The virology Core at the HIV Drug Resistance Program
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HIV-1 Fitness and Replication Capacity: What Are They and Can They Help in Patient Management?
Current infectious disease reports Feb, 2003 | Pubmed ID: 12525294
Innate immunity in human immunodeficiency virus infection: effect of viremia on natural killer cell function.
The Journal of infectious diseases Apr, 2003 | Pubmed ID: 12660917
New real-time reverse transcriptase-initiated PCR assay with single-copy sensitivity for human immunodeficiency virus type 1 RNA in plasma.
Journal of clinical microbiology Oct, 2003 | Pubmed ID: 14532178
Nonrandom HIV-1 infection and double infection via direct and cell-mediated pathways.
Proceedings of the National Academy of Sciences of the United States of America Jan, 2004 | Pubmed ID: 14707263
Changes in hepatitis C viral response after initiation of highly active antiretroviral therapy and control of HIV viremia in chronically co-infected individuals.
HIV clinical trials Jan-Feb, 2004 | Pubmed ID: 15002084
A proof-of-concept study of short-cycle intermittent antiretroviral therapy with a once-daily regimen of didanosine, lamivudine, and efavirenz for the treatment of chronic HIV infection.
The Journal of infectious diseases Jun, 2004 | Pubmed ID: 15143462
Prion Diseases: Update on Mad Cow Disease, Variant Creutzfeldt-Jakob Disease, and the Transmissible Spongiform Encephalopathies.
Current infectious disease reports Aug, 2004 | Pubmed ID: 15265460
Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis.
Journal of clinical microbiology Jan, 2005 | Pubmed ID: 15635002
Mechanism for nucleoside analog-mediated abrogation of HIV-1 replication: balance between RNase H activity and nucleotide excision.
Proceedings of the National Academy of Sciences of the United States of America Feb, 2005 | Pubmed ID: 15684061
Mechanisms of nonrandom human immunodeficiency virus type 1 infection and double infection: preference in virus entry is important but is not the sole factor.
Journal of virology Apr, 2005 | Pubmed ID: 15767415
Pravastatin does not have a consistent antiviral effect in chronically HIV-infected individuals on antiretroviral therapy.
AIDS (London, England) Jul, 2005 | Pubmed ID: 15958846
Tenofovir disoproxil fumarate and an optimized background regimen of antiretroviral agents as salvage therapy for pediatric HIV infection.
Pediatrics Dec, 2005 | Pubmed ID: 16291735
Selection and persistence of non-nucleoside reverse transcriptase inhibitor-resistant HIV-1 in patients starting and stopping non-nucleoside therapy.
AIDS (London, England) Mar, 2006 | Pubmed ID: 16514300
Consistent effects of TSG101 genetic variability on multiple outcomes of exposure to human immunodeficiency virus type 1.
Journal of virology Jul, 2006 | Pubmed ID: 16809281
Tenofovir disoproxil fumarate and an optimized background regimen of antiretroviral agents as salvage therapy: impact on bone mineral density in HIV-infected children.
Pediatrics Sep, 2006 | Pubmed ID: 16923923
Mutations in the connection domain of HIV-1 reverse transcriptase increase 3'-azido-3'-deoxythymidine resistance.
Proceedings of the National Academy of Sciences of the United States of America Jan, 2007 | Pubmed ID: 17179211
Enfuvirtide antiviral activity despite rebound viremia and resistance mutations: fitness tampering or a case of persistent braking on entering?
The Journal of infectious diseases Feb, 2007 | Pubmed ID: 17205468
ART suppresses plasma HIV-1 RNA to a stable set point predicted by pretherapy viremia.
PLoS pathogens Apr, 2007 | Pubmed ID: 17411338
Suppression of viremia and evolution of human immunodeficiency virus type 1 drug resistance in a macaque model for antiretroviral therapy.
Journal of virology Nov, 2007 | Pubmed ID: 17855539
Frequent polymorphism at drug resistance sites in HIV-1 protease and reverse transcriptase.
AIDS (London, England) Feb, 2008 | Pubmed ID: 18301062
Low-level viremia persists for at least 7 years in patients on suppressive antiretroviral therapy.
Proceedings of the National Academy of Sciences of the United States of America Mar, 2008 | Pubmed ID: 18332425
Variation in the major surface glycoprotein genes in Pneumocystis jirovecii.
The Journal of infectious diseases Sep, 2008 | Pubmed ID: 18627244
Efavirenz induces CYP2B6-mediated hydroxylation of bupropion in healthy subjects.
Journal of acquired immune deficiency syndromes (1999) Dec, 2008 | Pubmed ID: 18989234
Iatrogenic Cushing syndrome after epidural triamcinolone injections in an HIV type 1-infected patient receiving therapy with ritonavir-lopinavir.
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America Dec, 2008 | Pubmed ID: 18991509
Lytic granule loading of CD8+ T cells is required for HIV-infected cell elimination associated with immune control.
Immunity Dec, 2008 | Pubmed ID: 19062316
Inferiority of IL-2 alone versus IL-2 with HAART in maintaining CD4 T cell counts during HAART interruption: a randomized controlled trial.
AIDS (London, England) Jan, 2009 | Pubmed ID: 19098490
Regimen simplification to atazanavir-ritonavir alone as maintenance antiretroviral therapy: final 48-week clinical and virologic outcomes.
The Journal of infectious diseases Mar, 2009 | Pubmed ID: 19191590
Evaluation of the pathogenesis of decreasing CD4(+) T cell counts in human immunodeficiency virus type 1-infected patients receiving successfully suppressive antiretroviral therapy.
The Journal of infectious diseases Jun, 2009 | Pubmed ID: 19432547
Subtype-specific differences in the human immunodeficiency virus type 1 reverse transcriptase connection subdomain of CRF01_AE are associated with higher levels of resistance to 3'-azido-3'-deoxythymidine.
Journal of virology Sep, 2009 | Pubmed ID: 19553318
RT-SHIV subpopulation dynamics in infected macaques during anti-HIV therapy.
Retrovirology , 2009 | Pubmed ID: 19889213
Optimization of allele-specific PCR using patient-specific HIV consensus sequences for primer design.
Journal of virological methods Mar, 2010 | Pubmed ID: 19948190
Comparison of standard PCR/cloning to single genome sequencing for analysis of HIV-1 populations.
Journal of virological methods Sep, 2010 | Pubmed ID: 20451557
Patterns of Human Immunodeficiency Virus type 1 recombination ex vivo provide evidence for coadaptation of distant sites, resulting in purifying selection for intersubtype recombinants during replication.
Journal of virology Aug, 2010 | Pubmed ID: 20504919
HIV-1 continues to replicate and evolve in patients with natural control of HIV infection.
Journal of virology Dec, 2010 | Pubmed ID: 20926564
Current status of xenotropic murine leukemia virus-related retrovirus in chronic fatigue syndrome and prostate cancer: reach for a scorecard, not a prescription pad.
The Journal of infectious diseases Nov, 2010 | Pubmed ID: 20936981
XMRV: a new virus in prostate cancer?
Cancer research Dec, 2010 | Pubmed ID: 20966126
Characterization of the meiosis-specific recombinase Dmc1 of pneumocystis.
The Journal of infectious diseases Dec, 2010 | Pubmed ID: 21050123
Genetic diversity of simian immunodeficiency virus encoding HIV-1 reverse transcriptase persists in macaques despite antiretroviral therapy.
Journal of virology Jan, 2011 | Pubmed ID: 21084490
Targeting viral reservoirs: ability of antiretroviral therapy to stop viral replication.
Current opinion in HIV and AIDS Jan, 2011 | Pubmed ID: 21228755
CD4 and CD8 T cell immune activation during chronic HIV infection: roles of homeostasis, HIV, type I IFN, and IL-7.
Journal of immunology (Baltimore, Md. : 1950) Feb, 2011 | Pubmed ID: 21257970
High dose atorvastatin decreases cellular markers of immune activation without affecting HIV-1 RNA levels: results of a double-blind randomized placebo controlled clinical trial.
The Journal of infectious diseases Mar, 2011 | Pubmed ID: 21325137
Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection.
Proceedings of the National Academy of Sciences of the United States of America Apr, 2011 | Pubmed ID: 21436045
Transmitted raltegravir resistance in an HIV-1 CRF_AG-infected patient.
Antiviral therapy , 2011 | Pubmed ID: 21447876
Majority of CD4+ T cells from peripheral blood of HIV-1-infected individuals contain only one HIV DNA molecule.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2011 | Pubmed ID: 21690402
Genotypic resistance at viral rebound among patients who received lopinavir/ritonavir-based or efavirenz-based first antiretroviral therapy in South Africa.
Journal of acquired immune deficiency syndromes (1999) Nov, 2011 | Pubmed ID: 21694608
Clinical management of HIV drug resistance.
Viruses Apr, 2011 | Pubmed ID: 21994737
Short-course raltegravir intensification does not increase 2 long terminal repeat episomal HIV-1 DNA in patients on effective antiretroviral therapy.
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America Feb, 2012 | Pubmed ID: 22016501
Short-course Combivir after single-dose nevirapine reduces but does not eliminate the emergence of nevirapine resistance in women.
Antiviral therapy Nov, 2011 | Pubmed ID: 22293443