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Southwest Jiaotong University

7 ARTICLES PUBLISHED IN JoVE

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Chemistry

Determination of the Gas-phase Acidities of Oligopeptides
Jianhua Ren 1, Ashish Sawhney 1, Yuan Tian 1, Bhupinder Padda 1, Patrick Batoon 1
1Department of Chemistry, University of the Pacific

The determination of the gas-phase acidities of cysteine-containing oligopeptides is described. The experiments are performed using a triple quadrupole mass spectrometer. The relative acidities of the peptides are measured using collision-induced dissociation experiments, and the quantitative acidities are determined using the extended Cooks kinetic method.

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Biology

Quantitative Localization of a Golgi Protein by Imaging Its Center of Fluorescence Mass
Hieng Chiong Tie 1, Bing Chen 1, Xiuping Sun 1, Li Cheng 2,3, Lei Lu 1
1School of Biological Sciences, Nanyang Technological University, 2Bioinformatics Institute, 3School of Computing, National University of Singapore

The precise localization of Golgi residents is essential for understanding the cellular functions of the Golgi. However, conventional optical microscopy is unable to resolve the sub-Golgi structure. Here we describe the protocol for a conventional microscopy based super-resolution method to quantitatively determine the sub-Golgi localization of a protein.

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Neuroscience

Isolation and Culture of Primary Neurons and Glia from Adult Rat Urinary Bladder
Rui Wang 1, Zi-tong Huang 3, Wen-kang Ren 1, Jiao Zhang 1, Yao Zhang 1, Bo Tan 3, Ping Huang 1,2, Hong-ying Cao 1,2
1School of Pharmaceutical Sciences, Guangzhou University of Chinese Medicine, 2Dongguan & Guangzhou University of Chinese Medicine Cooperative Academy of Mathematical Engineering for Chinese Medicine, Guangzhou University of Chinese Medicine, 3School of Basic Medical Sciences, Guangzhou University of Chinese Medicine

This protocol attempts to establish a repeatable protocol for primary neurons and glia isolation from rat bladder for further cellular experiments.

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Immunology and Infection

Investigating Target Gene Function in a CD40 Agonistic Antibody-induced Colitis Model using CRISPR/Cas9-based Technologies
Sean Graham 1, Lei Gao 1, Rui Wang 1
1AbbVie, Cambridge Research Center

Here, we describe the methodology to knock out a gene of interest in the immune system using clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated endonuclease (Cas9)-based technologies and the evaluation of these mice in a cluster of differentiation 40 (CD40) agonistic antibody-induced colitis model.

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Medicine

Organ Ischemia-Reperfusion Injury by Simulating Hemodynamic Changes in Rat Liver Transplant Model
Yuan Yuan 1, Meng-hua Chen 1, Jing Huang 2, Yuan Tian 2, Ke Qin 3, Zhang Yuan 1, Wen-yan Wang 1, Zhi-jiang Wu 1, Xin-yue Tian 1, Yubin Zhang 4
1Department of Intensive Care Unit, The Second Affiliated Hospital of Guangxi Medical University, 2Department of hepatobiliary surgery, The Affiliated Ningbo Medical Center Lihuili Hospital of Medical School of Ningbo University, 3Department of transplantation, The Second Affiliated Hospital of Guangxi Medical University, 4Digital Technology and Engineering college, Ningbo University of Finance & Economics

This paper provides a detailed description of how to build an animal model of the anhepatic phase (liver ischemia) in rats to facilitate basic research into ischemia-reperfusion injury after liver transplantation.

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Immunology and Infection

Screening Peptides that Activate MRGPRX2 using Engineered HEK Cells
Shammy Raj 1, Lei Lu 2, Larry D. Unsworth 1
1Department of Chemical and Materials Engineering, Donadeo Innovation Centre for Engineering, University of Alberta, 2School of Life Science and Engineering, Southwest Jiaotong University

Techniques for generating a library of short peptides that can activate mast cells via the MRGPRX2 receptor are described. Associated techniques are easy, inexpensive, and can be extended to other cell receptors.

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Chemistry

Construction of Cyclic Cell-Penetrating Peptides for Enhanced Penetration of Biological Barriers
Dan Fang 1, Rui Wang 1, Xinyi Yu 1, Yuan Tian 1
1Sichuan Engineering Research Center for Biomimetic Synthesis of Natural Drugs, School of Life Science and Engineering, Southwest Jiaotong University

This protocol describes the synthesis of cyclic cell-penetrating peptides with aromatic cross-links and the evaluation of their permeability across biological barriers.

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