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Computer and Information Science
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GenePath: a system for inference of genetic networks and proposal of genetic experiments.
Artificial intelligence in medicine Sep-Oct, 2003 | Pubmed ID: 12957783
Microarray data mining with visual programming.
Bioinformatics (Oxford, England) Feb, 2005 | Pubmed ID: 15308546
VizRank: finding informative data projections in functional genomics by machine learning.
Bioinformatics (Oxford, England) Feb, 2005 | Pubmed ID: 15358614
TA-clustering: cluster analysis of gene expression profiles through Temporal Abstractions.
International journal of medical informatics Aug, 2005 | Pubmed ID: 15941669
Developmentally regulated DNA methylation in Dictyostelium discoideum.
Eukaryotic cell Jan, 2006 | Pubmed ID: 16400165
dictyBase--a Dictyostelium bioinformatics resource update.
Nucleic acids research Jan, 2009 | Pubmed ID: 18974179
Polymorphic members of the lag gene family mediate kin discrimination in Dictyostelium.
Current biology : CB Apr, 2009 | Pubmed ID: 19285397
Rule-based clustering for gene promoter structure discovery.
Methods of information in medicine , 2009 | Pubmed ID: 19387502
dictyExpress: a Dictyostelium discoideum gene expression database with an explorative data analysis web-based interface.
BMC bioinformatics , 2009 | Pubmed ID: 19706156
Does replication groups scoring reduce false positive rate in SNP interaction discovery?
BMC genomics , 2010 | Pubmed ID: 20092660
Conserved developmental transcriptomes in evolutionarily divergent species.
Genome biology , 2010 | Pubmed ID: 20236529
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution.
Nature structural & molecular biology Jul, 2010 | Pubmed ID: 20601959
Inference of the molecular mechanism of action from genetic interaction and gene expression data.
Omics : a journal of integrative biology Aug, 2010 | Pubmed ID: 20726796
iCLIP predicts the dual splicing effects of TIA-RNA interactions.
PLoS biology , 2010 | Pubmed ID: 21048981
Characterizing the RNA targets and position-dependent splicing regulation by TDP-43.
Nature neuroscience Apr, 2011 | Pubmed ID: 21358640
SNPsyn: detection and exploration of SNP-SNP interactions.
Nucleic acids research Jul, 2011 | Pubmed ID: 21576219
miR669a and miR669q prevent skeletal muscle differentiation in postnatal cardiac progenitors.
The Journal of cell biology Jun, 2011 | Pubmed ID: 21708977
BzpF is a CREB-like transcription factor that regulates spore maturation and stability in Dictyostelium.
Developmental biology Oct, 2011 | Pubmed ID: 21810415
Analysis of alternative splicing associated with aging and neurodegeneration in the human brain.
Genome research Oct, 2011 | Pubmed ID: 21846794
Identification of evolutionarily conserved exons as regulated targets for the splicing activator tra2β in development.
PLoS genetics Dec, 2011 | Pubmed ID: 22194695
University of Ljubljana
Julian Konig1,
Kathi Zarnack2,
Gregor Rot3,
Tomaz Curk3,
Melis Kayikci1,
Blaz Zupan3,
Daniel J. Turner4,
Nicholas M. Luscombe2,
Jernej Ule1
1Laboratory of Molecular Biology, Medical Research Council - MRC,
2European Bioinformatics Institute, EMBL Heidelberg,
3Computer and Information Science, University of Ljubljana,
4Wellcome Trust Genome Campus, Wellcome Trust Sanger Institute
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