Jeremiah J. Zartman

Department of Chemical and Biomolecular Engineering, University of Notre Dame

Research Area

BioengineeringBiology

Biography

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JoVE Journal Publications

ArticleTotal : 2	Year
Publication title	2019
Publication title	2024

Other Publications

Article	Year
Pattern formation by a moving morphogen source. Physical biology\| PubMed ID: 21750363	2011
Coordination of patterning and growth by the morphogen DPP. Current biology : CB\| PubMed ID: 24650915	2014
Sizing it up: the mechanical feedback hypothesis of organ growth regulation. Seminars in cell & developmental biology\| PubMed ID: 25020200	2014
An inverse small molecule screen to design a chemically defined medium supporting long-term growth of Drosophila cell lines. Molecular bioSystems\| PubMed ID: 25096480	2014
Spatiotemporal patterning of polyamines in Drosophila development. Amino acids\| PubMed ID: 26386564	2015
Capabilities and Limitations of Tissue Size Control through Passive Mechanical Forces. PLoS computational biology\| PubMed ID: 26713738	2015
Cultivation and Live Imaging of Drosophila Imaginal Discs. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 27730583	2016
Robust cell tracking in epithelial tissues through identification of maximum common subgraphs. Journal of the Royal Society, Interface\| PubMed ID: 28334699	2016
Multi-scale computational study of the mechanical regulation of cell mitotic rounding in epithelia. PLoS computational biology\| PubMed ID: 28531187	2017
Release of Applied Mechanical Loading Stimulates Intercellular Calcium Waves in Drosophila Wing Discs. Biophysical journal\| PubMed ID: 28746859	2017
Whole blood clot optical clearing for nondestructive 3D imaging and quantitative analysis. Biomedical optics express\| PubMed ID: 28856043	2017
Reverse-engineering organogenesis through feedback loops between model systems. Current opinion in biotechnology\| PubMed ID: 29275226	2018
Preclinical study of a Kv11.1 potassium channel activator as antineoplastic approach for breast cancer. Oncotarget\| PubMed ID: 29423049	2018
Calcium as a signal integrator in developing epithelial tissues. Physical biology\| PubMed ID: 29611534	2018
Decoding Calcium Signaling Dynamics during Drosophila Wing Disc Development. Biophysical journal\| PubMed ID: 30704858	2019
Tools to reverse-engineer multicellular systems: case studies using the fruit fly. Journal of biological engineering\| PubMed ID: 31049075	2019
Microfluidics on the fly: Inexpensive rapid fabrication of thermally laminated microfluidic devices for live imaging and multimodal perturbations of multicellular systems. Biomicrofluidics\| PubMed ID: 31065310	2019
Rab11b-mediated integrin recycling promotes brain metastatic adaptation and outgrowth. Nature communications\| PubMed ID: 32541798	2020
A NEW REGISTRATION APPROACH FOR DYNAMIC ANALYSIS OF CALCIUM SIGNALS IN ORGANS. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 32699575	2018
Epithelial organ shape is generated by patterned actomyosin contractility and maintained by the extracellular matrix. PLoS computational biology\| PubMed ID: 32817654	2020
Pinching and pushing: fold formation in the Drosophila dorsal epidermis. Biophysical journal\| PubMed ID: 34461105	2021
From spikes to intercellular waves: Tuning intercellular calcium signaling dynamics modulates organ size control. PLoS computational biology\| PubMed ID: 34723960	2021
MAPPER: An Open-Source, High-Dimensional Image Analysis Pipeline Unmasks Differential Regulation of Wing Features. Frontiers in genetics\| PubMed ID: 35480325	2022
Quantitative insights in tissue growth and morphogenesis with optogenetics. Physical biology\| PubMed ID: 37678266	2023
Balancing competing effects of tissue growth and cytoskeletal regulation during Drosophila wing disc development. Nature communications\| PubMed ID: 38509115	2024
Reverse engineering morphogenesis through Bayesian optimization of physics-based models. NPJ systems biology and applications\| PubMed ID: 38714708	2024
Proteins clump: Mechanics and transport during neurodegeneration. Biophysical journal\| PubMed ID: 38901429	2024
Piezo regulates epithelial topology and promotes precision in organ size control. Cell reports\| PubMed ID: 38935502	2024
Mechanical Compression of Drosophila Embryos Using Rapid Fabrication Microfluidic Devices. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 39008180	2024