Plant Molecular and Cellular Biology Program,
Department of Biology,
Interdisciplinary Center for Biotechnology Research,
Genetics Institute
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Composition and content of glucosinolates in developing Arabidopsis thaliana.
Planta Feb, 2002 | Pubmed ID: 11925040
CYP79F1 and CYP79F2 have distinct functions in the biosynthesis of aliphatic glucosinolates in Arabidopsis.
The Plant journal : for cell and molecular biology Mar, 2003 | Pubmed ID: 12609033
Transcriptome analysis of root transporters reveals participation of multiple gene families in the response to cation stress.
The Plant journal : for cell and molecular biology Sep, 2003 | Pubmed ID: 12969422
Arabidopsis thaliana glutamate-cysteine ligase: functional properties, kinetic mechanism, and regulation of activity.
The Journal of biological chemistry Aug, 2004 | Pubmed ID: 15180996
Rapid protein identification using direct infusion nanoelectrospray ionization mass spectrometry.
Proteomics Jan, 2006 | Pubmed ID: 16294305
Cell wall proteome in the maize primary root elongation zone. I. Extraction and identification of water-soluble and lightly ionically bound proteins.
Plant physiology Jan, 2006 | Pubmed ID: 16377746
The cassava (Manihot esculenta Crantz) root proteome: protein identification and differential expression.
Proteomics Mar, 2006 | Pubmed ID: 16421938
Characterization of the maize xylem sap proteome.
Journal of proteome research Apr, 2006 | Pubmed ID: 16602704
Additional freeze hardiness in wheat acquired by exposure to -3 degreesC is associated with extensive physiological, morphological, and molecular changes.
Journal of experimental botany , 2006 | Pubmed ID: 16968883
Advances in plant proteomics.
Proteomics Oct, 2006 | Pubmed ID: 16972296
Functional characterization of AtATM1, AtATM2, and AtATM3, a subfamily of Arabidopsis half-molecule ATP-binding cassette transporters implicated in iron homeostasis.
The Journal of biological chemistry Jul, 2007 | Pubmed ID: 17517886
Analysis of the vacuolar luminal proteome of Saccharomyces cerevisiae.
The FEBS journal Aug, 2007 | Pubmed ID: 17651441
Regulation of plant glucosinolate metabolism.
Planta Nov, 2007 | Pubmed ID: 17899172
Cell wall proteome in the maize primary root elongation zone. II. Region-specific changes in water soluble and lightly ionically bound proteins under water deficit.
Plant physiology Dec, 2007 | Pubmed ID: 17951457
Proteomics of pollen development and germination.
Journal of proteome research Dec, 2007 | Pubmed ID: 17958392
Comparative investigations of the glucosinolate-myrosinase system in Arabidopsis suspension cells and hypocotyls.
Plant & cell physiology Mar, 2008 | Pubmed ID: 18202003
Determination of in vivo disulfide-bonded proteins in Arabidopsis.
Journal of chromatography. B, Analytical technologies in the biomedical and life sciences Jan, 2009 | Pubmed ID: 19058769
Functional differentiation of Brassica napus guard cells and mesophyll cells revealed by comparative proteomics.
Molecular & cellular proteomics : MCP Apr, 2009 | Pubmed ID: 19106087
Plant Vacuolar ATP-binding Cassette Transporters That Translocate Folates and Antifolates in Vitro and Contribute to Antifolate Tolerance in Vivo.
The Journal of biological chemistry Mar, 2009 | Pubmed ID: 19136566
Characterization of glucosinolate--myrosinase system in developing salt cress Thellungiella halophila.
Physiologia plantarum May, 2009 | Pubmed ID: 19508363
Proteomics of Arabidopsis redox proteins in response to methyl jasmonate.
Journal of proteomics Nov, 2009 | Pubmed ID: 19628057
A redox-active isopropylmalate dehydrogenase functions in the biosynthesis of glucosinolates and leucine in Arabidopsis.
The Plant journal : for cell and molecular biology Nov, 2009 | Pubmed ID: 19674406
Comparative interactomics: analysis of arabidopsis 14-3-3 complexes reveals highly conserved 14-3-3 interactions between humans and plants.
Journal of proteome research Apr, 2009 | Pubmed ID: 19714877
Nuclear localization of NPR1 is required for regulation of salicylate tolerance, isochorismate synthase 1 expression and salicylate accumulation in Arabidopsis.
Journal of plant physiology Jan, 2010 | Pubmed ID: 19716624
Proteomic analysis of sugar beet apomictic monosomic addition line M14.
Journal of proteomics Dec, 2009 | Pubmed ID: 19782777
Analysis of abscisic acid responsive proteins in Brassica napus guard cells by multiplexed isobaric tagging.
Journal of proteomics Feb, 2010 | Pubmed ID: 19913118
Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii.
Nature Jan, 2010 | Pubmed ID: 20054389
Comparative proteomics of salt tolerance in Arabidopsis thaliana and Thellungiella halophila.
Journal of proteome research May, 2010 | Pubmed ID: 20377188
Functional specification of Arabidopsis isopropylmalate isomerases in glucosinolate and leucine biosynthesis.
Plant & cell physiology Sep, 2010 | Pubmed ID: 20663849
Functional characterization of Arabidopsis thaliana isopropylmalate dehydrogenases reveals their important roles in gametophyte development.
The New phytologist Jan, 2011 | Pubmed ID: 20840499
Desiccation tolerance mechanism in resurrection fern-ally Selaginella tamariscina revealed by physiological and proteomic analysis.
Journal of proteome research Dec, 2010 | Pubmed ID: 20923197
Isobaric tags for relative and absolute quantification- based comparative proteomics reveals the features of plasma membrane-associated proteomes of pollen grains and pollen tubes from Lilium davidii.
Journal of integrative plant biology Dec, 2010 | Pubmed ID: 21106004
Proteomic analysis of circulating immune complexes in juvenile idiopathic arthritis reveals disease-associated proteins.
Proteomics. Clinical applications Jul, 2009 | Pubmed ID: 21136990
Bioinformatic analysis of molecular network of glucosinolate biosynthesis.
Computational biology and chemistry Feb, 2011 | Pubmed ID: 21247808
Exoproteome of Staphylococcus aureus reveals putative determinants of nasal carriage.
Journal of proteome research Apr, 2011 | Pubmed ID: 21338050
Proteomic identification of differentially expressed proteins in Arabidopsis in response to methyl jasmonate.
Journal of plant physiology Jul, 2011 | Pubmed ID: 21377756
TILLING for allergen reduction and improvement of quality traits in peanut (Arachis hypogaea L.).
BMC plant biology , 2011 | Pubmed ID: 21569438
Developing a new interdisciplinary lab course for undergraduate and graduate students: Plant cells and proteins.
Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology Nov, 2007 | Pubmed ID: 21591136
Structural and functional evolution of isopropylmalate dehydrogenases in the leucine and glucosinolate pathways of Arabidopsis thaliana.
The Journal of biological chemistry Aug, 2011 | Pubmed ID: 21697089
Physiological and proteomic analysis of salinity tolerance in Puccinellia tenuiflora.
Journal of proteome research Sep, 2011 | Pubmed ID: 21732589
Identification of a sugar beet BvM14-MADS box gene through differential gene expression analysis of monosomic addition line M14.
Journal of plant physiology Nov, 2011 | Pubmed ID: 21807438
Mechanisms of plant salt response: insights from proteomics.
Journal of proteome research Jan, 2012 | Pubmed ID: 22017755
Boosting the globalization of plant proteomics through INPPO: current developments and future prospects.
Proteomics Feb, 2012 | Pubmed ID: 22290804
Proteomics and metabolomics of Arabidopsis responses to perturbation of glucosinolate biosynthesis.
Molecular plant Sep, 2012 | Pubmed ID: 22498773
The β-subunit of the SnRK1 complex is phosphorylated by the plant cell death suppressor Adi3.
Plant physiology Jul, 2012 | Pubmed ID: 22573803
Methyl jasmonate responsive proteins in Brassica napus guard cells revealed by iTRAQ-based quantitative proteomics.
Journal of proteome research Jul, 2012 | Pubmed ID: 22639841
Comparative proteomics of the recently and recurrently formed natural allopolyploid Tragopogon mirus (Asteraceae) and its parents.
The New phytologist Oct, 2012 | Pubmed ID: 22861377
Archaeal JAB1/MPN/MOV34 metalloenzyme (HvJAMM1) cleaves ubiquitin-like small archaeal modifier proteins (SAMPs) from protein-conjugates.
Molecular microbiology Nov, 2012 | Pubmed ID: 22970855
Single-cell-type proteomics: toward a holistic understanding of plant function.
Molecular & cellular proteomics : MCP Dec, 2012 | Pubmed ID: 22982375
Treatment with the proteasome inhibitor MG132 during the end of oocyte maturation improves oocyte competence for development after fertilization in cattle.
PloS one , 2012 | Pubmed ID: 23144909
Bifurcation of Arabidopsis NLR immune signaling via Ca²⁺-dependent protein kinases.
PLoS pathogens Jan, 2013 | Pubmed ID: 23382673
Two Pdk1 phosphorylation sites on the plant cell death suppressor Adi3 contribute to substrate phosphorylation.
Biochimica et biophysica acta Jun, 2013 | Pubmed ID: 23507047
Quantitative proteomics of tomato defense against Pseudomonas syringae infection.
Proteomics Jun, 2013 | Pubmed ID: 23533086
Integrated proteomics and metabolomics of Arabidopsis acclimation to gene-dosage dependent perturbation of isopropylmalate dehydrogenases.
PloS one , 2013 | Pubmed ID: 23533573
C4 photosynthetic machinery: insights from maize chloroplast proteomics.
Frontiers in plant science , 2013 | Pubmed ID: 23596450
Proteomic comparison of basal endosperm in maize miniature1 mutant and its wild-type Mn1.
Frontiers in plant science , 2013 | Pubmed ID: 23805148
Pilot study using proteomics to identify predictive biomarkers of necrotizing enterocolitis from buccal swabs in very low birth weight infants.
Neonatology , 2013 | Pubmed ID: 24030199
Abscisic acid-responsive guard cell metabolomes of Arabidopsis wild-type and gpa1 G-protein mutants.
The Plant cell Dec, 2013 | Pubmed ID: 24368793
Tyrosine phosphorylation of protein kinase complex BAK1/BIK1 mediates Arabidopsis innate immunity.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2014 | Pubmed ID: 24532660
Thiol-based redox proteins in abscisic acid and methyl jasmonate signaling in Brassica napus guard cells.
The Plant journal : for cell and molecular biology May, 2014 | Pubmed ID: 24580573
A comparative glycoproteome study of developing endosperm in the hexose-deficient miniature1 (mn1) seed mutant and its wild type Mn1 in maize.
Frontiers in plant science , 2014 | Pubmed ID: 24616729
Plant single-cell and single-cell-type metabolomics.
Trends in plant science Oct, 2014 | Pubmed ID: 24946988
Molecular reprogramming of Arabidopsis in response to perturbation of jasmonate signaling.
Journal of proteome research Dec, 2014 | Pubmed ID: 25311705
cysTMTRAQ-An integrative method for unbiased thiol-based redox proteomics.
Molecular & cellular proteomics : MCP Jan, 2015 | Pubmed ID: 25316711
Protein profiles reveal diverse responsive signaling pathways in kernels of two maize inbred lines with contrasting drought sensitivity.
International journal of molecular sciences Oct, 2014 | Pubmed ID: 25334062
Dihydroxyacid dehydratase is important for gametophyte development and disruption causes increased susceptibility to salinity stress in Arabidopsis.
Journal of experimental botany Feb, 2015 | Pubmed ID: 25399005
Identification of regulatory factors for mesenchymal stem cell-derived salivary epithelial cells in a co-culture system.
PloS one , 2014 | Pubmed ID: 25402494
Distinct patterns of the histone marks associated with recruitment of the methionine chain-elongation pathway from leucine biosynthesis.
Journal of experimental botany Feb, 2015 | Pubmed ID: 25428994
Recent advances and challenges in plant phosphoproteomics.
Proteomics Mar, 2015 | Pubmed ID: 25429768
Oxidation and phosphorylation of MAP kinase 4 cause protein aggregation.
Biochimica et biophysica acta Feb, 2015 | Pubmed ID: 25433264
Modulation of RNA polymerase II phosphorylation downstream of pathogen perception orchestrates plant immunity.
Cell host & microbe Dec, 2014 | Pubmed ID: 25464831
Protein phosphorylation in stomatal movement.
Plant signaling & behavior , 2014 | Pubmed ID: 25482764
Gene-expression novelty in allopolyploid cotton: a proteomic perspective.
Genetics May, 2015 | Pubmed ID: 25735302
HIV-Enhancing Factors Are Secreted by Reproductive Epithelia upon Inoculation with Bacterial Vaginosis-Associated Bacteria.
Protein and peptide letters , 2015 | Pubmed ID: 25751267
Gold nanoparticle-enabled blood test for early stage cancer detection and risk assessment.
ACS applied materials & interfaces Apr, 2015 | Pubmed ID: 25757512
Phosphorylation of trihelix transcriptional repressor ASR3 by MAP KINASE4 negatively regulates Arabidopsis immunity.
The Plant cell Mar, 2015 | Pubmed ID: 25770109
Salt stress response of membrane proteome of sugar beet monosomic addition line M14.
Journal of proteomics Sep, 2015 | Pubmed ID: 25845583
Proteomics of methyl jasmonate induced defense response in maize leaves against Asian corn borer.
BMC genomics , 2015 | Pubmed ID: 25885025
Adaptive Engineering of Phytochelatin-based Heavy Metal Tolerance.
The Journal of biological chemistry Jul, 2015 | Pubmed ID: 26018077
The guard cell metabolome: functions in stomatal movement and global food security.
Frontiers in plant science , 2015 | Pubmed ID: 26042131
Cytological and Proteomic Analyses of Osmunda cinnamomea Germinating Spores Reveal Characteristics of Fern Spore Germination and Rhizoid Tip Growth.
Molecular & cellular proteomics : MCP Sep, 2015 | Pubmed ID: 26091698
Phosphoproteomics technologies and applications in plant biology research.
Frontiers in plant science , 2015 | Pubmed ID: 26136758
Cytological and proteomic analyses of horsetail (Equisetum arvense L.) spore germination.
Frontiers in plant science , 2015 | Pubmed ID: 26136760
Redox proteomics of tomato in response to Pseudomonas syringae infection.
Horticulture research , 2015 | Pubmed ID: 26504582
Environment-Living Organism's Interactions from Physiology to Genomics.
International journal of genomics , 2015 | Pubmed ID: 26526445
Preparation of Epidermal Peels and Guard Cell Protoplasts for Cellular, Electrophysiological, and -Omics Assays of Guard Cell Function.
Methods in molecular biology (Clifton, N.J.) , 2016 | Pubmed ID: 26577784
Metabolomic Responses of Guard Cells and Mesophyll Cells to Bicarbonate.
PloS one , 2015 | Pubmed ID: 26641455
Protein-protein interactions in plant mitogen-activated protein kinase cascades.
Journal of experimental botany Feb, 2016 | Pubmed ID: 26646897
Identification of thioredoxin targets in guard cell enriched epidermal peels using cysTMT proteomics.
Journal of proteomics Feb, 2016 | Pubmed ID: 26691838
Proteome targets of ubiquitin-like samp1ylation are associated with sulfur metabolism and oxidative stress in Haloferax volcanii.
Proteomics Apr, 2016 | Pubmed ID: 26841191
Genome-wide identification and homeolog-specific expression analysis of the SnRK2 genes in Brassica napus guard cells.
Plant molecular biology May, 2016 | Pubmed ID: 26898295
Protein Phosphorylation and Redox Modification in Stomatal Guard Cells.
Frontiers in physiology , 2016 | Pubmed ID: 26903877
Editorial: Plant Single Cell Type Systems Biology.
Frontiers in plant science , 2016 | Pubmed ID: 26904034
New nodes and edges in the glucosinolate molecular network revealed by proteomics and metabolomics of Arabidopsis myb28/29 and cyp79B2/B3 glucosinolate mutants.
Journal of proteomics Apr, 2016 | Pubmed ID: 26915584
Nitrogen starvation-induced accumulation of triacylglycerol in the green algae: evidence for a role for ROC40, a transcription factor involved in circadian rhythm.
The Plant journal : for cell and molecular biology Mar, 2016 | Pubmed ID: 26920093
Polyploidy and the proteome.
Biochimica et biophysica acta Aug, 2016 | Pubmed ID: 26993527
Proteomic Analysis Reveals the Leaf Color Regulation Mechanism in Chimera Hosta "Gold Standard" Leaves.
International journal of molecular sciences Mar, 2016 | Pubmed ID: 27005614
Chilling-responsive mechanisms in halophyte Puccinellia tenuiflora seedlings revealed from proteomics analysis.
Journal of proteomics 06, 2016 | Pubmed ID: 27130536
Proteomic Insight into the Response of Arabidopsis Chloroplasts to Darkness.
PloS one , 2016 | Pubmed ID: 27137770
Ubiquitin-Like Proteasome System Represents a Eukaryotic-Like Pathway for Targeted Proteolysis in Archaea.
mBio 05, 2016 | Pubmed ID: 27190215
Quantitative proteomics and phosphoproteomics of sugar beet monosomic addition line M14 in response to salt stress.
Journal of proteomics 06, 2016 | Pubmed ID: 27233743
Critical Role of COI1-Dependent Jasmonate Pathway in AAL toxin induced PCD in Tomato Revealed by Comparative Proteomics.
Scientific reports 06, 2016 | Pubmed ID: 27324416
CUB domain-containing protein 1 and the epidermal growth factor receptor cooperate to induce cell detachment.
Breast cancer research : BCR 08, 2016 | Pubmed ID: 27495374
Jasmonate-mediated stomatal closure under elevated CO revealed by time-resolved metabolomics.
The Plant journal : for cell and molecular biology Dec, 2016 | Pubmed ID: 27500669
Erratum for Fu et al., Ubiquitin-Like Proteasome System Represents a Eukaryotic-Like Pathway for Targeted Proteolysis in Archaea.
mBio 08, 2016 | Pubmed ID: 27507826
Na2CO3-responsive mechanisms in halophyte Puccinellia tenuiflora roots revealed by physiological and proteomic analyses.
Scientific reports 09, 2016 | Pubmed ID: 27596441
Regulation of BZR1 in fruit ripening revealed by iTRAQ proteomics analysis.
Scientific reports Sep, 2016 | Pubmed ID: 27680870
Metabolomic Responses of Arabidopsis Suspension Cells to Bicarbonate under Light and Dark Conditions.
Scientific reports 10, 2016 | Pubmed ID: 27762345
PARylation of the forkhead-associated domain protein DAWDLE regulates plant immunity.
EMBO reports 12, 2016 | Pubmed ID: 27797852
Bicarbonate Induced Redox Proteome Changes in Arabidopsis Suspension Cells.
Frontiers in plant science , 2017 | Pubmed ID: 28184230
Identification of MAPK Substrates Using Quantitative Phosphoproteomics.
Methods in molecular biology (Clifton, N.J.) , 2017 | Pubmed ID: 28220420
Overexpression of S-Adenosyl-l-Methionine Synthetase 2 from Sugar Beet M14 Increased Arabidopsis Tolerance to Salt and Oxidative Stress.
International journal of molecular sciences Apr, 2017 | Pubmed ID: 28420190
Salinity Response in Chloroplasts: Insights from Gene Characterization.
International journal of molecular sciences May, 2017 | Pubmed ID: 28481319
Redox regulation of a guard cell SNF1-related protein kinase in , an oilseed crop.
The Biochemical journal 07, 2017 | Pubmed ID: 28642254
Metabolomics and Proteomics of Guard Cells in Response to Low CO.
Frontiers in molecular biosciences , 2017 | Pubmed ID: 28791296
Hydrogen Peroxide Response in Leaves of Poplar (Populus simonii × Populus nigra) Revealed from Physiological and Proteomic Analyses.
International journal of molecular sciences Oct, 2017 | Pubmed ID: 28974034
Multiplex quantitative SILAC for analysis of archaeal proteomes: a case study of oxidative stress responses.
Environmental microbiology Jan, 2018 | Pubmed ID: 29194950
An Erwinia amylovora yjeK mutant exhibits reduced virulence, increased chemical sensitivity and numerous environmentally dependent proteomic alterations.
Molecular plant pathology Jul, 2018 | Pubmed ID: 29232043
Quantitative proteomics reveals a role of JAZ7 in plant defense response to Pseudomonas syringae DC3000.
Journal of proteomics Mar, 2018 | Pubmed ID: 29325990
A Phosphorylation Switch on Lon Protease Regulates Bacterial Type III Secretion System in Host.
mBio Jan, 2018 | Pubmed ID: 29362236
Deciphering drought-induced metabolic responses and regulation in developing maize kernels.
Plant biotechnology journal Feb, 2018 | Pubmed ID: 29431900
Regulation of brassinosteroid receptor BRI1 endocytosis and degradation by plant U-box PUB12/PUB13-mediated ubiquitination.
Proceedings of the National Academy of Sciences of the United States of America Feb, 2018 | Pubmed ID: 29432171
Proteome analysis of Aspergillus flavus isolate-specific responses to oxidative stress in relationship to aflatoxin production capability.
Scientific reports Feb, 2018 | Pubmed ID: 29467403
Characterization of thiol-based redox modifications of SNF1-related protein kinase 2.6-2C.
FEBS open bio 04, 2018 | Pubmed ID: 29632815
Metabolomics of Early Stage Plant Cell-Microbe Interaction Using Stable Isotope Labeling.
Frontiers in plant science , 2018 | Pubmed ID: 29922325
1Plant Molecular and Cellular Biology Program, University of Florida,
2Department of Biology, University of Florida,
3Genetics Institute (UFGI), University of Florida,
4Alkali Soil Natural Environmental Science Center, Northeast Forestry University,
5Interdisciplinary Center for Biotechnology Research (ICBR), University of Florida
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