Alfonso Valencia

Towards the prediction of protein interaction partners using physical docking.

Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia.

Non-coding recurrent mutations in chronic lymphocytic leukaemia.

The BLUEPRINT Data Analysis Portal.

Cancer and central nervous system disorders: protocol for an umbrella review of systematic reviews and updated meta-analyses of observational studies.

Anna Tramontano 1957-2017.

Most Alternative Isoforms Are Not Functionally Important.

LimTox: a web tool for applied text mining of adverse event and toxicity associations of compounds, drugs and genes.

A molecular hypothesis to explain direct and inverse co-morbidities between Alzheimer's Disease, Glioblastoma and Lung cancer.

Anorexia nervosa and cancer: a protocol for a systematic review and meta-analysis of observational studies.

Risk of mortality among children, adolescents, and adults with autism spectrum disorder or attention deficit hyperactivity disorder and their first-degree relatives: a protocol for a systematic review and meta-analysis of observational studies.

Legacy data sharing to improve drug safety assessment: the eTOX project.

Epigenetic and Transcriptional Variability Shape Phenotypic Plasticity.

BIOLITMAP: a web-based geolocated, temporal and thematic visualization of the evolution of bioinformatics publications.

Intronic CNVs and gene expression variation in human populations.

Reviewer-coerced citation: case report, update on journal policy and suggestions for future prevention.

Big data analytics for personalized medicine.

Association of Anorexia Nervosa With Risk of Cancer: A Systematic Review and Meta-analysis.

Molecular Inverse Comorbidity between Alzheimer's Disease and Lung Cancer: New Insights from Matrix Factorization.

Patient Dossier: Healthcare queries over distributed resources.

On the inconsistent treatment of gene-protein-reaction rules in context-specific metabolic models.

Pathway and network analysis of more than 2500 whole cancer genomes.

Understanding oncogenicity of cancer driver genes and mutations in the cancer genomics era.

Unveiling new disease, pathway, and gene associations via multi-scale neural network.

COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms.

Interpreting molecular similarity between patients as a determinant of disease comorbidity relationships.

Sex and gender differences and biases in artificial intelligence for biomedicine and healthcare.

A user guide for the online exploration and visualization of PCAWG data.

Author Correction: COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms.

LifeTime and improving European healthcare through cell-based interceptive medicine.

Detection of SARS-CoV-2 in a cat owned by a COVID-19-affected patient in Spain.

Pigs are not susceptible to SARS-CoV-2 infection but are a model for viral immunogenicity studies.

ECCB2020: the 19th European Conference on Computational Biology.

Simulating SARS-CoV-2 epidemics by region-specific variables and modeling contact tracing app containment.

Unraveling the molecular basis of host cell receptor usage in SARS-CoV-2 and other human pathogenic β-CoVs.

SARS-CoV-2 infection elicits a rapid neutralizing antibody response that correlates with disease severity.

Artificial intelligence in cancer research: learning at different levels of data granularity.

Stable neutralizing antibody levels 6 months after mild and severe COVID-19 episodes.

Artificial Intelligence-Aided Precision Medicine for COVID-19: Strategic Areas of Research and Development.

Publisher Correction: LifeTime and improving European healthcare through cell-based interceptive medicine.

The eTRANSAFE Project on Translational Safety Assessment through Integrative Knowledge Management: Achievements and Perspectives.

Protection against reinfection with D614- or G614-SARS-CoV-2 isolates in golden Syrian hamster.

Identification of Plitidepsin as Potent Inhibitor of SARS-CoV-2-Induced Cytopathic Effect After a Drug Repurposing Screen.

The multilayer community structure of medulloblastoma.

Transcriptomic and Genetic Associations between Alzheimer's Disease, Parkinson's Disease, and Cancer.

The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for research.

Computational analysis of sense-antisense chimeric transcripts reveals their potential regulatory features and the landscape of expression in human cells.

Assessing the accuracy of contact and distance predictions in CASP14.

STAG2 loss-of-function affects short-range genomic contacts and modulates the basal-luminal transcriptional program of bladder cancer cells.

COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.

Perspectives on emerging technologies, personalised medicine, and clinical research for cancer control in Latin America and the Caribbean.

COVID-19 Flow-Maps an open geographic information system on COVID-19 and human mobility for Spain.

ExTRI: Extraction of transcription regulation interactions from literature.

GA4GH: International policies and standards for data sharing across genomic research and healthcare.

The structural coverage of the human proteome before and after AlphaFold.

Mortality in Persons With Autism Spectrum Disorder or Attention-Deficit/Hyperactivity Disorder: A Systematic Review and Meta-analysis.

Patient-specific Boolean models of signalling networks guide personalised treatments.

Clinical course impacts early kinetics,magnitude, and amplitude of SARS-CoV-2 neutralizing antibodies beyond 1 year after infection.

Optimizing Dosage-Specific Treatments in a Multi-Scale Model of a Tumor Growth.

Design and methodological characteristics of studies using observational routinely collected health data for investigating the link between cancer and neurodegenerative diseases: protocol for a meta-research study.

Detection of oncogenic and clinically actionable mutations in cancer genomes critically depends on variant calling tools.

Heterogeneous Infectivity and Pathogenesis of SARS-CoV-2 Variants Beta, Delta and Omicron in Transgenic K18-hACE2 and Wildtype Mice.

Evaluating the policy of closing bars and restaurants in Cataluña and its effects on mobility and COVID19 incidence.

Digital biomarkers and sex impacts in Alzheimer's disease management - potential utility for innovative 3P medicine approach.

Look-alike humans identified by facial recognition algorithms show genetic similarities.

ECCB2022: the 21st European Conference on Computational Biology.

A structural biology community assessment of AlphaFold2 applications.

3D chromatin connectivity underlies replication origin efficiency in mouse embryonic stem cells.

Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes.

Predicting the evolution of COVID-19 mortality risk: A Recurrent Neural Network approach.

Low input capture Hi-C (liCHi-C) identifies promoter-enhancer interactions at high-resolution.

Analysis of electronic health records from three distinct and large populations reveals high prevalence and biases in the co-administration of drugs known to interact.

Engaging European society at the forefront of cancer research and care.