Yan Wei Lim

Spatial distribution of microbial communities in the cystic fibrosis lung.

Case studies of the spatial heterogeneity of DNA viruses in the cystic fibrosis lung.

Metagenomic analysis of viruses in reclaimed water.

TagCleaner: Identification and removal of tag sequences from genomic and metagenomic datasets.

Broad surveys of DNA viral diversity obtained through viral metagenomics of mosquitoes.

Identification and removal of ribosomal RNA sequences from metatranscriptomes.

Metagenomics and metatranscriptomics: Windows on CF-associated viral and microbial communities.

Identification of a novel human papillomavirus by metagenomic analysis of samples from patients with febrile respiratory illness.

Mechanistic model of Rothia mucilaginosa adaptation toward persistence in the CF lung, based on a genome reconstructed from metagenomic data.

Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation.

Clinical insights from metagenomic analysis of sputum samples from patients with cystic fibrosis.

Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung.

The upper respiratory tract as a microbial source for pulmonary infections in cystic fibrosis. Parallels from island biogeography.

Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors.

Sequencing at sea: challenges and experiences in Ion Torrent PGM sequencing during the 2013 Southern Line Islands Research Expedition.

Species-specific viromes in the ancestral holobiont hydra.

A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation.