veterans General Hospital (TCVGH), Taichung, Taiwan onder IRB goedgekeurde protocollen ( IRB TCVGH No. CF11213-1). 1. Fabrication papier Devices <ol><li> Snijd chromatografie papier in kringen van 5 mm in diameter dezelfde opstelling als een 96-well microtiter plate...

<ol>
	<li>Caby, M. P., Lankar, D., Vincendeau-Scherrer, C., Raposo, G., Bonnerot, C. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Exosomal-like+vesicles+are+present+in+human+blood+plasma.">Exosomal-like vesicles are present in human blood plasma.</a> Int. Immunol. 17, 879-887 (2005).</li><li>Lasser, C., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Human+saliva,+plasma+and+breast+milk+exosomes+contain+RNA:+uptake+by+macrophages.">Human saliva, plasma and breast milk exosomes contain RNA: uptake by macrophages.</a> J. Transl. Med. 9, 9 (2011).</li><li>Raj, D. A. A., Fiume, I., Capasso, G., Pocsfalvi, G. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=A+multiplex+quantitative+proteomics+strategy+for+protein+biomarker+studies+in+urinary+exosomes.">A multiplex quantitative proteomics strategy for protein biomarker studies in urinary exosomes.</a> Kidney Int. 81, 1263-1272 (2012).</li><li>Wiggins, R. C., Glatfelter, A., Kshirsagar, B., Brukman, J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Procoagulant+activity+in+normal+human-urine+associated+with+subcellular+particles.">Procoagulant activity in normal human-urine associated with subcellular particles.</a> Kidney Int. 29, 591-597 (1986).</li><li>Admyre, C., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Exosomes+with+immune+modulatory+features+are+present+in+human+breast+milk.">Exosomes with immune modulatory features are present in human breast milk.</a> J. Immunol. 179, 1969-1978 (2007).</li><li>Keller, S., Ridinger, J., Rupp, A. K., Janssen, J. W. 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P., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Proteomic+analysis+of+exosomes+isolated+from+human+malignant+pleural+effusions.">Proteomic analysis of exosomes isolated from human malignant pleural effusions.</a> Am. J. Resp. Cell Mol. Biol. 31, 114-121 (2004).</li><li>Perkumas, K. M., Hoffman, E. A., McKay, B. S., Allingham, R. R., Stamer, W. D. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Myocilin-associated+exosomes+in+human+ocular+samples.">Myocilin-associated exosomes in human ocular samples.</a> Exp. Eye Res. 84, 209-212 (2007).</li><li>Anderson, H. 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Invest. 90, 1549-1557 (2010).</li><li>Montecalvo, A., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Mechanism+of+transfer+of+functional+microRNAs+between+mouse+dendritic+cells+via+exosomes.">Mechanism of transfer of functional microRNAs between mouse dendritic cells via exosomes.</a> Blood. 119, 756-766 (2012).</li><li>Grange, C., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Microvesicles+released+from+human+renal+cancer+stem+cells+stimulate+angiogenesis+and+formation+of+lung+premetastatic+niche.">Microvesicles released from human renal cancer stem cells stimulate angiogenesis and formation of lung premetastatic niche.</a> Cancer Res. 71, 5346-5356 (2011).</li><li>Jaiswal, R., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Microparticle-associated+nucleic+acids+mediate+trait+dominance+in+cancer.">Microparticle-associated nucleic acids mediate trait dominance in cancer.</a> Faseb. J. 26, 420-429 (2012).</li><li>Thery, C., Clayton, A., Amigorena, S., Raposo, G., Morgan, K. K. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=.">.</a> Current protocols in cell biology. (UNIT 3.22), (2006).</li><li>Rood, I. M., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Comparison+of+three+methods+for+isolation+of+urinary+microvesicles+to+identify+biomarkers+of+nephrotic+syndrome.">Comparison of three methods for isolation of urinary microvesicles to identify biomarkers of nephrotic syndrome.</a> Kidney Int. 78, 810-816 (2010).</li><li>Taylor, D. D., Gercel-Taylor, C. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=MicroRNA+signatures+of+tumor-derived+exosomes+as+diagnostic+biomarkers+of+ovarian+cancer.">MicroRNA signatures of tumor-derived exosomes as diagnostic biomarkers of ovarian cancer.</a> Gynecol. Oncol. 110, 13-21 (2008).</li><li>Witwer, K. W., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Standardization+of+sample+collection,+isolation+and+analysis+methods+in+extracellular+vesicle+research.">Standardization of sample collection, isolation and analysis methods in extracellular vesicle research.</a> J. Extracellular Vesicles. 2, 20360 (2013).</li><li>Fernandez-Llama, P., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Tamm-Horsfall+protein+and+urinary+exosome+isolation.">Tamm-Horsfall protein and urinary exosome isolation.</a> Kidney Int. 77, 736-742 (2010).</li><li>Alvarez, M. L., Khosroheidari, M., Ravi, R. K., DiStefano, J. K. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Comparison+of+protein,+microRNA,+and+mRNA+yields+using+different+methods+of+urinary+exosome+isolation+for+the+discovery+of+kidney+disease+biomarkers.">Comparison of protein, microRNA, and mRNA yields using different methods of urinary exosome isolation for the discovery of kidney disease biomarkers.</a> Kidney Int. 82, 1024-1032 (2012).</li><li>Chen, C., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Microfluidic+isolation+and+transcriptome+analysis+of+serum+microvesicles.">Microfluidic isolation and transcriptome analysis of serum microvesicles.</a> Lab. Chip. 10, 505-511 (2010).</li><li>Davies, R. T., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Microfluidic+filtration+system+to+isolate+extracellular+vesicles+from+blood.">Microfluidic filtration system to isolate extracellular vesicles from blood.</a> Lab. Chip. 12, 5202-5210 (2012).</li><li>Chen, C., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Paper-based+immunoaffinity+devices+for+accessible+isolation+and+characterization+of+extracellular+vesicles.">Paper-based immunoaffinity devices for accessible isolation and characterization of extracellular vesicles.</a> Microfluid. Nanofluid. 16, 849-856 (2014).</li><li>Lamparski, H. G., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Production+and+characterization+of+clinical+grade+exosomes+derived+from+dendritic+cells.">Production and characterization of clinical grade exosomes derived from dendritic cells.</a> J. Immunol. Methods. 270, 211-226 (2002).</li><li>Cantin, R., Diou, J., Belanger, D., Tremblay, A. M., Gilbert, C. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Discrimination+between+exosomes+and+HIV-1:+Purification+of+both+vesicles+from+cell-free+supernatants.">Discrimination between exosomes and HIV-1: Purification of both vesicles from cell-free supernatants.</a> J. Immunol. Methods. 338, 21-30 (2008).</li><li>Carrilho, E., Martinez, A. W., Whitesides, G. M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Understanding+wax+printing:+a+simple+micropatterning+process+for+paper-based+microfluidics.">Understanding wax printing: a simple micropatterning process for paper-based microfluidics.</a> Anal. Chem. 81, 7091-7095 (2009).</li><li>Dungchai, W., Chailapakul, O., Henry, C. S. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Electrochemical+detection+for+paper-based+microfluidics.">Electrochemical detection for paper-based microfluidics.</a> Anal. Chem. 81, 5821-5826 (2009).</li><li>Glavan, A. C., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Omniphobic+'R-F+paper'+produced+by+silanization+of+paper+with+fluoroalkyltrichlorosilanes.">Omniphobic 'R-F paper' produced by silanization of paper with fluoroalkyltrichlorosilanes.</a> Adv. Funct. Mater. 24, 60-70 (2014).</li><li>Usami, S., Chen, H. H., Zhao, Y. H., Chien, S., Skalak, R. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Design+and+construction+of+a+linear+shear-stress+flow+chamber.">Design and construction of a linear shear-stress flow chamber.</a> Ann. Biomed. Eng. 21, 77-83 (1993).</li><li>Murthy, S. K., Sin, A., Tompkins, R. 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De meest kritische stappen voor een succesvolle isolatie van subgroepen van extracellulaire blaasjes zijn: 1) een goede keuze van papier; 2) stabiele en hoge dekking van vangende moleculen aan het oppervlak van de vezels; 3) de goede behandeling van monsters; en 4) de algemene hygiëne in laboratoria praktijk. Poreuze materialen zijn gebruikt in vele goedkope en apparatuur vrij assays. Zij kunnen afstembare poriegrootte veelzijdige toepassing, lage kosten en hoge oppervlakte-volume verhoudin...

Extracellular vesicles (EVs) are heterogeneous membranous particles that range in size from 40 nm to 5,000 nm and are released actively by many cell types via different biogenesis routes1-9. They contain unique and selected subsets of DNA, RNA, proteins, and surface markers from parental cells. Their involvement in a variety of cellular processes, such as intercellular communication10, immunity modulation11, angiogenesis12, metastasis12, chemoresistance13, and the development of eye diseases9, is increasingly recognized and has spurred a great interest in their utility in diagnostic, prognostic, therapeutic, and basic biology applications.
EVs can be classically categorized as exosomes, microvesicles, apoptotic bodies, oncosomes, ectosomes, microparticles, telerosomes, prostatosomes, cardiosomes, and vexosomes, etc., based on their biogenesis or cellular origin. For example, exosomes are formed in multivesicular bodies, whereas microvesicles are generated by budding directly from plasma membrane and apoptotic vesicles are from apoptotic or necrotic cells. However, the nomenclature is still under refined, partly due to a lack of thorough understanding and characterization of EVs. Several methods have been developed to purify EVs, including ultracentrifugation14, ultrafiltration15, magnetic beads16, polymeric precipitation17-19, and microfluidic techniques20-22. The most common procedure to purify EVs involves a series of centrifugations and/or filtration to remove large debris and other cellular contaminants, followed by a final high-speed ultracentrifugation, a process that is expensive, tedious, and nonspecific14,23,24. Unfortunately, technological need for rapid and reliable isolation of EVs with satisfactory purity and efficiency is not yet met. 
We have developed a paper-based immunoaffinity device that provides a simple, time- and cost-saving, yet efficient way to isolate and characterize subgroups of EVs22. Cellulose paper cut into a defined shape can be arranged and laminated using two plastic sheets with registered through-holes. In contrast to the general strategy to define the fluid boundary in paper-based devices by printing hydrophobic wax or polymers25-27, these laminated paper patterns are resistant to many organic liquids, including ethanol. Paper test zones are chemically modified to provide stable and dense coverage of capture molecules (e.g., target-specific antibodies) that have high affinity to specific surface markers on EV subgroups. Biological samples can be pipetted directly onto the paper test zones, and purified EVs are retained after rinse steps. Characterization of isolated EVs can be performed by SEM, ELISA, and transcriptomic analysis.

<table border="0" cellpadding="0" cellspacing="0">
	<tbody>
		<tr>
			<td>Chromatography Paper</td>
			<td>GE Healthcare Life Sciences</td>
			<td>3001-861</td>
			<td>&#160;Whatman&#174; Grade 1 cellulose paper</td>
		</tr>
		<tr>
			<td>(3-Mercaptopropyl) trimethoxysilane</td>
			<td>Sigma Aldrich</td>
			<td>175617</td>
			<td>This chemical reacts with water and moisture and should be applied inside a nitrogen-filled glove bag. Avoid eye and skin contact. Do not breathe fumes or inhale vapors.</td>
		</tr>
		<tr>
			<td>Ethanol</td>
			<td>Fisher Scientific</td>
			<td>BP2818</td>
			<td>Absolute, 200 Proof, molecular biology grade</td>
		</tr>
		<tr>
			<td>Bovine serum albumin (BSA)</td>
			<td>BioShop Canada Inc.</td>
			<td>ALB001</td>
			<td>Often referred to as Cohn fraction V.</td>
		</tr>
		<tr>
			<td>N-g-maleimidobutyryloxy succinimide ester (GMBS)</td>
			<td>Pierce Biotechnology</td>
			<td>22309</td>
			<td>GMBS is an amine-to-sulfhydryl crosslinker. GMBS is moisture-sensitive.</td>
		</tr>
		<tr>
			<td>Avidin</td>
			<td>Pierce Biotechnology</td>
			<td>31000</td>
			<td>NeutrAvidin has 4 binding sites for biotin and its pI value is 6.3, which is more neutral than native avidin</td>
		</tr>
		<tr>
			<td>Biotinylated mouse anti-human anti-CD63</td>
			<td>Ancell</td>
			<td>215-030</td>
			<td>clone AHN16.1/46-4-5</td>
		</tr>
		<tr>
			<td>biotinylated annexin V</td>
			<td>BD Biosciences</td>
			<td>556418</td>
			<td>Annxin V has a high affinity for phosphotidylserine (PS)</td>
		</tr>
		<tr>
			<td>Primary anti-CD9 and secondary antibody</td>
			<td>System Biosciences</td>
			<td>EXOAB-CD9A-1</td>
			<td>The secondary antibody is horseradish peroxidise-conjugated</td>
		</tr>
		<tr>
			<td>Serum separation tubes</td>
			<td>BD Biosciences</td>
			<td>367991</td>
			<td>Clot activator and gel for serum separation</td>
		</tr>
		<tr>
			<td>Annexin V binding buffer</td>
			<td>BD Biosciences</td>
			<td>556454</td>
			<td>10X; dilute to 1X prior to use.</td>
		</tr>
		<tr>
			<td>TMB substrate reagent set</td>
			<td>BD Biosciences</td>
			<td>555214</td>
			<td>The set contains hydrogen peroxide and 3,3&#8217;,5,5&#8217;-tetramethylbenzidine (TMB)</td>
		</tr>
		<tr>
			<td>RNA isolation kit</td>
			<td>Life Technologies</td>
			<td>AM1560</td>
			<td>MirVana RNA isolation kit</td>
		</tr>
		<tr>
			<td>Polyvinylpyrrolidone-based RNA isolation aid</td>
			<td>Life Technologies</td>
			<td>AM9690</td>
			<td>Plant RNA isolation aid contains polyvinylpyrrolidone (PVP) that binds to polysaccharides.</td>
		</tr>
		<tr>
			<td>RNA cleanup kit</td>
			<td>Qiagen Inc.</td>
			<td>74004</td>
			<td>MinElute RNA cleanup kit is designed for purification of up to 45 &#956;g RNA.</td>
		</tr>
		<tr>
			<td>Plasma chamber</td>
			<td>March Instruments</td>
			<td>PX-250</td>
			<td></td>
		</tr>
		<tr>
			<td>Scanning electron microscope</td>
			<td>Hitachi Ltd.</td>
			<td>S-4300</td>
			<td></td>
		</tr>
		<tr>
			<td>Desktop scanner</td>
			<td>Hewlett-Packard Company</td>
			<td>Photosmart B110</td>
			<td>8-bit color images were captured. Cameras and smart phones may be also used.</td>
		</tr>
		<tr>
			<td>Image-record system</td>
			<td>J&#38;H Technology Co</td>
			<td>GeneSys G:BOX Chemi-XX8</td>
			<td>16-bit fluroscence images were captured. Fluroscence microscopes may be also used.</td>
		</tr>
	</tbody>
</table>

paper-based devices for isolation and characterization of extracellular vesicles

Extracellulaire blaasjes (EV&#39;s), membraneuze deeltjes die vrijkomen uit verschillende soorten cellen, het bezit van een groot potentieel voor klinische toepassingen. Zij bevatten nucleïnezuur en eiwit lading en worden steeds meer erkend als een middel van intercellulaire communicatie gebruikt door zowel eukaryote en prokaryote cellen. Vanwege hun geringe omvang huidige protocollen voor isolatie van EV vaak tijdrovend, omslachtig en grote monstervolumes en dure apparatuur, zoals een ultracentrifuge nodig. Om deze beperkingen aan te pakken, ontwikkelden we een papieren immunoaffiniteit platform voor het scheiden van subgroepen van EV&#39;s dat is gemakkelijk, efficiënt, en vereist monster volumes zo laag als 10 pi. Biologische monsters kunnen direct worden gepipetteerd op papier testzones die chemisch zijn gewijzigd met capture moleculen die een hoge affiniteit voor specifieke EV oppervlakte markers hebben. We valideren de test met behulp van scanning elektronenmicroscopie (SEM), op papier gebaseerde enzym-gekoppelde immunosorbent assays (P-ELISA), en transcriptoomanalyse. Deze papieren apparaten zal de studie van EV&#39;s in de kliniek en de instelling onderzoek mogelijk maken om te helpen tot een beter begrip van de EV-functies in gezondheid en ziekte.

Het vermogen van het papier apparaat om subgroepen van EV&#39;s te isoleren efficiënt vertrouwt op haar gevoelige en specifieke erkenning van EV oppervlakte markers. De stabiele modificatie van papiervezels aan vangende moleculen is mogelijk door avidine-biotine chemie zoals elders 28-30 beschreven. De effectiviteit van chemische conjugatie en dat van de fysisorptie werkwijze wordt beoordeeld op basis fluorescentie gebaseerde uitlezingen. Het papier testzones worden bereid volgens het protocol stap 1), behal...

Watch this Scientific Journal Video about Paper-based Devices for Isolation and Characterization of Extracellular Vesicles at JoVE.com

Paper-based Devices for Isolation and Characterization of Extracellular Vesicles

Dit protocol Gegevens methode extracellulaire blaasjes (EV), kleine membraneuze deeltjes vrijgemaakt uit cellen te isoleren, van slechts 10 pl serummonsters. Deze benadering omzeilt de noodzaak van ultracentrifugatie, vereist slechts enkele minuten testtijd en maakt de isolatie van EV uit monsters van beperkte omvang.

Papieren Inrichtingen voor isolatie en karakterisering van extracellulaire blaasjes

Extracellular vesicles (EVs), membranous particles released from various types of cells, hold a great potential for clinical applications. They contain ...

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Bioengineering

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