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What makes us human?
Genome biology , 2004 | Pubmed ID: 15287969
Improving genome annotations using phylogenetic profile anomaly detection.
Bioinformatics (Oxford, England) Feb, 2005 | Pubmed ID: 15374867
A human-specific gene in microglia.
Science (New York, N.Y.) Sep, 2005 | Pubmed ID: 16151003
DNA sequence and analysis of human chromosome 18.
Nature Sep, 2005 | Pubmed ID: 16177791
The case for selection at CCR5-Delta32.
PLoS biology Nov, 2005 | Pubmed ID: 16248677
Genome sequence, comparative analysis and haplotype structure of the domestic dog.
Nature Dec, 2005 | Pubmed ID: 16341006
DNA sequence and analysis of human chromosome 8.
Nature Jan, 2006 | Pubmed ID: 16421571
A bivalent chromatin structure marks key developmental genes in embryonic stem cells.
Cell Apr, 2006 | Pubmed ID: 16630819
System-wide genomic and biochemical comparisons of sialic acid biology among primates and rodents: Evidence for two modes of rapid evolution.
The Journal of biological chemistry Sep, 2006 | Pubmed ID: 16769723
A second fatty acid amide hydrolase with variable distribution among placental mammals.
The Journal of biological chemistry Dec, 2006 | Pubmed ID: 17015445
Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites.
Proceedings of the National Academy of Sciences of the United States of America Apr, 2007 | Pubmed ID: 17442748
Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences.
Nature May, 2007 | Pubmed ID: 17495919
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells.
Nature Aug, 2007 | Pubmed ID: 17603471
Dissecting direct reprogramming through integrative genomic analysis.
Nature Jul, 2008 | Pubmed ID: 18509334
Genome-scale DNA methylation maps of pluripotent and differentiated cells.
Nature Aug, 2008 | Pubmed ID: 18600261
Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains.
PLoS genetics Oct, 2008 | Pubmed ID: 18974828
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals.
Nature Mar, 2009 | Pubmed ID: 19182780
ZBED6, a novel transcription factor derived from a domesticated DNA transposon regulates IGF2 expression and muscle growth.
PLoS biology Dec, 2009 | Pubmed ID: 20016685
Genome-scale DNA methylation mapping of clinical samples at single-nucleotide resolution.
Nature methods Feb, 2010 | Pubmed ID: 20062050
Comparative epigenomic analysis of murine and human adipogenesis.
Cell Oct, 2010 | Pubmed ID: 20887899
The NIH Roadmap Epigenomics Mapping Consortium.
Nature biotechnology Oct, 2010 | Pubmed ID: 20944595
Mapping and analysis of chromatin state dynamics in nine human cell types.
Nature May, 2011 | Pubmed ID: 21441907
Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay.
Nature biotechnology Mar, 2012 | Pubmed ID: 22371084
A unique regulatory phase of DNA methylation in the early mammalian embryo.
Nature Apr, 2012 | Pubmed ID: 22456710
Integrative genomics identifies the corepressor SMRT as a gatekeeper of adipogenesis through the transcription factors C/EBPβ and KAISO.
Molecular cell May, 2012 | Pubmed ID: 22521691
Convergent and divergent evolution of genomic imprinting in the marsupial Monodelphis domestica.
BMC genomics , 2012 | Pubmed ID: 22899817
Genome-wide map of quantified epigenetic changes during in vitro chondrogenic differentiation of primary human mesenchymal stem cells.
BMC genomics , 2013 | Pubmed ID: 23414147
Systematic dissection of regulatory motifs in 2000 predicted human enhancers using a massively parallel reporter assay.
Genome research May, 2013 | Pubmed ID: 23512712
Cellular source and mechanisms of high transcriptome complexity in the mammalian testis.
Cell reports Jun, 2013 | Pubmed ID: 23791531
microRNA-140 targets RALA and regulates chondrogenic differentiation of human mesenchymal stem cells by translational enhancement of SOX9 and ACAN.
Stem cells and development Feb, 2014 | Pubmed ID: 24063364
Early B-cell factor-1 (EBF1) is a key regulator of metabolic and inflammatory signaling pathways in mature adipocytes.
The Journal of biological chemistry Dec, 2013 | Pubmed ID: 24174531
High-resolution mapping reveals a conserved, widespread, dynamic mRNA methylation program in yeast meiosis.
Cell Dec, 2013 | Pubmed ID: 24269006
Genome-scale CRISPR-Cas9 knockout screening in human cells.
Science (New York, N.Y.) Jan, 2014 | Pubmed ID: 24336571
Brief report: importance of SOX8 for in vitro chondrogenic differentiation of human mesenchymal stromal cells.
Stem cells (Dayton, Ohio) Jun, 2014 | Pubmed ID: 24449344
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells.
Nature biotechnology Apr, 2014 | Pubmed ID: 24658644
ZBED6 modulates the transcription of myogenic genes in mouse myoblast cells.
PloS one , 2014 | Pubmed ID: 24714595
Analysis of the effects of five factors relevant to in vitro chondrogenesis of human mesenchymal stem cells using factorial design and high throughput mRNA-profiling.
PloS one , 2014 | Pubmed ID: 24816923
The regulatory landscape of osteogenic differentiation.
Stem cells (Dayton, Ohio) Jun, 2014 | Pubmed ID: 24898411
Comprehensive mutational scanning of a kinase in vivo reveals substrate-dependent fitness landscapes.
Nucleic acids research Oct, 2014 | Pubmed ID: 24914046
Perturbation of m6A Writers Reveals Two Distinct Classes of mRNA Methylation at Internal and 5' Sites.
Cell reports Jul, 2014 | Pubmed ID: 24981863
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