Doil Choi

Identification of the down-regulated genes in a mat1-2-deleted strain of Gibberella zeae, using cDNA subtraction and microarray analysis.

Bases of biocontrol: sequence predicts synthesis and mode of action of agrocin 84, the Trojan horse antibiotic that controls crown gall.

Exploitation of pepper EST-SSRs and an SSR-based linkage map.

Transcriptional regulation of the respiratory genes in the cyanobacterium Synechocystis sp. PCC 6803 during the early response to glucose feeding.

Integration of cytogenetic and genetic linkage maps unveils the physical architecture of tomato chromosome 2.

The Tomato Sequencing Project, the first cornerstone of the International Solanaceae Project (SOL).

BAC-derived markers converted from RFLP linked to Phytophthora capsici resistance in pepper (Capsicum annuum L.).

Pepper EST database: comprehensive in silico tool for analyzing the chili pepper (Capsicum annuum) transcriptome.

SNUGB: a versatile genome browser supporting comparative and functional fungal genomics.

Evolution of ribosomal DNA-derived satellite repeat in tomato genome.

In planta expression screens of Phytophthora infestans RXLR effectors reveal diverse phenotypes, including activation of the Solanum bulbocastanum disease resistance protein Rpi-blb2.

Fine mapping of pepper trichome locus 1 controlling trichome formation in Capsicum annuum L. CM334.

Molecular mapping and characterization of a single dominant gene controlling CMV resistance in peppers (Capsicum annuum L.).

CaMsrB2, pepper methionine sulfoxide reductase B2, is a novel defense regulator against oxidative stress and pathogen attack.

Characterization and genetic analysis of a low-temperature-sensitive mutant, sy-2, in Capsicum chinense.

Trichome density of main stem is tightly linked to PepMoV resistance in chili pepper (Capsicum annuum L.).

Comparative analysis of pepper and tomato reveals euchromatin expansion of pepper genome caused by differential accumulation of Ty3/Gypsy-like elements.

Positive-selection and ligation-independent cloning vectors for large scale in planta expression for plant functional genomics.

Use of a secretion trap screen in pepper following Phytophthora capsici infection reveals novel functions of secreted plant proteins in modulating cell death.

A common plant cell-wall protein HyPRP1 has dual roles as a positive regulator of cell death and a negative regulator of basal defense against pathogens.

Evolution of the large genome in Capsicum annuum occurred through accumulation of single-type long terminal repeat retrotransposons and their derivatives.

Ectopic expression of Capsicum-specific cell wall protein Capsicum annuum senescence-delaying 1 (CaSD1) delays senescence and induces trichome formation in Nicotiana benthamiana.

RNA-seq pinpoints a Xanthomonas TAL-effector activated resistance gene in a large-crop genome.

Intraspecies differences in cold hardiness, carbohydrate content and β-amylase gene expression of Vaccinium corymbosum during cold acclimation and deacclimation.

A pepper (Capsicum annuum L.) metacaspase 9 (Camc9) plays a role in pathogen-induced cell death in plants.

Multiple classes of immune-related proteases associated with the cell death response in pepper plants.

The hot pepper (Capsicum annuum) microRNA transcriptome reveals novel and conserved targets: a foundation for understanding MicroRNA functional roles in hot pepper.

Capsicum annuum homeobox 1 (CaHB1) is a nuclear factor that has roles in plant development, salt tolerance, and pathogen defense.

Identification of novel pepper genes involved in Bax- or INF1-mediated cell death responses by high-throughput virus-induced gene silencing.

Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species.

Major repeat components covering one-third of the ginseng (Panax ginseng C.A. Meyer) genome and evidence for allotetraploidy.

Identification of gene-specific polymorphisms and association with capsaicin pathway metabolites in Capsicum annuum L. collections.

A simple method for screening of plant NBS-LRR genes that confer a hypersensitive response to plant viruses and its application for screening candidate pepper genes against Pepper mottle virus.

Rpi-blb2-mediated late blight resistance in Nicotiana benthamiana requires SGT1 and salicylic acid-mediated signaling but not RAR1 or HSP90.

A pepper MSRB2 gene confers drought tolerance in rice through the protection of chloroplast-targeted genes.

dbCRY: a Web-based comparative and evolutionary genomics platform for blue-light receptors.

Cucumber Pti1-L is a cytoplasmic protein kinase involved in defense responses and salt tolerance.

Multiple recognition of RXLR effectors is associated with nonhost resistance of pepper against Phytophthora infestans.

Combined use of bulked segregant analysis and microarrays reveals SNP markers pinpointing a major QTL for resistance to Phytophthora capsici in pepper.

Tomato Male sterile 1035 is essential for pollen development and meiosis in anthers.

Rpi-blb2-Mediated Hypersensitive Cell Death Caused by Phytophthora infestans AVRblb2 Requires SGT1, but not EDS1, NDR1, Salicylic Acid-, Jasmonic Acid-, or Ethylene-Mediated Signaling.

Integrative structural annotation of de novo RNA-Seq provides an accurate reference gene set of the enormous genome of the onion (Allium cepa L.).

RNA-dependent RNA polymerase (NIb) of the potyviruses is an avirulence factor for the broad-spectrum resistance gene Pvr4 in Capsicum annuum cv. CM334.

Molecular characterization of Pvr9 that confers a hypersensitive response to Pepper mottle virus (a potyvirus) in Nicotiana benthamiana.

De Novo Transcriptome Analysis to Identify Anthocyanin Biosynthesis Genes Responsible for Tissue-Specific Pigmentation in Zoysiagrass (Zoysia japonica Steud.).

Recent progresses on functional genomics in plant defense.

Identification of candidate genes associated with fertility restoration of cytoplasmic male-sterility in onion (Allium cepa L.) using a combination of bulked segregant analysis and RNA-seq.

Metabolomic Characterization of Hot Pepper (Capsicum annuum "CM334") during Fruit Development.

Molecular marker development and genetic diversity exploration by RNA-seq in Platycodon grandiflorum.

Major Quantitative Trait Loci and Putative Candidate Genes for Powdery Mildew Resistance and Fruit-Related Traits Revealed by an Intraspecific Genetic Map for Watermelon (Citrullus lanatus var. lanatus).

An ultra-high-density bin map facilitates high-throughput QTL mapping of horticultural traits in pepper (Capsicum annuum).

Virus-induced gene silencing reveals signal transduction components required for the Pvr9-mediated hypersensitive response in Nicotiana benthamiana.

Fine mapping of Restorer-of-fertility in pepper (Capsicum annuum L.) identified a candidate gene encoding a pentatricopeptide repeat (PPR)-containing protein.

Superoxide serves as a putative signal molecule for plant cell division: overexpression of CaRLK1 promotes the plant cell cycle via accumulation of O and decrease in H O.

Comparative analyses of ubiquitin-like ATG8 and cysteine protease ATG4 autophagy genes in the plant lineage and cross-kingdom processing of ATG8 by ATG4.

Genome-Wide Comparative Analyses Reveal the Dynamic Evolution of Nucleotide-Binding Leucine-Rich Repeat Gene Family among Solanaceae Plants.

Divergent evolution of multiple virus-resistance genes from a progenitor in Capsicum spp.

Genome-wide analysis of Dof transcription factors reveals functional characteristics during development and response to biotic stresses in pepper.

Genome-Wide Divergence and Linkage Disequilibrium Analyses for Revealed by Genome-Anchored Single Nucleotide Polymorphisms.

Genome-wide Diversity and Association Mapping for Capsaicinoids and Fruit Weight in Capsicum annuum L.

Current Understandings of Plant Nonhost Resistance.

Genome analysis of Hibiscus syriacus provides insights of polyploidization and indeterminate flowering in woody plants.

Harnessing anthocyanin-rich fruit: a visible reporter for tracing virus-induced gene silencing in pepper fruit.

Spatiotemporal Monitoring of Effectors via Type III Secretion Using Split Fluorescent Protein Fragments.

Expansion of sesquiterpene biosynthetic gene clusters in pepper confers nonhost resistance to the Irish potato famine pathogen.

Nicotiana benthamiana Matrix Metalloprotease 1 (NMMP1) gene confers disease resistance to Phytophthora infestans in tobacco and potato plants.

Fine mapping of the genic male-sterile ms gene in Capsicum annuum L.

New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication.

HSP70s Enhance a Phytophthora infestans Effector-Induced Cell Death via an MAPK Cascade in Nicotiana benthamiana.

Suppression or Activation of Immune Responses by Predicted Secreted Proteins of the Soybean Rust Pathogen Phakopsora pachyrhizi.

Molecular Mapping of , a Novel Locus Conferring Resistance to Powdery Mildew in Pepper ().

Identification of a molecular marker tightly linked to bacterial wilt resistance in tomato by genome-wide SNP analysis.

New role of LTR-retrotransposons for emergence and expansion of disease-resistance genes and high-copy gene families in plants.

Genome and evolution of the shade-requiring medicinal herb Panax ginseng.

Coiled-coil and leucine-rich repeat domain of the potyvirus resistance protein, Pvr4, has distinct role in signaling and pathogen recognition.