Patrick Giavalisco

Protein identification by MALDI-TOF-MS peptide mapping: a new strategy.

Extraction of proteins from plant tissues for two-dimensional electrophoresis analysis.

Large-scale plant proteomics.

Intra- and interspecific variation in primate gene expression patterns.

Proteomics of curcurbit phloem exudate reveals a network of defence proteins.

Proteome analysis of Arabidopsis thaliana by two-dimensional gel electrophoresis and matrix-assisted laser desorption/ionisation-time of flight mass spectrometry.

High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome.

Analysis of xylem sap proteins from Brassica napus.

Evaluation of two-dimensional electrophoresis and liquid chromatography--tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples.

Transformation and other factors of the peptide mass spectrometry pairwise peak-list comparison process.

Towards the proteome of Brassica napus phloem sap.

High MS-compatibility of silver nitrate-stained protein spots from 2-DE gels using ZipPlates and AnchorChips for successful protein identification.

Pseudomonas syringae type III effector AvrPtoB is phosphorylated in plant cells on serine 258, promoting its virulence activity.

High-resolution direct infusion-based mass spectrometry in combination with whole 13C metabolome isotope labeling allows unambiguous assignment of chemical sum formulas.

PROTEOMER: A workflow-optimized laboratory information management system for 2-D electrophoresis-centered proteomics.

RNA interference of LIN5 in tomato confirms its role in controlling Brix content, uncovers the influence of sugars on the levels of fruit hormones, and demonstrates the importance of sucrose cleavage for normal fruit development and fertility.

13C isotope-labeled metabolomes allowing for improved compound annotation and relative quantification in liquid chromatography-mass spectrometry-based metabolomic research.

Intersection of the tocopherol and plastoquinol metabolic pathways at the plastoglobule.

SlCCD7 controls strigolactone biosynthesis, shoot branching and mycorrhiza-induced apocarotenoid formation in tomato.

Discrimination of wine attributes by metabolome analysis.

Metabolomics unravel contrasting effects of biodiversity on the performance of individual plant species.

Demethylation of oligogalacturonides by FaPE1 in the fruits of the wild strawberry Fragaria vesca triggers metabolic and transcriptional changes associated with defence and development of the fruit.

Analysis of short-term changes in the Arabidopsis thaliana glycerolipidome in response to temperature and light.

Sample amount alternatives for data adjustment in comparative cyanobacterial metabolomics.

A topological map of the compartmentalized Arabidopsis thaliana leaf metabolome.

Gibberellin biosynthesis and signalling during development of the strawberry receptacle.

Rapid metabolic evolution in human prefrontal cortex.

Elemental formula annotation of polar and lipophilic metabolites using (13) C, (15) N and (34) S isotope labelling, in combination with high-resolution mass spectrometry.

Corn hybrids display lower metabolite variability and complex metabolite inheritance patterns.

Toward the storage metabolome: profiling the barley vacuole.

High-resolution plant metabolomics: from mass spectral features to metabolites and from whole-cell analysis to subcellular metabolite distributions.

Ultra performance liquid chromatography and high resolution mass spectrometry for the analysis of plant lipids.

Analysis of the compartmentalized metabolome - a validation of the non-aqueous fractionation technique.

Proteaceae from severely phosphorus-impoverished soils extensively replace phospholipids with galactolipids and sulfolipids during leaf development to achieve a high photosynthetic phosphorus-use-efficiency.

Differential remodeling of the lipidome during cold acclimation in natural accessions of Arabidopsis thaliana.

Systemic analysis of inducible target of rapamycin mutants reveal a general metabolic switch controlling growth in Arabidopsis thaliana.

Analysis of the interface between primary and secondary metabolism in catharanthus roseus cell cultures using (13)C-stable isotope feeding and coupled mass spectrometry.

Long-distance signaling in bypass1 mutants: bioassay development reveals the bps signal to be a metabolite.

Two Pdk1 phosphorylation sites on the plant cell death suppressor Adi3 contribute to substrate phosphorylation.

Comprehensive dissection of spatiotemporal metabolic shifts in primary, secondary, and lipid metabolism during developmental senescence in Arabidopsis.

Differential regulation of carbon partitioning by the central growth regulator target of rapamycin (TOR).

Metabolic analysis of adaptation to short-term changes in culture conditions of the marine diatom Thalassiosira pseudonana.

Analysis of subcellular metabolite distributions within Arabidopsis thaliana leaf tissue: a primer for subcellular metabolomics.

Arabidopsis poly(A) polymerase PAPS1 limits founder-cell recruitment to organ primordia and suppresses the salicylic acid-independent immune response downstream of EDS1/PAD4.

The sucrose-trehalose 6-phosphate (Tre6P) nexus: specificity and mechanisms of sucrose signalling by Tre6P.

Neanderthal ancestry drives evolution of lipid catabolism in contemporary Europeans.

Diacylglycerol activates the light-dependent channel TRP in the photosensitive microvilli of Drosophila melanogaster photoreceptors.

Exceptional evolutionary divergence of human muscle and brain metabolomes parallels human cognitive and physical uniqueness.

Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species.

Uric acid accumulation in an Arabidopsis urate oxidase mutant impairs seedling establishment by blocking peroxisome maintenance.

MALDI imaging mass spectrometry: discrimination of pathophysiological regions in traumatized skeletal muscle by characteristic peptide signatures.

Sulphate fertilization ameliorates long-term aluminum toxicity symptoms in perennial ryegrass (Lolium perenne).

Lipid biosynthesis and protein concentration respond uniquely to phosphate supply during leaf development in highly phosphorus-efficient Hakea prostrata.

Consequences of induced brassinosteroid deficiency in Arabidopsis leaves.

Systems-wide analysis of acclimation responses to long-term heat stress and recovery in the photosynthetic model organism Chlamydomonas reinhardtii.

Liquid chromatography high-resolution mass spectrometry for fatty acid profiling.

Integration of transcriptomics and metabolomics data specifies the metabolic response of Chlamydomonas to rapamycin treatment.

FAX1, a novel membrane protein mediating plastid fatty acid export.

Global analysis of the role of autophagy in cellular metabolism and energy homeostasis in Arabidopsis seedlings under carbon starvation.

Organization and evolution of brain lipidome revealed by large-scale analysis of human, chimpanzee, macaque, and mouse tissues.

Identification and mode of inheritance of quantitative trait loci for secondary metabolite abundance in tomato.

Central role of FaGAMYB in the transition of the strawberry receptacle from development to ripening.

A Transcriptional and Metabolic Framework for Secondary Wall Formation in Arabidopsis.

Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana.

Protocol: a fast, comprehensive and reproducible one-step extraction method for the rapid preparation of polar and semi-polar metabolites, lipids, proteins, starch and cell wall polymers from a single sample.

Functional analysis of Brassica napus phloem protein and ribonucleoprotein complexes.

Lipidome determinants of maximal lifespan in mammals.

Changes in Lipidome Composition during Brain Development in Humans, Chimpanzees, and Macaque Monkeys.

Bioinformatic and expression analysis of the Brassica napus L. cyclophilins.

Alzheimer's brains show inter-related changes in RNA and lipid metabolism.

Dynamics of lipids and metabolites during the cell cycle of Chlamydomonas reinhardtii.

Regulatory-associated protein of TOR (RAPTOR) alters the hormonal and metabolic composition of Arabidopsis seeds, controlling seed morphology, viability and germination potential.

Dose-dependent interactions between two loci trigger altered shoot growth in BG-5 × Krotzenburg-0 (Kro-0) hybrids of Arabidopsis thaliana.

The target of rapamycin kinase affects biomass accumulation and cell cycle progression by altering carbon/nitrogen balance in synchronized Chlamydomonas reinhardtii cells.

Comprehensive Metabolomics Studies of Plant Developmental Senescence.

Comparative Metabolomics Approach Detects Stress-Specific Responses during Coral Bleaching in Soft Corals.

RAPTOR Controls Developmental Growth Transitions by Altering the Hormonal and Metabolic Balance.

Imaging Mass Spectrometry for Characterization of Atrial Fibrillation Subtypes.

Semi-targeted Lipidomics of Plant Acyl Lipids Using UPLC-HR-MS in Combination with a Data-Independent Acquisition Mode.

Lipidome Evolution in Mammalian Tissues.

Inhibition of TOR Represses Nutrient Consumption, Which Improves Greening after Extended Periods of Etiolation.

Target of Rapamycin Inhibition in Triggers de Novo Amino Acid Synthesis by Enhancing Nitrogen Assimilation.

Molecular signatures associated with increased freezing tolerance due to low temperature memory in Arabidopsis.

Chloroplast competition is controlled by lipid biosynthesis in evening primroses.

Limited nitrogen availability has cultivar-dependent effects on potato tuber yield and tuber quality traits.