Division of Biological Engineering,
Department of Civil and Environmental Engineering,
Division of Biological Engineering, Department of Civil and Environmental Engineering
Edward F. DeLong has not added Biography.
If you are Edward F. DeLong and would like to personalize this page please email our Author Liaison for assistance.
Comparative genomic analysis of archaeal genotypic variants in a single population and in two different oceanic provinces.
Applied and environmental microbiology Jan, 2002 | Pubmed ID: 11772643
Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea.
Applied and environmental microbiology Feb, 2002 | Pubmed ID: 11823205
Unsuspected diversity among marine aerobic anoxygenic phototrophs.
Nature Feb, 2002 | Pubmed ID: 11832943
Towards microbial systems science: integrating microbial perspective, from genomes to biomes.
Environmental microbiology Jan, 2002 | Pubmed ID: 11966814
Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments.
Proceedings of the National Academy of Sciences of the United States of America May, 2002 | Pubmed ID: 12032340
Power from the deep.
Nature biotechnology Aug, 2002 | Pubmed ID: 12148004
Microbial population genomics and ecology.
Current opinion in microbiology Oct, 2002 | Pubmed ID: 12354561
Microbiology: all in the packaging.
Nature Oct, 2002 | Pubmed ID: 12384680
Molecular diversity among marine picophytoplankton as revealed by psbA analyses.
Environmental microbiology Mar, 2003 | Pubmed ID: 12588300
Growth and methane oxidation rates of anaerobic methanotrophic archaea in a continuous-flow bioreactor.
Applied and environmental microbiology Sep, 2003 | Pubmed ID: 12957936
Identification of methyl coenzyme M reductase A (mcrA) genes associated with methane-oxidizing archaea.
Applied and environmental microbiology Sep, 2003 | Pubmed ID: 12957937
Novel Proteorhodopsin variants from the Mediterranean and Red Seas.
Environmental microbiology Oct, 2003 | Pubmed ID: 14510837
Proteorhodopsin genes are distributed among divergent marine bacterial taxa.
Proceedings of the National Academy of Sciences of the United States of America Oct, 2003 | Pubmed ID: 14566056
Microbiology: reconstructing the wild types.
Nature Mar, 2004 | Pubmed ID: 14999264
Microbial population genomics and ecology: the road ahead.
Environmental microbiology Sep, 2004 | Pubmed ID: 15305912
Different SAR86 subgroups harbour divergent proteorhodopsins.
Environmental microbiology Sep, 2004 | Pubmed ID: 15305915
Reverse methanogenesis: testing the hypothesis with environmental genomics.
Science (New York, N.Y.) Sep, 2004 | Pubmed ID: 15353801
Microbiology. Microbial life breathes deep.
Science (New York, N.Y.) Dec, 2004 | Pubmed ID: 15622564
Microbial community genomics in the ocean.
Nature reviews. Microbiology Jun, 2005 | Pubmed ID: 15886695
Growth and population dynamics of anaerobic methane-oxidizing archaea and sulfate-reducing bacteria in a continuous-flow bioreactor.
Applied and environmental microbiology Jul, 2005 | Pubmed ID: 16000782
Histones in crenarchaea.
Journal of bacteriology Aug, 2005 | Pubmed ID: 16030242
Metagenomic analysis reveals diverse polyketide synthase gene clusters in microorganisms associated with the marine sponge Discodermia dissoluta.
Applied and environmental microbiology Aug, 2005 | Pubmed ID: 16085882
Genomic perspectives in microbial oceanography.
Nature Sep, 2005 | Pubmed ID: 16163343
Community genomics among stratified microbial assemblages in the ocean's interior.
Science (New York, N.Y.) Jan, 2006 | Pubmed ID: 16439655
Comparative genomics of DNA fragments from six Antarctic marine planktonic bacteria.
Applied and environmental microbiology Feb, 2006 | Pubmed ID: 16461708
Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea.
Nature Feb, 2006 | Pubmed ID: 16482157
Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota.
PLoS biology Apr, 2006 | Pubmed ID: 16533068
Genomic islands and the ecology and evolution of Prochlorococcus.
Science (New York, N.Y.) Mar, 2006 | Pubmed ID: 16556843
Archaeal mysteries of the deep revealed.
Proceedings of the National Academy of Sciences of the United States of America Apr, 2006 | Pubmed ID: 16618931
Archaeal pre-mRNA splicing: a connection to hetero-oligomeric splicing endonuclease.
Biochemical and biophysical research communications Aug, 2006 | Pubmed ID: 16781672
Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum.
Proceedings of the National Academy of Sciences of the United States of America Nov, 2006 | Pubmed ID: 17114289
Proteorhodopsin photosystem gene clusters exhibit co-evolutionary trends and shared ancestry among diverse marine microbial phyla.
Environmental microbiology Apr, 2007 | Pubmed ID: 17359257
Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre.
Environmental microbiology May, 2007 | Pubmed ID: 17472632
Microbiology. Life on the thermodynamic edge.
Science (New York, N.Y.) Jul, 2007 | Pubmed ID: 17641187
Low genomic diversity in tropical oceanic N2-fixing cyanobacteria.
Proceedings of the National Academy of Sciences of the United States of America Nov, 2007 | Pubmed ID: 17971441
Design and testing of 'genome-proxy' microarrays to profile marine microbial communities.
Environmental microbiology Feb, 2008 | Pubmed ID: 18028413
Fosmids of novel marine Planctomycetes from the Namibian and Oregon coast upwelling systems and their cross-comparison with planctomycete genomes.
The ISME journal Sep, 2007 | Pubmed ID: 18043661
Microbial community gene expression in ocean surface waters.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2008 | Pubmed ID: 18316740
Phylogenetic analyses of ribosomal DNA-containing bacterioplankton genome fragments from a 4000 m vertical profile in the North Pacific Subtropical Gyre.
Environmental microbiology Sep, 2008 | Pubmed ID: 18494796
The microbial engines that drive Earth's biogeochemical cycles.
Science (New York, N.Y.) May, 2008 | Pubmed ID: 18497287
Genomic patterns of recombination, clonal divergence and environment in marine microbial populations.
The ISME journal Oct, 2008 | Pubmed ID: 18580971
Characterizing microbial diversity in production water from an Alaskan mesothermic petroleum reservoir with two independent molecular methods.
Environmental microbiology Jan, 2009 | Pubmed ID: 18771500
Modern microbial seascapes. Forward.
Nature reviews. Microbiology Oct, 2007 | Pubmed ID: 19086145
Near real-time, autonomous detection of marine bacterioplankton on a coastal mooring in Monterey Bay, California, using rRNA-targeted DNA probes.
Environmental microbiology May, 2009 | Pubmed ID: 19210704
The microbial ocean from genomes to biomes.
Nature May, 2009 | Pubmed ID: 19444206
Metatranscriptomics reveals unique microbial small RNAs in the ocean's water column.
Nature May, 2009 | Pubmed ID: 19444216
Comparative metagenomic analysis of a microbial community residing at a depth of 4,000 meters at station ALOHA in the North Pacific subtropical gyre.
Applied and environmental microbiology Aug, 2009 | Pubmed ID: 19542347
Widespread known and novel phosphonate utilization pathways in marine bacteria revealed by functional screening and metagenomic analyses.
Environmental microbiology Jan, 2010 | Pubmed ID: 19788654
Abundances of crenarchaeal amoA genes and transcripts in the Pacific Ocean.
Environmental microbiology Mar, 2010 | Pubmed ID: 20002133
Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics.
The ISME journal Jul, 2010 | Pubmed ID: 20220791
The light-driven proton pump proteorhodopsin enhances bacterial survival during tough times.
PLoS biology , 2010 | Pubmed ID: 20436957
Time-series analyses of Monterey Bay coastal microbial picoplankton using a 'genome proxy' microarray.
Environmental microbiology Jan, 2011 | Pubmed ID: 20695878
Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea.
Proceedings of the National Academy of Sciences of the United States of America Sep, 2010 | Pubmed ID: 20807744
A cryptic sulfur cycle in oxygen-minimum-zone waters off the Chilean coast.
Science (New York, N.Y.) Dec, 2010 | Pubmed ID: 21071631
Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean.
The ISME journal Jun, 2011 | Pubmed ID: 21151004
Microbial metatranscriptomics in a permanent marine oxygen minimum zone.
Environmental microbiology Jan, 2012 | Pubmed ID: 21210935
Meeting Report: Metagenomics, Metadata and MetaAnalysis (M3) at ISMB 2010.
Standards in genomic sciences , 2010 | Pubmed ID: 21304724
Meeting Report: BioSharing at ISMB 2010.
Standards in genomic sciences , 2010 | Pubmed ID: 21304729
Community transcriptomics reveals universal patterns of protein sequence conservation in natural microbial communities.
Genome biology , 2011 | Pubmed ID: 21426537
Light-induced transcriptional responses associated with proteorhodopsin-enhanced growth in a marine flavobacterium.
The ISME journal Oct, 2011 | Pubmed ID: 21472017
Metatranscriptomic analysis of autonomously collected and preserved marine bacterioplankton.
The ISME journal Dec, 2011 | Pubmed ID: 21716310
Metatranscriptomic analysis of sulfur oxidation genes in the endosymbiont of solemya velum.
Frontiers in microbiology , 2011 | Pubmed ID: 21738524
Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean.
Science (New York, N.Y.) Sep, 2011 | Pubmed ID: 21885783
Transcriptional responses of surface water marine microbial assemblages to deep-sea water amendment.
Environmental microbiology Jan, 2012 | Pubmed ID: 21981709
Phosphite utilization by the marine picocyanobacterium Prochlorococcus MIT9301.
Environmental microbiology Oct, 2011 | Pubmed ID: 22004069
Comparison of large-insert, small-insert and pyrosequencing libraries for metagenomic analysis.
The ISME journal Nov, 2012 | Pubmed ID: 22534608
Evolution. Microbial evolution in the wild.
Science (New York, N.Y.) Apr, 2012 | Pubmed ID: 22539708
PhnY and PhnZ comprise a new oxidative pathway for enzymatic cleavage of a carbon-phosphorus bond.
Journal of the American Chemical Society May, 2012 | Pubmed ID: 22564006
Experimental incubations elicit profound changes in community transcription in OMZ bacterioplankton.
PloS one , 2012 | Pubmed ID: 22615914
Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria.
Standards in genomic sciences Dec, 2011 | Pubmed ID: 22675578
Microbial community phylogenetic and trait diversity declines with depth in a marine oxygen minimum zone.
Ecology Jul, 2012 | Pubmed ID: 22919912
Microbial oceanography of anoxic oxygen minimum zones.
Proceedings of the National Academy of Sciences of the United States of America Oct, 2012 | Pubmed ID: 22967509
Oxygen minimum zones harbour novel viral communities with low diversity.
Environmental microbiology Nov, 2012 | Pubmed ID: 23039259
Public good dynamics drive evolution of iron acquisition strategies in natural bacterioplankton populations.
Proceedings of the National Academy of Sciences of the United States of America Dec, 2012 | Pubmed ID: 23169633
Pattern and synchrony of gene expression among sympatric marine microbial populations.
Proceedings of the National Academy of Sciences of the United States of America Feb, 2013 | Pubmed ID: 23345438
Characterization of canthaxanthin biosynthesis genes from an uncultured marine bacterium.
Environmental microbiology reports Dec, 2009 | Pubmed ID: 23765931
Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone.
The ISME journal Jan, 2014 | Pubmed ID: 24030599
Preface. Microbial metagenomics, metatranscriptomics, and metaproteomics.
Methods in enzymology , 2013 | Pubmed ID: 24060136
Distinct dissolved organic matter sources induce rapid transcriptional responses in coexisting populations of Prochlorococcus, Pelagibacter and the OM60 clade.
Environmental microbiology Sep, 2014 | Pubmed ID: 24118765
Metatranscriptomic and functional metagenomic analysis of methylphosphonate utilization by marine bacteria.
Frontiers in microbiology , 2013 | Pubmed ID: 24324460
Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype.
The ISME journal Jul, 2014 | Pubmed ID: 24451205
Functional characterization of flavobacteria rhodopsins reveals a unique class of light-driven chloride pump in bacteria.
Proceedings of the National Academy of Sciences of the United States of America May, 2014 | Pubmed ID: 24706784
Closely related phytoplankton species produce similar suites of dissolved organic matter.
Frontiers in microbiology , 2014 | Pubmed ID: 24748874
Planktonic Euryarchaeota are a significant source of archaeal tetraether lipids in the ocean.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2014 | Pubmed ID: 24946804
Ocean microbes. Multispecies diel transcriptional oscillations in open ocean heterotrophic bacterial assemblages.
Science (New York, N.Y.) Jul, 2014 | Pubmed ID: 25013074
Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains.
PLoS biology Aug, 2014 | Pubmed ID: 25093819
Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome.
Standards in genomic sciences Jun, 2014 | Pubmed ID: 25197450
Meeting report: Ocean 'omics science, technology and cyberinfrastructure: current challenges and future requirements (August 20-23, 2013).
Standards in genomic sciences Jun, 2014 | Pubmed ID: 25197495
Reply to Schouten et al.: Marine Group II planktonic Euryarchaeota are significant contributors to tetraether lipids in the ocean.
Proceedings of the National Academy of Sciences of the United States of America Oct, 2014 | Pubmed ID: 25239231
Alien invasions and gut "island biogeography".
Cell Oct, 2014 | Pubmed ID: 25303519
Oxygen at nanomolar levels reversibly suppresses process rates and gene expression in anammox and denitrification in the oxygen minimum zone off northern Chile.
mBio , 2014 | Pubmed ID: 25352619
Microbial eukaryote diversity in the marine oxygen minimum zone off northern Chile.
Frontiers in microbiology , 2014 | Pubmed ID: 25389417
Genomic potential for nitrogen assimilation in uncultivated members of Prochlorococcus from an anoxic marine zone.
The ISME journal Feb, 2015 | Pubmed ID: 25700337
Microbial community transcriptional networks are conserved in three domains at ocean basin scales.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2015 | Pubmed ID: 25775583
ACERCA DE JoVE
Copyright © 2024 MyJoVE Corporation. Todos los derechos reservados