Athinoula A. Martinos Center for Biomedical Imaging
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Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.
Neuron Jan, 2002 | Pubmed ID: 11832223
The Local Structure of Space-variant Images.
Neural networks : the official journal of the International Neural Network Society Jul, 1997 | Pubmed ID: 12662872
Human cerebellum: surface-assisted cortical parcellation and volumetry with magnetic resonance imaging.
Journal of cognitive neuroscience May, 2003 | Pubmed ID: 12803969
Focal thinning of the cerebral cortex in multiple sclerosis.
Brain : a journal of neurology Aug, 2003 | Pubmed ID: 12805100
Regionally localized thinning of the cerebral cortex in schizophrenia.
Archives of general psychiatry Sep, 2003 | Pubmed ID: 12963669
Automatically parcellating the human cerebral cortex.
Cerebral cortex (New York, N.Y. : 1991) Jan, 2004 | Pubmed ID: 14654453
Thinning of the cerebral cortex in aging.
Cerebral cortex (New York, N.Y. : 1991) Jul, 2004 | Pubmed ID: 15054051
A magnetic resonance imaging study of cortical thickness in animal phobia.
Biological psychiatry May, 2004 | Pubmed ID: 15110739
Permutation tests for classification: towards statistical significance in image-based studies.
Information processing in medical imaging : proceedings of the ... conference Jul, 2003 | Pubmed ID: 15344469
Sequence-independent segmentation of magnetic resonance images.
NeuroImage , 2004 | Pubmed ID: 15501102
Age does not increase rate of forgetting over weeks--neuroanatomical volumes and visual memory across the adult life-span.
Journal of the International Neuropsychological Society : JINS Jan, 2005 | Pubmed ID: 15686603
Differing neuropsychological and neuroanatomical correlates of abnormal reading in early-stage semantic dementia and dementia of the Alzheimer type.
Neuropsychologia , 2005 | Pubmed ID: 15716156
Cortical volume and speed-of-processing are complementary in prediction of performance intelligence.
Neuropsychologia , 2005 | Pubmed ID: 15721183
Detection of entorhinal layer II using 7Tesla [corrected] magnetic resonance imaging.
Annals of neurology Apr, 2005 | Pubmed ID: 15786476
On-line automatic slice positioning for brain MR imaging.
NeuroImage Aug, 2005 | Pubmed ID: 15886023
Location and spatial profile of category-specific regions in human extrastriate cortex.
Human brain mapping Jan, 2006 | Pubmed ID: 15966002
Quantitative evaluation of automated skull-stripping methods applied to contemporary and legacy images: effects of diagnosis, bias correction, and slice location.
Human brain mapping Feb, 2006 | Pubmed ID: 15986433
Effects of age on volumes of cortex, white matter and subcortical structures.
Neurobiology of aging Oct, 2005 | Pubmed ID: 16005549
Thickness of ventromedial prefrontal cortex in humans is correlated with extinction memory.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2005 | Pubmed ID: 16024728
Aids to telemetry in the presurgical evaluation of epilepsy patients: MRI, MEG and other non-invasive imaging techniques.
Supplements to Clinical neurophysiology , 2004 | Pubmed ID: 16106650
Selective increase of cortical thickness in high-performing elderly--structural indices of optimal cognitive aging.
NeuroImage Feb, 2006 | Pubmed ID: 16176876
Meditation experience is associated with increased cortical thickness.
Neuroreport Nov, 2005 | Pubmed ID: 16272874
Orbitofrontal thickness, retention of fear extinction, and extraversion.
Neuroreport Nov, 2005 | Pubmed ID: 16272877
Reliability in multi-site structural MRI studies: effects of gradient non-linearity correction on phantom and human data.
NeuroImage Apr, 2006 | Pubmed ID: 16300968
Comparison of manual and automatic section positioning of brain MR images.
Radiology Apr, 2006 | Pubmed ID: 16507753
An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.
NeuroImage Jul, 2006 | Pubmed ID: 16530430
Regional cortical thickness matters in recall after months more than minutes.
NeuroImage Jul, 2006 | Pubmed ID: 16540346
The functional and structural significance of the frontal shift in the old/new ERP effect.
Brain research Apr, 2006 | Pubmed ID: 16542641
Reliability of MRI-derived measurements of human cerebral cortical thickness: the effects of field strength, scanner upgrade and manufacturer.
NeuroImage Aug, 2006 | Pubmed ID: 16651008
Mapping an intrinsic MR property of gray matter in auditory cortex of living humans: a possible marker for primary cortex and hemispheric differences.
NeuroImage Oct, 2006 | Pubmed ID: 16806989
Detailed semiautomated MRI based morphometry of the neonatal brain: preliminary results.
NeuroImage Sep, 2006 | Pubmed ID: 16857388
Human cerebral cortex: a system for the integration of volume- and surface-based representations.
NeuroImage Oct, 2006 | Pubmed ID: 16920366
A technique for the deidentification of structural brain MR images.
Human brain mapping Sep, 2007 | Pubmed ID: 17295313
Neural activity is modulated by trial history: a functional magnetic resonance imaging study of the effects of a previous antisaccade.
The Journal of neuroscience : the official journal of the Society for Neuroscience Feb, 2007 | Pubmed ID: 17301186
A genetic algorithm for the topology correction of cortical surfaces.
Information processing in medical imaging : proceedings of the ... conference , 2005 | Pubmed ID: 17354712
Cortical atrophy is relevant in multiple sclerosis at clinical onset.
Journal of neurology Sep, 2007 | Pubmed ID: 17361339
Cognitive function, P3a/P3b brain potentials, and cortical thickness in aging.
Human brain mapping Nov, 2007 | Pubmed ID: 17370342
Changes in cerebral cortex of children treated for medulloblastoma.
International journal of radiation oncology, biology, physics Jul, 2007 | Pubmed ID: 17379433
Atlas renormalization for improved brain MR image segmentation across scanner platforms.
IEEE transactions on medical imaging Apr, 2007 | Pubmed ID: 17427735
Geometrically accurate topology-correction of cortical surfaces using nonseparating loops.
IEEE transactions on medical imaging Apr, 2007 | Pubmed ID: 17427739
Cortical surface shape analysis based on spherical wavelets.
IEEE transactions on medical imaging Apr, 2007 | Pubmed ID: 17427744
Abnormal cortical folding patterns within Broca's area in schizophrenia: evidence from structural MRI.
Schizophrenia research Aug, 2007 | Pubmed ID: 17490861
Reduced microstructural integrity of the white matter underlying anterior cingulate cortex is associated with increased saccadic latency in schizophrenia.
NeuroImage Aug, 2007 | Pubmed ID: 17590354
Phase maps reveal cortical architecture.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2007 | Pubmed ID: 17609374
Geometry driven volumetric registration.
Information processing in medical imaging : proceedings of the ... conference , 2007 | Pubmed ID: 17633739
A role for the human dorsal anterior cingulate cortex in fear expression.
Biological psychiatry Nov, 2007 | Pubmed ID: 17707349
Heritability of brain morphology related to schizophrenia: a large-scale automated magnetic resonance imaging segmentation study.
Biological psychiatry Mar, 2008 | Pubmed ID: 17727823
An MRI-based method for measuring volume, thickness and surface area of entorhinal, perirhinal, and posterior parahippocampal cortex.
Neurobiology of aging Mar, 2009 | Pubmed ID: 17850926
Differential effects of aging and Alzheimer's disease on medial temporal lobe cortical thickness and surface area.
Neurobiology of aging Mar, 2009 | Pubmed ID: 17869384
Feasibility of multi-site clinical structural neuroimaging studies of aging using legacy data.
Neuroinformatics , 2007 | Pubmed ID: 17999200
Effects of registration regularization and atlas sharpness on segmentation accuracy.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention , 2007 | Pubmed ID: 18051118
Accurate prediction of V1 location from cortical folds in a surface coordinate system.
NeuroImage Feb, 2008 | Pubmed ID: 18055222
Cortical folding patterns and predicting cytoarchitecture.
Cerebral cortex (New York, N.Y. : 1991) Aug, 2008 | Pubmed ID: 18079129
Brain morphometry with multiecho MPRAGE.
NeuroImage Apr, 2008 | Pubmed ID: 18242102
The effect of early human diet on caudate volumes and IQ.
Pediatric research Mar, 2008 | Pubmed ID: 18287970
The intrinsic shape of human and macaque primary visual cortex.
Cerebral cortex (New York, N.Y. : 1991) Nov, 2008 | Pubmed ID: 18308709
Cerebral cortex and the clinical expression of Huntington's disease: complexity and heterogeneity.
Brain : a journal of neurology Apr, 2008 | Pubmed ID: 18337273
The relationship between diffusion tensor imaging and volumetry as measures of white matter properties.
NeuroImage Oct, 2008 | Pubmed ID: 18620064
The cortical signature of Alzheimer's disease: regionally specific cortical thinning relates to symptom severity in very mild to mild AD dementia and is detectable in asymptomatic amyloid-positive individuals.
Cerebral cortex (New York, N.Y. : 1991) Mar, 2009 | Pubmed ID: 18632739
Effects of registration regularization and atlas sharpness on segmentation accuracy.
Medical image analysis Oct, 2008 | Pubmed ID: 18667352
Collaborative computational anatomy: an MRI morphometry study of the human brain via diffeomorphic metric mapping.
Human brain mapping Jul, 2009 | Pubmed ID: 18781592
Model-based segmentation of hippocampal subfields in ultra-high resolution in vivo MRI.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention , 2008 | Pubmed ID: 18979753
Shape analysis with overcomplete spherical wavelets.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention , 2008 | Pubmed ID: 18979780
Spherical demons: fast surface registration.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention , 2008 | Pubmed ID: 18979813
Regional white matter volume differences in nondemented aging and Alzheimer's disease.
NeuroImage Feb, 2009 | Pubmed ID: 19027860
High consistency of regional cortical thinning in aging across multiple samples.
Cerebral cortex (New York, N.Y. : 1991) Sep, 2009 | Pubmed ID: 19150922
MRI-derived measurements of human subcortical, ventricular and intracranial brain volumes: Reliability effects of scan sessions, acquisition sequences, data analyses, scanner upgrade, scanner vendors and field strengths.
NeuroImage May, 2009 | Pubmed ID: 19233293
Combined volumetric and surface registration.
IEEE transactions on medical imaging Apr, 2009 | Pubmed ID: 19273000
Distinct genetic influences on cortical surface area and cortical thickness.
Cerebral cortex (New York, N.Y. : 1991) Nov, 2009 | Pubmed ID: 19299253
Locating the functional and anatomical boundaries of human primary visual cortex.
NeuroImage Jul, 2009 | Pubmed ID: 19328238
Predicting the location of entorhinal cortex from MRI.
NeuroImage Aug, 2009 | Pubmed ID: 19376238
Target-specific contrast agents for magnetic resonance microscopy.
NeuroImage Jun, 2009 | Pubmed ID: 19385012
Fully-automated, multi-stage hippocampus mapping in very mild Alzheimer disease.
Hippocampus Jun, 2009 | Pubmed ID: 19405129
Automated segmentation of hippocampal subfields from ultra-high resolution in vivo MRI.
Hippocampus Jun, 2009 | Pubmed ID: 19405131
Widespread reductions of cortical thickness in schizophrenia and spectrum disorders and evidence of heritability.
Archives of general psychiatry May, 2009 | Pubmed ID: 19414706
Cognitive function and brain structure correlations in healthy elderly East Asians.
NeuroImage May, 2009 | Pubmed ID: 19457386
Automated MRI measures identify individuals with mild cognitive impairment and Alzheimer's disease.
Brain : a journal of neurology Aug, 2009 | Pubmed ID: 19460794
Increased sensitivity to effects of normal aging and Alzheimer's disease on cortical thickness by adjustment for local variability in gray/white contrast: a multi-sample MRI study.
NeuroImage Oct, 2009 | Pubmed ID: 19501655
Consistent neuroanatomical age-related volume differences across multiple samples.
Neurobiology of aging May, 2011 | Pubmed ID: 19570593
Accurate and robust brain image alignment using boundary-based registration.
NeuroImage Oct, 2009 | Pubmed ID: 19573611
Minute effects of sex on the aging brain: a multisample magnetic resonance imaging study of healthy aging and Alzheimer's disease.
The Journal of neuroscience : the official journal of the Society for Neuroscience Jul, 2009 | Pubmed ID: 19587284
Anatomical atlas-guided diffuse optical tomography of brain activation.
NeuroImage Jan, 2010 | Pubmed ID: 19643185
Segmental brain volumes and cognitive and perceptual correlates in 15-year-old adolescents with low birth weight.
The Journal of pediatrics Dec, 2009 | Pubmed ID: 19683725
Spherical demons: fast diffeomorphic landmark-free surface registration.
IEEE transactions on medical imaging Mar, 2010 | Pubmed ID: 19709963
Genetic and environmental influences on the size of specific brain regions in midlife: the VETSA MRI study.
NeuroImage Jan, 2010 | Pubmed ID: 19786105
Altered white matter microstructure in the corpus callosum in Huntington's disease: implications for cortical "disconnection".
NeuroImage Feb, 2010 | Pubmed ID: 19850138
Cortical thickness is influenced by regionally specific genetic factors.
Biological psychiatry Mar, 2010 | Pubmed ID: 19963208
Impact of breast milk on intelligence quotient, brain size, and white matter development.
Pediatric research Apr, 2010 | Pubmed ID: 20035247
Evaluation of volume-based and surface-based brain image registration methods.
NeuroImage May, 2010 | Pubmed ID: 20123029
Atlas generation for subcortical and ventricular structures with its applications in shape analysis.
IEEE transactions on image processing : a publication of the IEEE Signal Processing Society Jun, 2010 | Pubmed ID: 20129863
Improved tractography alignment using combined volumetric and surface registration.
NeuroImage May, 2010 | Pubmed ID: 20153833
Salivary cortisol and prefrontal cortical thickness in middle-aged men: A twin study.
NeuroImage Nov, 2010 | Pubmed ID: 20156572
Heritability of brain ventricle volume: converging evidence from inconsistent results.
Neurobiology of aging Jan, 2012 | Pubmed ID: 20363053
Task-optimal registration cost functions.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention , 2009 | Pubmed ID: 20426037
Supervised nonparametric image parcellation.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention , 2009 | Pubmed ID: 20426218
Laminar analysis of 7T BOLD using an imposed spatial activation pattern in human V1.
NeuroImage Oct, 2010 | Pubmed ID: 20460157
Learning task-optimal registration cost functions for localizing cytoarchitecture and function in the cerebral cortex.
IEEE transactions on medical imaging Jul, 2010 | Pubmed ID: 20529736
Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature.
NeuroImage Oct, 2010 | Pubmed ID: 20547229
A generative model for image segmentation based on label fusion.
IEEE transactions on medical imaging Oct, 2010 | Pubmed ID: 20562040
Automated MRI measures predict progression to Alzheimer's disease.
Neurobiology of aging Aug, 2010 | Pubmed ID: 20570399
Genetic patterns of correlation among subcortical volumes in humans: results from a magnetic resonance imaging twin study.
Human brain mapping Apr, 2011 | Pubmed ID: 20572207
Direct visualization of the perforant pathway in the human brain with ex vivo diffusion tensor imaging.
Frontiers in human neuroscience , 2010 | Pubmed ID: 20577631
Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age.
NeuroImage Oct, 2010 | Pubmed ID: 20621657
Highly accurate inverse consistent registration: a robust approach.
NeuroImage Dec, 2010 | Pubmed ID: 20637289
Toward implementing an MRI-based PET attenuation-correction method for neurologic studies on the MR-PET brain prototype.
Journal of nuclear medicine : official publication, Society of Nuclear Medicine Sep, 2010 | Pubmed ID: 20810759
Nonparametric Mixture Models for Supervised Image Parcellation.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention Sep, 2009 | Pubmed ID: 20814584
Selective disruption of the cerebral neocortex in Alzheimer's disease.
PloS one , 2010 | Pubmed ID: 20886094
Thickness of the human cerebral cortex is associated with metrics of cerebrovascular health in a normative sample of community dwelling older adults.
NeuroImage Feb, 2011 | Pubmed ID: 21035552
Brain structure correlates of individual differences in the acquisition and inhibition of conditioned fear.
Cerebral cortex (New York, N.Y. : 1991) Sep, 2011 | Pubmed ID: 21263037
Avoiding asymmetry-induced bias in longitudinal image processing.
NeuroImage Jul, 2011 | Pubmed ID: 21376812
Genetic and environmental contributions to regional cortical surface area in humans: a magnetic resonance imaging twin study.
Cerebral cortex (New York, N.Y. : 1991) Oct, 2011 | Pubmed ID: 21378112
Connectivity-based segmentation of human amygdala nuclei using probabilistic tractography.
NeuroImage Jun, 2011 | Pubmed ID: 21396459
Amyloid-β associated cortical thinning in clinically normal elderly.
Annals of neurology Jun, 2011 | Pubmed ID: 21437929
A tale of two factors: what determines the rate of progression in Huntington's disease? A longitudinal MRI study.
Movement disorders : official journal of the Movement Disorder Society Aug, 2011 | Pubmed ID: 21611979
The organization of the human cerebral cortex estimated by intrinsic functional connectivity.
Journal of neurophysiology Sep, 2011 | Pubmed ID: 21653723
The dynamics of cortical and hippocampal atrophy in Alzheimer disease.
Archives of neurology Aug, 2011 | Pubmed ID: 21825241
Presence of ApoE ε4 allele associated with thinner frontal cortex in middle age.
Journal of Alzheimer's disease : JAD , 2011 | Pubmed ID: 21971450
Genetic influences on hippocampal volume differ as a function of testosterone level in middle-aged men.
NeuroImage Jan, 2012 | Pubmed ID: 21983185
Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy.
Frontiers in neuroinformatics , 2011 | Pubmed ID: 22016733
Genetic influences on cortical regionalization in the human brain.
Neuron Nov, 2011 | Pubmed ID: 22099457
Entorhinal verrucae geometry is coincident and correlates with Alzheimer's lesions: a combined neuropathology and high-resolution ex vivo MRI analysis.
Acta neuropathologica Jan, 2012 | Pubmed ID: 22160360
The Association between a Polygenic Alzheimer Score and Cortical Thickness in Clinically Normal Subjects.
Cerebral cortex (New York, N.Y. : 1991) Dec, 2011 | Pubmed ID: 22169231
Volumetric navigators for prospective motion correction and selective reacquisition in neuroanatomical MRI.
Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine Dec, 2011 | Pubmed ID: 22213578
FreeSurfer.
NeuroImage Jan, 2012 | Pubmed ID: 22248573
Atlas-based segmentation for globus pallidus internus targeting on low-resolution MRI.
Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference Aug, 2011 | Pubmed ID: 22255635
Marie Schaer1,
Meritxell Bach Cuadra2,3,
Nick Schmansky4,
Bruce Fischl4,
Jean-Philippe Thiran2,
Stephan Eliez1
1Department of Psychiatry, University of Geneva School of Medicine,
2Signal Processing Laboratory, École Polytechnique Fédérale de Lausanne,
3Department of Radiology, University Hospital Center and University of Lausanne,
4Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital