Jen-Tsan Chi

Comprehensive analysis of the gene expression profiles in human gastric cancer cell lines.

Diversity, topographic differentiation, and positional memory in human fibroblasts.

Genomewide view of gene silencing by small interfering RNAs.

Endothelial cell diversity revealed by global expression profiling.

Systemic and cell type-specific gene expression patterns in scleroderma skin.

Gene expression signature of fibroblast serum response predicts human cancer progression: similarities between tumors and wounds.

Gene expression programs in response to hypoxia: cell type specificity and prognostic significance in human cancers.

Lysyl oxidase is essential for hypoxia-induced metastasis.

Predicting a local recurrence after breast-conserving therapy by gene expression profiling.

The potential role of intrinsic hypoxia markers as prognostic variables in cancer.

Gene expression programs of human smooth muscle cells: tissue-specific differentiation and prognostic significance in breast cancers.

A viral microRNA functions as an orthologue of cellular miR-155.

Modeling cancer progression via pathway dependencies.

The genomic analysis of erythrocyte microRNA expression in sickle cell diseases.

Combining biological gene expression signatures in predicting outcome in breast cancer: An alternative to supervised classification.

The genomic analysis of lactic acidosis and acidosis response in human cancers.

Cross-study projections of genomic biomarkers: an evaluation in cancer genomics.

Tumor vasculature is regulated by PHD2-mediated angiogenesis and bone marrow-derived cell recruitment.

Minimizing off-target effects by using diced siRNAs for RNA interference.

p38gamma mitogen-activated protein kinase is a key regulator in skeletal muscle metabolic adaptation in mice.

Pleiotrophin regulates the expansion and regeneration of hematopoietic stem cells.

microRNA miR-144 modulates oxidative stress tolerance and associates with anemia severity in sickle cell disease.

Latent factor analysis to discover pathway-associated putative segmental aneuploidies in human cancers.

Isolation and characterization of microRNAs of human mature erythrocytes.

Lactic acidosis triggers starvation response with paradoxical induction of TXNIP through MondoA.

AN INTEGRATIVE ANALYSIS OF CANCER GENE EXPRESSION STUDIES USING BAYESIAN LATENT FACTOR MODELING.

Comparison of genomics and functional imaging from canine sarcomas treated with thermoradiotherapy predicts therapeutic response and identifies combination therapeutics.

Polysome profiling of the malaria parasite Plasmodium falciparum.

Analysis of tumor environmental response and oncogenic pathway activation identifies distinct basal and luminal features in HER2-related breast tumor subtypes.

Whole blood gene expression analyses in patients with single versus recurrent venous thromboembolism.

Targeting GLUT1 and the Warburg effect in renal cell carcinoma by chemical synthetic lethality.

Glutamine synthetase is a genetic determinant of cell type-specific glutamine independence in breast epithelia.

Functional interaction between responses to lactic acidosis and hypoxia regulates genomic transcriptional outputs.

Time-dependent changes in non-COX-1-dependent platelet function with daily aspirin therapy.

A heterozygous IDH1R132H/WT mutation induces genome-wide alterations in DNA methylation.

Translocation of sickle cell erythrocyte microRNAs into Plasmodium falciparum inhibits parasite translation and contributes to malaria resistance.

Associations between Intake of Folate, Methionine, and Vitamins B-12, B-6 and Prostate Cancer Risk in American Veterans.

Global identification of MLL2-targeted loci reveals MLL2's role in diverse signaling pathways.

Iron-responsive miR-485-3p regulates cellular iron homeostasis by targeting ferroportin.

Acidosis activation of the proton-sensing GPR4 receptor stimulates vascular endothelial cell inflammatory responses revealed by transcriptome analysis.

Aspirin exposure reveals novel genes associated with platelet function and cardiovascular events.

Understanding the tumor microenvironment and radioresistance by combining functional imaging with global gene expression.

Catabolism of exogenous lactate reveals it as a legitimate metabolic substrate in breast cancer.

Alveolar rhabdomyosarcoma-associated PAX3-FOXO1 promotes tumorigenesis via Hippo pathway suppression.

Acidosis induces reprogramming of cellular metabolism to mitigate oxidative stress.

A joint analysis of metabolomics and genetics of breast cancer.

Glycolysis-dependent histone deacetylase 4 degradation regulates inflammatory cytokine production.

Utilization of the Eμ-Myc mouse to model heterogeneity of therapeutic response.

Syngeneic Murine Ovarian Cancer Model Reveals That Ascites Enriches for Ovarian Cancer Stem-Like Cells Expressing Membrane GRP78.

Whole blood gene expression profiles distinguish clinical phenotypes of venous thromboembolism.

Alternative fuels for cancer cells.

Comprehensive profiling of amino acid response uncovers unique methionine-deprived response dependent on intact creatine biosynthesis.

An unexpected alliance between stress responses to drive oncogenesis.

E2F1-Mediated Induction of NFYB Attenuates Apoptosis via Joint Regulation of a Pro-Survival Transcriptional Program.

Secreted Frizzled-Related Protein 3 (SFRP3) Is Required for Tumorigenesis of PAX3-FOXO1-Positive Alveolar Rhabdomyosarcoma.

Modulation of PICALM Levels Perturbs Cellular Cholesterol Homeostasis.

Preoperative Single-Fraction Partial Breast Radiation Therapy: A Novel Phase 1, Dose-Escalation Protocol With Radiation Response Biomarkers.

Suppression of PGC-1α Is Critical for Reprogramming Oxidative Metabolism in Renal Cell Carcinoma.

A paclitaxel-loaded recombinant polypeptide nanoparticle outperforms Abraxane in multiple murine cancer models.

Synthesis and Biological Evaluation of Manassantin Analogues for Hypoxia-Inducible Factor 1α Inhibition.

ACLY and ACC1 Regulate Hypoxia-Induced Apoptosis by Modulating ETV4 via α-ketoglutarate.

FAS Death Receptor: A Breast Cancer Subtype-Specific Radiation Response Biomarker and Potential Therapeutic Target.

A comprehensive joint analysis of the long and short RNA transcriptomes of human erythrocytes.