Davey M. Smith

Fatal Saccharomyces cerevisiae aortic graft infection.

Clade B HIV-1 superinfection with wild-type virus after primary infection with drug-resistant clade B virus.

HIV drug resistance acquired through superinfection.

Genetic attributes of cerebrospinal fluid-derived HIV-1 env.

Lack of neutralizing antibody response to HIV-1 predisposes to superinfection.

Characteristics of recently HIV-infected men who use the Internet to find male sex partners and sexual practices with those partners.

Serosorting can potentially increase HIV transmissions.

Physicians' attitudes toward homosexuality and HIV: survey of a California Medical Society- revisited (PATHH-II).

Comparison of algorithms that interpret genotypic HIV-1 drug resistance to determine the prevalence of transmitted drug resistance.

Active duty military personnel presenting for care at a Gay Men's Health Clinic.

A public health model for the molecular surveillance of HIV transmission in San Diego, California.

Pleocytosis is associated with disruption of HIV compartmentalization between blood and cerebral spinal fluid viral populations.

Are all subtypes created equal? The effectiveness of antiretroviral therapy against non-subtype B HIV-1.

A novel codon insert in protease of clade B HIV type 1.

The use of pooled viral load testing to identify antiretroviral treatment failure.

Select resistance-associated mutations in blood are associated with lower CSF viral loads and better neuropsychological performance.

Pooled nucleic acid testing to identify antiretroviral treatment failure during HIV infection.

Mitochondrial injury and cognitive function in HIV infection and methamphetamine use.

Malaria diagnosis by a polymerase chain reaction-based assay using a pooling strategy.

Gene expression before HAART initiation predicts HIV-infected individuals at risk of poor CD4+ T-cell recovery.

Protease polymorphisms in HIV-1 subtype CRF01_AE represent selection by antiretroviral therapy and host immune pressure.

Evaluation of an HIV nucleic acid testing program with automated Internet and voicemail systems to deliver results.

The relatedness of HIV epidemics in the United States-Mexico border region.

Evaluation of pooled rapid HIV antibody screening of patients admitted to a San Diego Hospital.

Detection of minority resistance during early HIV-1 infection: natural variation and spurious detection rather than transmission and evolution of multiple viral variants.

HIV-1 reverse transcriptase nucleotide substitutions in subtype C-infected, drug-naive, and treatment-experienced patients in South India.

Clinical, virologic, and immunologic correlates of HIV-1 intraclade B dual infection among men who have sex with men.

The price of tenofovir-emtricitabine undermines the cost-effectiveness and advancement of pre-exposure prophylaxis.

Reverse transcriptase substitution at codons 208 and 228 among treatment-experienced HIV-1 subtype-C-infected Indian patients is strongly associated with thymidine analogue mutations.

Genetic features of cerebrospinal fluid-derived subtype B HIV-1 tat.

A combined screening platform for HIV treatment failure and resistance.

Herpes viruses and HIV-1 drug resistance mutations influence the virologic and immunologic milieu of the male genital tract.

Correlates of HIV and malaria co-infection in Southern India.

Impact of seminal cytomegalovirus replication on HIV-1 dynamics between blood and semen.

Higher HIV-1 genetic diversity is associated with AIDS and neuropsychological impairment.

Sexual transmission of predicted CXCR4-tropic HIV-1 likely originating from the source partner's seminal cells.

Role of seminal shedding of herpesviruses in HIV Type 1 Transmission.

Cytomegalovirus DNA in semen and blood is associated with higher levels of proviral HIV DNA.

Enhanced CD4+ T-cell recovery with earlier HIV-1 antiretroviral therapy.

Etravirine in CSF is highly protein bound.

Using ultradeep pyrosequencing to study HIV-1 coreceptor usage in primary and dual infection.

Reply to Mounzer and DiNubile.

High prevalence of hepatitis delta virus among patients with chronic hepatitis B virus infection and HIV-1 in an intermediate hepatitis B virus endemic region.

HIV-1 clade B pol evolution following primary infection.

Simulation of pooled nucleic acid testing to identify antiretroviral treatment failure during HIV infection in Seoul, South Korea.

Virologic correlates of anti-CMV IgG levels in HIV-1-infected men.

Dual-mixed HIV-1 coreceptor tropism and HIV-associated neurocognitive deficits.

Antibody response to Achromobacter xylosoxidans during HIV infection is associated with lower CD4 levels and increased lymphocyte activation.

Gut Lactobacillales are associated with higher CD4 and less microbial translocation during HIV infection.

Pooled nucleic acid testing to identify antiretroviral treatment failure during HIV infection in Seoul, South Korea.

Incidence and prevalence of intrasubtype HIV-1 dual infection in at-risk men in the United States.

Predictors of virologic response in persons who start antiretroviral therapy during recent HIV infection.

The Use of High Performance Liquid Chromatography to Speciate and Characterize the Epidemiology of Mycobacteria.

HIV-associated neurocognitive disorder in HIV-infected Koreans: the Korean NeuroAIDS Project.

Mathematical modeling of HIV prevention measures including pre-exposure prophylaxis on HIV incidence in South Korea.

Short communication: prospective comparison of qualitative versus quantitative polymerase chain reaction for monitoring virologic treatment failure in HIV-infected patients.

Pre-exposure prophylaxis accessibility research and evaluation (PrEPARE Study).

IDEPI: rapid prediction of HIV-1 antibody epitopes and other phenotypic features from sequence data using a flexible machine learning platform.

HIV-1 neutralizing antibody response and viral genetic diversity characterized with next generation sequencing.

Next generation sequencing improves detection of drug resistance mutations in infants after PMTCT failure.

Gene-wide identification of episodic selection.

The Sordid Affair Between Human Herpesvirus and HIV.

Short Communication: Increase of HIV-1 K103N Transmitted Drug Resistance and Its Association with Efavirenz Use in South Korea.

Geographic and Temporal Trends in the Molecular Epidemiology and Genetic Mechanisms of Transmitted HIV-1 Drug Resistance: An Individual-Patient- and Sequence-Level Meta-Analysis.

Targeting HIV Prevention Based on Molecular Epidemiology Among Deeply Sampled Subnetworks of Men Who Have Sex With Men.

Seminal Shedding of CMV and HIV Transmission among Men Who Have Sex with Men.

Methamphetamine Use in HIV-infected Individuals Affects T-cell Function and Viral Outcome during Suppressive Antiretroviral Therapy.

Subtype associations with HIV-associated neurocognitive disorder in China.

HIV migration between blood plasma and cellular subsets before and after HIV therapy.

Cell-free mitochondrial DNA in CSF is associated with early viral rebound, inflammation, and severity of neurocognitive deficits in HIV infection.

What Can We Learn From Measles? No New HIV Infections.

Clear Links Between Starting Methamphetamine and Increasing Sexual Risk Behavior: A Cohort Study Among Men Who Have Sex With Men.

No evidence of posttreatment control after early initiation of antiretroviral therapy.

Circulating HIV DNA Correlates With Neurocognitive Impairment in Older HIV-infected Adults on Suppressive ART.

HIV Transmission Networks in the San Diego-Tijuana Border Region.

Timing Matters - Influenza Vaccination to HIV-Infected Patients.

Signs or Symptoms of Acute HIV Infection in a Cohort Undergoing Community-Based Screening.

Molecular epidemiology identifies HIV transmission networks associated with younger age and heterosexual exposure among Korean individuals.

Characteristics of Resting-State Functional Connectivity in HIV-Associated Neurocognitive Disorder.

A practical online tool to estimate antiretroviral coverage for HIV infected and susceptible populations needed to reduce local HIV epidemics.

The dynamics of the HIV epidemic among men who have sex with men (MSM) from 2005 to 2012 in Shenzhen, China.

First Appearance of HIV-1 CRF07_BC and CRF08_BC Outside China.

Antiretroviral Drugs for Treatment and Prevention of HIV Infection in Adults: 2016 Recommendations of the International Antiviral Society-USA Panel.

Standard vaccines increase HIV-1 transcription during antiretroviral therapy.

Screening for acute HIV infection in community-based settings: Cost-effectiveness and impact on transmissions.

HIV-associated neurocognitive disorder is associated with HIV-1 dual infection.

Can research at the end of life be a useful tool to advance HIV cure?

Partner services in adults with acute and early HIV infection.

Early Antiretroviral Therapy Is Associated with Lower HIV DNA Molecular Diversity and Lower Inflammation in Cerebrospinal Fluid but Does Not Prevent the Establishment of Compartmentalized HIV DNA Populations.

Social and Genetic Networks of HIV-1 Transmission in New York City.

Increased HIV-1 superinfection risk in carriers of specific human leukocyte antigen alleles.

Intrasubtype B HIV-1 Superinfection Correlates with Delayed Neutralizing Antibody Response.

No Substantial Evidence for Sexual Transmission of Minority HIV Drug Resistance Mutations in Men Who Have Sex with Men.

Size, Composition, and Evolution of HIV DNA Populations during Early Antiretroviral Therapy and Intensification with Maraviroc.

HIV, Hepatitis B Virus, and Hepatitis C Virus Prevalence Among High-Risk Populations in South India.

Temporal variation in HIV-specific IgG subclass antibodies during acute infection differentiates spontaneous controllers from chronic progressors.

Occult HBV infection in HIV-infected adults and evaluation of pooled NAT for HBV.

Antiretroviral Drugs for Treatment and Prevention of HIV Infection in Adults: 2018 Recommendations of the International Antiviral Society-USA Panel.

Challenges in Quantifying Cytosine Methylation in the HIV Provirus.

Mechanism of Action of Methotrexate Against Zika Virus.

Primary Incidence of Hepatitis C Virus Infection Among HIV-Infected Men Who Have Sex With Men in San Diego, 2000-2015.

Proliferative memory SAMHD1low CD4+ T cells harbour high levels of HIV-1 with compartmentalized viral populations.

Bacteremia and Skin Infections in Four Patients Caused by -Like Organisms.

Grindr Users Take More Risks, but Are More Open to Human Immunodeficiency Virus (HIV) Pre-exposure Prophylaxis: Could This Dating App Provide a Platform for HIV Prevention Outreach?

HIV persists throughout deep tissues with repopulation from multiple anatomical sources.

Perceptions of Next-of-Kin/Loved Ones About Last Gift Rapid Research Autopsy Study Enrolling People with HIV/AIDS at the End of Life: A Qualitative Interview Study.

"My Death Will Not [Be] in Vain": Testimonials from Last Gift Rapid Research Autopsy Study Participants Living with HIV at the End of Life.

Do Sexual Minorities Face Greater Risk for Sexual Harassment, Ever and at School, in Adolescence?: Findings From a 2019 Cross-Sectional Study of U.S. Adults.

No Evidence of SARS-CoV-2 Seminal Shedding Despite SARS-CoV-2 Persistence in the Upper Respiratory Tract.

Cost-effectiveness analysis of pre-exposure prophylaxis for the prevention of HIV in men who have sex with men in South Korea: a mathematical modelling study.

Comparative Circulation Dynamics of the Five Main HIV Types in China.

What the HIV Pandemic Experience Can Teach the United States About the COVID-19 Response.

Dynamics and Dispersal of Local HIV Epidemics Within San Diego and Across The San Diego-Tijuana Border.

High Prevalence of HIV-1 Drug Resistance and Dynamics of Transmission Among High-Risk Populations in Port-au-Prince, Haiti.

Effective HIV Molecular Surveillance Requires Identification of Incident Cases of Infection.

RAMIC: Design of a randomized, double-blind, placebo-controlled trial to evaluate the efficacy of ramipril in patients with COVID-19.

Monitoring HIV testing and pre-exposure prophylaxis information seeking by combining digital and traditional data.