Name: lc-ms analysis of human platelets as a platform for studying mitochondrial metabolism
Uploaded: 2016-04-04T15:00:00
Description: Watch this Scientific Journal Video about LC-MS Analysis of Human Platelets as a Platform for Studying Mitochondrial Metabolism at JoVE.com

Vi erkänner stöd av NIH bidrag P30ES013508 och T32ES019851.

Etik uttalande: Alla protokoll som rör behandlingen av humana prover följa riktlinjerna i University of Pennsylvania forskningsetiska kommittén människa. 1. Framställning av buffertar och 100x förrådslösningar <ol><li> Förbereda ett L av bas Tyrodes buffert. Kombinera 8,123 g NaCl, 1,428 g NaHCO 3, 0,466 g CaCl2 ∙ 2 H2O, 0,224 g KCl, och 0,095 g MgCl 2. Justera totalvolymen till 1 L med DDH 2 O. Filter sterilisera bas Tyrode...

<ol>
	<li>Ault, K. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=The+clinical+utility+of+flow+cytometry+in+the+study+of+platelets.">The clinical utility of flow cytometry in the study of platelets.</a> Semin. Hematol. 38 (2), 160-168 (2001).</li><li>Avila, C., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Platelet+mitochondrial+dysfunction+is+evident+in+type+2+diabetes+in+association+with+modifications+of+mitochondrial+anti-oxidant+stress+proteins.">Platelet mitochondrial dysfunction is evident in type 2 diabetes in association with modifications of mitochondrial anti-oxidant stress proteins.</a> Exp. Clin. Endocrinol. Diabetes. 120 (4), 248-251 (2012).</li><li>Basu, S. S., Blair, I. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Rotenone-mediated+changes+in+intracellular+coenzyme+A+thioester+levels:+implications+for+mitochondrial+dysfunction.">Rotenone-mediated changes in intracellular coenzyme A thioester levels: implications for mitochondrial dysfunction.</a> Chem. Res. Toxicol. 24 (10), 1630-1632 (2011).</li><li>Basu, S. S., Blair, I. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=SILEC:+a+protocol+for+generating+and+using+isotopically+labeled+coenzyme+A+mass+spectrometry+standards.">SILEC: a protocol for generating and using isotopically labeled coenzyme A mass spectrometry standards.</a> Nat. Protoc. 7 (1), 1-12 (2012).</li><li>Basu, S. S., Deutsch, E. C., Schmaier, A. A., Lynch, D. R., Blair, I. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Human+platelets+as+a+platform+to+monitor+metabolic+biomarkers+using+stable+isotopes+and+LC-MS.">Human platelets as a platform to monitor metabolic biomarkers using stable isotopes and LC-MS.</a> Bioanalysis. 5 (24), 3009-3021 (2013).</li><li>Berson, A., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Mechanisms+for+experimental+buprenorphine+hepatotoxicity:+major+role+of+mitochondrial+dysfunction+versus+metabolic+activation.">Mechanisms for experimental buprenorphine hepatotoxicity: major role of mitochondrial dysfunction versus metabolic activation.</a> J. Hepatol. 34 (2), 261-269 (2001).</li><li>Castell, J. V., Jover, R., Martinez-Jimenez, C. P., Gomez-Lechon, M. J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Hepatocyte+cell+lines:+their+use,+scope+and+limitations+in+drug+metabolism+studies.">Hepatocyte cell lines: their use, scope and limitations in drug metabolism studies.</a> Expert. Opin. Drug Metab Toxicol. 2 (2), 183-212 (2006).</li><li>Ciccimaro, E., Blair, I. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Stable-isotope+dilution+LC-MS+for+quantitative+biomarker+analysis.">Stable-isotope dilution LC-MS for quantitative biomarker analysis.</a> Bioanalysis. 2 (2), 311-341 (2010).</li><li>Dang, C. V. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Links+between+metabolism+and+cancer.">Links between metabolism and cancer.</a> Genes Dev. 26 (9), 877-890 (2012).</li><li>Darnell, M., Weidolf, L. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Metabolism+of+xenobiotic+carboxylic+acids:+focus+on+coenzyme+A+conjugation,+reactivity,+and+interference+with+lipid+metabolism.">Metabolism of xenobiotic carboxylic acids: focus on coenzyme A conjugation, reactivity, and interference with lipid metabolism.</a> Chem. Res. Toxicol. 26 (8), 1139-1155 (2013).</li><li>Des Rosiers, C., Fernandez, C. A., David, F., Brunengraber, H. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Reversibility+of+the+mitochondrial+isocitrate+dehydrogenase+reaction+in+the+perfused+rat+liver.+Evidence+from+isotopomer+analysis+of+citric+acid+cycle+intermediates.">Reversibility of the mitochondrial isocitrate dehydrogenase reaction in the perfused rat liver. Evidence from isotopomer analysis of citric acid cycle intermediates.</a> J. Biol. Chem. 269 (44), 27179-27182 (1994).</li><li>Ellis, J. K., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Metabolic+profiling+detects+early+effects+of+environmental+and+lifestyle+exposure+to+cadmium+in+a+human+population.">Metabolic profiling detects early effects of environmental and lifestyle exposure to cadmium in a human population.</a> BMC. Med. 10, 61 (2012).</li><li>Grevengoed, T. J., Klett, E. L., Coleman, R. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Acyl-CoA+metabolism+and+partitioning.">Acyl-CoA metabolism and partitioning.</a> Annu. Rev. Nutr. 34, 1-30 (2014).</li><li>Haynes, C. A., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Quantitation+of+fatty+acyl-coenzyme+As+in+mammalian+cells+by+liquid+chromatography-electrospray+ionization+tandem+mass+spectrometry.">Quantitation of fatty acyl-coenzyme As in mammalian cells by liquid chromatography-electrospray ionization tandem mass spectrometry.</a> J. Lipid Res. 49 (5), 1113-1125 (2008).</li><li>Ikegawa, S., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Characterization+of+cholyl-adenylate+in+rat+liver+microsomes+by+liquid+chromatography/electrospray+ionization-mass+spectrometry.">Characterization of cholyl-adenylate in rat liver microsomes by liquid chromatography/electrospray ionization-mass spectrometry.</a> Anal. Biochem. 266 (1), 125-132 (1999).</li><li>Kalghatgi, S., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Bactericidal+antibiotics+induce+mitochondrial+dysfunction+and+oxidative+damage+in+Mammalian+cells.">Bactericidal antibiotics induce mitochondrial dysfunction and oxidative damage in Mammalian cells.</a> Sci. Transl. Med. 5 (192), 192ra85 (2013).</li><li>Liu, X., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=High-Resolution+Metabolomics+with+Acyl-CoA+Profiling+Reveals+Widespread+Remodeling+in+Response+to+Diet.">High-Resolution Metabolomics with Acyl-CoA Profiling Reveals Widespread Remodeling in Response to Diet.</a> Mol. Cell Proteomics. 14 (6), 1489-1500 (2015).</li><li>Lopez-Gallardo, E., Iceta, R., Iglesias, E., Montoya, J., Ruiz-Pesini, E. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=OXPHOS+toxicogenomics+and+Parkinson's+disease.">OXPHOS toxicogenomics and Parkinson's disease.</a> Mutat. Res. 728 (3), 98-106 (2011).</li><li>Magnes, C., Sinner, F. M., Regittnig, W., Pieber, T. R. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=LC/MS/MS+method+for+quantitative+determination+of+long-chain+fatty+acyl-CoAs.">LC/MS/MS method for quantitative determination of long-chain fatty acyl-CoAs.</a> Anal. Chem. 77 (9), 2889-2894 (2005).</li><li>Mauriala, T., Herzig, K. H., Heinonen, M., Idziak, J., Auriola, S. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Determination+of+long-chain+fatty+acid+acyl-coenzyme+A+compounds+using+liquid+chromatography-electrospray+ionization+tandem+mass+spectrometry.">Determination of long-chain fatty acid acyl-coenzyme A compounds using liquid chromatography-electrospray ionization tandem mass spectrometry.</a> J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 808 (2), 263-268 (2004).</li><li>Murphy, T. A., Dang, C. V., Young, J. D. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Isotopically+nonstationary+13C+flux+analysis+of+Myc-induced+metabolic+reprogramming+in+B-cells.">Isotopically nonstationary 13C flux analysis of Myc-induced metabolic reprogramming in B-cells.</a> Metab Eng. 15, 206-217 (2013).</li><li>Paglia, G., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Metabolomic+analysis+of+platelets+during+storage:+a+comparison+between+apheresis-+and+buffy+coat-derived+platelet+concentrates.">Metabolomic analysis of platelets during storage: a comparison between apheresis- and buffy coat-derived platelet concentrates.</a> Transfusion. 55 (2), 301-313 (2015).</li><li>Patti, G. J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Separation+strategies+for+untargeted+metabolomics.">Separation strategies for untargeted metabolomics.</a> J. Sep. Sci. 34 (24), 3460-3469 (2011).</li><li>Robishaw, J. D., Neely, J. R. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Coenzyme+A+metabolism.">Coenzyme A metabolism.</a> Am. J. Physiol. 248 (1 Pt 1), E1-E9 (1985).</li><li>Rodgers, G. M. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Overview+of+platelet+physiology+and+laboratory+evaluation+of+platelet+function.">Overview of platelet physiology and laboratory evaluation of platelet function.</a> Clin. Obstet. Gynecol. 42 (2), 349-359 (1999).</li><li>Salles, I., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Development+of+a+high-throughput+ELISA+assay+for+platelet+function+testing+using+platelet-rich+plasma+or+whole+blood.">Development of a high-throughput ELISA assay for platelet function testing using platelet-rich plasma or whole blood.</a> Thromb. Haemost. 104 (2), 392-401 (2010).</li><li>Snyder, N. W., Basu, S. S., Worth, A. J., Mesaros, C., Blair, I. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Metabolism+of+propionic+acid+to+a+novel+acyl-coenzyme+A+thioester+by+mammalian+cell+lines+and+platelets.">Metabolism of propionic acid to a novel acyl-coenzyme A thioester by mammalian cell lines and platelets.</a> J. Lipid Res. 56 (1), 142-150 (2015).</li><li>Snyder, N. W., Basu, S. S., Zhou, Z., Worth, A. J., Blair, I. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Stable+isotope+dilution+liquid+chromatography/mass+spectrometry+analysis+of+cellular+and+tissue+medium-+and+long-chain+acyl-coenzyme+A+thioesters.">Stable isotope dilution liquid chromatography/mass spectrometry analysis of cellular and tissue medium- and long-chain acyl-coenzyme A thioesters.</a> Rapid Commun. Mass Spectrom. 28 (16), 1840-1848 (2014).</li><li>Snyder, N. W., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Production+of+stable+isotope-labeled+acyl-coenzyme+A+thioesters+by+yeast+stable+isotope+labeling+by+essential+nutrients+in+cell+culture.">Production of stable isotope-labeled acyl-coenzyme A thioesters by yeast stable isotope labeling by essential nutrients in cell culture.</a> Anal. Biochem. 474, 59-65 (2015).</li><li>Wallace, D. C. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Mitochondrial+diseases+in+man+and+mouse.">Mitochondrial diseases in man and mouse.</a> Science. 283 (5407), 1482-1488 (1999).</li><li>Wojtovich, A. P., Brookes, P. S. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=The+complex+II+inhibitor+atpenin+A5+protects+against+cardiac+ischemia-reperfusion+injury+via+activation+of+mitochondrial+KATP+channels.">The complex II inhibitor atpenin A5 protects against cardiac ischemia-reperfusion injury via activation of mitochondrial KATP channels.</a> Basic Res. Cardiol. 104 (2), 121-129 (2009).</li><li>Worth, A. J., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Stable+isotopes+and+LC-MS+for+monitoring+metabolic+disturbances+in+Friedreich's+ataxia+platelets.">Stable isotopes and LC-MS for monitoring metabolic disturbances in Friedreich's ataxia platelets.</a> Bioanalysis. 7 (15), 1843-1855 (2015).</li><li>Worth, A. J., Basu, S. S., Snyder, N. W., Mesaros, C., Blair, I. A. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Inhibition+of+neuronal+cell+mitochondrial+complex+I+with+rotenone+increases+lipid+beta-oxidation,+supporting+acetyl-coenzyme+A+levels.">Inhibition of neuronal cell mitochondrial complex I with rotenone increases lipid beta-oxidation, supporting acetyl-coenzyme A levels.</a> J. Biol. Chem. 289 (39), 26895-26903 (2014).</li><li>Zhou, L., Schmaier, A. H. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Platelet+aggregation+testing+in+platelet-rich+plasma:+description+of+procedures+with+the+aim+to+develop+standards+in+the+field.">Platelet aggregation testing in platelet-rich plasma: description of procedures with the aim to develop standards in the field.</a> Am. J. Clin. Pathol. 123 (2), 172-183 (2005).</li></ol>

Här har vi visat användbarheten av isolerade blodplättar som en plattform för att studera perturbed mitokondriell metabolism. Specifikt har vi karaktäriseras metabolic anpassning som svar på komplexa I hämning av rotenon. Den aktuella studien har förlängt tidigare rapporterade resultaten på sig rollen av komplexa I hämning av rotenon i cellinjer till humana blodplättar. Viktigt har detta visat att rotenon också hämmade trombocyter succinyl-CoA bildning, stimulerade en ökning a...

Dysfunktionell mitokondriell metabolism har varit inblandad i ett stort antal olika sjukdomar inkluderande neurodegeneration, cancer och hjärt-kärlsjukdom 30. Som sådan har stora ansträngningar lagts på att karakterisera metaboliska defekter som bidrar till sjukdomen patogenes. Vätskekromatografi-tandem masspektrometri (LC-MS / MS) anses vara den gyllene standarden för kvantifiering av analyter från komplexa biologiska matriser och ofta används för metaboliska studier 8. Men som ofta är fallet med biomedicinska studier, uppnå en tillgänglig och väldefinierad modell gäller människors sjukdom är en utmaning. Många studier anställer omvandlas cellulära modeller för sondera effekterna av xenobiotika eller genetiska avvikelser på cellulär metabolism 7,9. Den metaboliska omprogrammering som sker i cancerceller kan införa confoundingfaktorer 21 och är därför inte idealiskt. Dessa frågor kan vara circumvented med primära cellmodeller, men att få tillräckligt med biomassa för metabola analyser kan vara en utmaning. Dessutom har effekterna av höga halter av antibiotika som används i odling lyfts fram som potentiellt störande mitokondrie studier 16. Humana blodplättar ge möjlighet att utnyttja en primär cellmodell med tillräcklig mitokondrie innehåll för metaboliska studier 5,22,27,32. För det första kan trombocyter lätt förvärvas genom bloddragningar från enskilda givare, eller i stora volymer från blodbanker, och ger därmed en modell där externa faktorer kan lätt kontrolleras. För det andra, på grund av sin ringa storlek, blodplättar kan lätt isoleras från andra blodkomponenter med minimal förberedande arbete med minimalt utrustade laboratorier 5. Notera gör blodplättar innehåller kärnor och kan därför användas för att studera förändringar i metabolism oberoende av transkriptionell reglering. Här visar vi attförutom relativ kvantifiering av acyl-koenzym A (CoA) tioestrar, kan isoleras systemet plätt användas för att undersöka kolmetabolism. Specifikt rapporterar vi användning av metabolisk märkning med stabil isotop (icke-radioaktiv) märkt [13 C 6] glukos och [13 C 16] -palmitate att sondera inkorporering av [13 C] -märkt i den viktiga metaboliten acetyl- CoA via glykolys eller fettsyra oxidation. Detta ger ett kraftfullt, generaliserbar och mångsidig plattform på grund av den omfattande engagemang av acyl-CoA arter i biokemiska vägar 13,24 och spårbarhet av detta system att testa andra variabler, såsom hämning av komplex I med rotenon 3,33. Förutom de uppgifter som lämnats i protokollet nedan kan hittas en omfattande beskrivning av de metoder som används för isotopmärkning och för LC-MS-baserade analyser i Basu och Blair 4.

<table border="0" cellpadding="0" cellspacing="0" width="406">
	<tbody>
		<tr height="21">
			<td height="21" style="height:21px;width:161px;">Reagent</td>
			<td style="width:92px;"></td>
			<td style="width:68px;"></td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Sodium Chloride (NaCl)</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">746398</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Sodium Bicarbonate (NaHCO3)</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">S5761</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Calcium Chloride Dihydrate (CaCl2 * H2O)</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">223506</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Potassium Chloride (KCl)</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">P9541</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Magnesium Chloride (MgCl2)</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">208337</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Glucose</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">G8270</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">13C6-Glucose</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td>389374</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Palmitic acid</td>
			<td style="width:92px;">Cayman</td>
			<td style="width:68px;">10006627</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">13C16-Palmitic Acid</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">605573</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Rotenone</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">R8875</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Trichloro Acetic Acid</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">T6399</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">5-Sulfosalicylic Acid</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">390275</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Acetonitirle</td>
			<td style="width:92px;">Fischer Scientific</td>
			<td style="width:68px;">A996-4</td>
			<td style="width:85px;">(optima)</td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Water (H2O)</td>
			<td style="width:92px;">Fischer Scientific</td>
			<td style="width:68px;">W7-4</td>
			<td style="width:85px;">(optima)</td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Formic acid</td>
			<td style="width:92px;">Fischer Scientific</td>
			<td style="width:68px;">85171</td>
			<td style="width:85px;">(optima)</td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Dimethyl Sulfoxide</td>
			<td style="width:92px;">Sigma-Aldrich</td>
			<td style="width:68px;">472301</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Ethanol</td>
			<td style="width:92px;">Fischer Scientific</td>
			<td style="width:68px;">04-355-222</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Methanol</td>
			<td style="width:92px;">Fischer Scientific</td>
			<td style="width:68px;">A454-4</td>
			<td style="width:85px;">(optima)</td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Ammonium Acetate</td>
			<td style="width:92px;">Fischer Scientific</td>
			<td style="width:68px;">A639-500</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">2 mL Eppendorf Tubes</td>
			<td style="width:92px;">BioExpress</td>
			<td style="width:68px;">C-3229-1</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">LC vials (plastic)</td>
			<td style="width:92px;">Waters</td>
			<td style="width:68px;">186002640</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">10 mL Glass Centrifuge Tubes</td>
			<td style="width:92px;">Kimble Chase</td>
			<td style="width:68px;">73785-10</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Oasis Solid Phase Extraxtion (SPE) Columns</td>
			<td style="width:92px;">Waters</td>
			<td style="width:68px;">WAT094225</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="29">
			<td height="29" style="height:29px;width:161px;">Pastuer Pipets</td>
			<td style="width:92px;">Fischer Scientific</td>
			<td style="width:68px;">13-678-200</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="31">
			<td height="31" style="height:31px;width:161px;">Name</td>
			<td style="width:92px;">Company</td>
			<td style="width:68px;">Catalog Number</td>
			<td style="width:85px;">Comments</td>
		</tr>
		<tr height="21">
			<td height="21" style="height:21px;width:161px;">Equipment</td>
			<td style="width:92px;"></td>
			<td style="width:68px;"></td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="30">
			<td height="30" style="height:30px;width:161px;">CO2 Water-Jacketed Incubator</td>
			<td style="width:92px;">Nuaire</td>
			<td style="width:68px;">AutoFlow NU-8500</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="45">
			<td height="45" style="height:45px;width:161px;">Triple Quadropole Mass Spectrometer</td>
			<td style="width:92px;">Thermo Scientific</td>
			<td style="width:68px;">Finnigan TSQ Quantum</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="45">
			<td height="45" style="height:45px;width:161px;">HPLC</td>
			<td style="width:92px;">Thermo Scientific</td>
			<td style="width:68px;">Dionex Ultimate 3000</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="21">
			<td height="21" style="height:21px;width:161px;">Source</td>
			<td style="width:92px;">Thermo Scientific</td>
			<td style="width:68px;">HESI II</td>
			<td style="width:85px;"></td>
		</tr>
		<tr height="46">
			<td height="46" style="height:46px;width:161px;">HPLC Column</td>
			<td style="width:92px;">Phenomenex</td>
			<td style="width:68px;">Luna C18</td>
			<td style="width:85px;">3 &#956;m particle size, 200 mm x 2 mm</td>
		</tr>
	</tbody>
</table>

lc-ms analysis of human platelets as a platform for studying mitochondrial metabolism

Perturbed mitochondrial metabolism has received renewed interest as playing a causative role in a range of diseases. Probing alterations to metabolic pathways requires a model in which external factors can be well controlled, allowing for reproducible and meaningful results. Many studies employ transformed cellular models for these purposes; however, metabolic reprogramming that occurs in many cancer cell lines may introduce confounding variables. For this reason primary cells are desirable, though attaining adequate biomass for metabolic studies can be challenging. Here we show that human platelets can be utilized as a platform to carry out metabolic studies in combination with liquid chromatography-tandem mass spectrometry analysis. This approach is amenable to relative quantification and isotopic labeling to probe the activity of specific metabolic pathways. Availability of platelets from individual donors or from blood banks makes this model system applicable to clinical studies and feasible to scale up. Here we utilize isolated platelets to confirm previously identified compensatory metabolic shifts in response to the complex I inhibitor rotenone. More specifically, a decrease in glycolysis is accompanied by an increase in fatty acid oxidation to maintain acetyl-CoA levels. Our results show that platelets can be used as an easily accessible and medically relevant model to probe the effects of xenobiotics on cellular metabolism.

För att demonstrera användbarheten av denna metod har vi återskapat generaliserbarhet av tidigare beskrivna kompensations metabolisk anpassning till följd av exponering för rotenon. Denna upptäckt har tidigare identifierats i cellodlingsmodeller och undersökningen syftade till att testa om denna metaboliska förändring sker också i blodplättar, som är anuclear och inte benägna att samma experimentella artefakter som cellodling. Detta arbete utfördes med sex dagar gamla tromb...

Watch this Scientific Journal Video about LC-MS Analysis of Human Platelets as a Platform for Studying Mitochondrial Metabolism at JoVE.com

LC-MS Analysis of Human Platelets as a Platform for Studying Mitochondrial Metabolism

Här visar vi isolerade humana trombocyter kan användas som en tillgänglig ex vivo modell för att studera metaboliska anpassningar som svar på det komplexa I-inhibitor rotenon. Detta tillvägagångssätt utnyttjar isotopisk spårning och relativ kvantifiering genom vätskekromatografi-masspektrometri och kan appliceras på en mängd olika studiedesign.

LC-MS-analys av humana blodplättar som en plattform för att studera Mitochondrial Metabolism

Perturbed mitochondrial metabolism has received renewed interest as playing a causative role in a range of diseases. Probing alterations to metabolic ...

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SCIENTISTS IN ACTION

Technique for Studying Arthropod and Microbial Communities within Tree Tissues

Teknik för att studera leddjur och mikrobiella samhällen inom Tree vävnader

Phloem tissues of pine are habitats for many thousands of organisms.  Arthropods and microbes use phloem and cambium tissues to seek mates, lay eggs, rear ...

Transient Gene Expression in Tobacco using Gibson Assembly and the Gene Gun

Transient genuttryck i Tobaks använder Gibson församling och Gene Gun

In order to target a single protein to multiple subcellular organelles, plants typically duplicate the relevant genes, and express each gene separately ...

Use of Chironomidae (Diptera) Surface-Floating Pupal Exuviae as a Rapid Bioassessment Protocol for Water Bodies

Use of Chironomidae Diptera Surface-Floating Pupal Exuviae as a Rapid Bioassessment Protocol for Water Bodies

Användning av Chironomidae (Diptera) Utanpå Flytande PUPP exuviae som en snabb Bioassessment protokoll för vattenförekomster

Rapid bioassessment protocols using benthic macroinvertebrate assemblages have been successfully used to assess human impacts on water quality. ...

Modification and Application of a Leaf Blower-vac for Field Sampling of Arthropods

Modifiering och tillämpning av en lövblåsare-vac för fältprovtagning av leddjur

Rice fields host a large diversity of arthropods, but investigating their population dynamics and interactions is challenging. Here we describe the ...

Thermal Scanning Conductometry (TSC) as a General Method for Studying and Controlling the Phase Behavior of Conductive Physical Gels

Thermal Scanning Conductometry TSC as a General Method for Studying and Controlling the Phase Behavior of Conductive Physical Gels

Thermal skanning Conductometry (TSC) som en allmän metod för att studera och styra beteendet fas av konduktiv fysiska geler

The thermal scanning conductometry protocol is a new approach in studying ionic gels based on low molecular weight gelators. The method is designed to ...

Quantifying Plant Soluble Protein and Digestible Carbohydrate Content, Using Corn (Zea mays) As an Exemplar

Quantifying Plant Soluble Protein and Digestible Carbohydrate Content, Using Corn Zea mays As an Exemplar

Kvantifiera växt lösligt Protein och lättsmält kolhydrat innehåll, med hjälp av majs (Zea mays) som ett föredöme

Elemental data are commonly used to infer plant quality as a resource to herbivores. However, the ubiquity of carbon in biomolecules, the presence of ...

Studying Neurobehavioral Effects of Environmental Pollutants on Zebrafish Larvae

Studera neurobeteendeeffekter av miljöföroreningar på zebrafisk larver

Recent years more and more environmental pollutants have been proved neurotoxic, especially at the early development stages of organisms. Zebrafish larvae ...

The Effect of Construction and Demolition Waste Plastic Fractions on Wood-Polymer Composite Properties

Effekten av konstruktion och rivningsavfall plastfraktioner på trä-Polymer komposit egenskaper

Construction and demolition waste (CDW), including valuable materials such as plastics, have a remarkable influence on the waste sector. In order for ...

A Gnotobiotic System for Studying Microbiome Assembly in the Phyllosphere and in Vegetable Fermentation

Ett gnotobiotiskt system för att studera mikrobiomet montering i phyllosphere och i vegetabilisk jäsning

The phyllosphere, the above ground portion of the plant that can be colonized by microbes, is a useful model system to identify processes of microbial ...

Microplot Design and Plant and Soil Sample Preparation for 15Nitrogen Analysis

Microplot Design and Plant and Soil Sample Preparation for 15Nitrogen Analysis

Mikroplot Design och växt-och jordprov beredning för 15kväveanalys

Many&#160;nitrogen fertilizer studies evaluate the overall effect of a treatment on end-of-season measurements such as grain yield or cumulative N losses. ...