Jana Seifert

Institute of Animal Science, University of Hohenheim

Research Area

Biology

Biography

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JoVE Journal Publications

Article Total : 1	Year
Publication title	2024

Other Publications

Article	Year
Sulfur-34S stable isotope labeling of amino acids for quantification (SULAQ34) of proteomic changes in Pseudomonas fluorescens during naphthalene degradation. Molecular & cellular proteomics : MCP\| PubMed ID: 23603340	2013
Bioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities. Proteomics\| PubMed ID: 23625762	2013
Insights from quantitative metaproteomics and protein-stable isotope probing into microbial ecology. The ISME journal\| PubMed ID: 23677009	2013
Microbial minorities modulate methane consumption through niche partitioning. The ISME journal\| PubMed ID: 23788331	2013
Proteome profile and proteogenomics of the organohalide-respiring bacterium Dehalococcoides mccartyi strain CBDB1 grown on hexachlorobenzene as electron acceptor. Journal of proteomics\| PubMed ID: 24374378	2014
Physiology of Geobacter metallireducens under excess and limitation of electron donors. Part I. Batch cultivation with excess of carbon sources. Systematic and applied microbiology\| PubMed ID: 24731775	2014
Physiology of Geobacter metallireducens under excess and limitation of electron donors. Part II. Mimicking environmental conditions during cultivation in retentostats. Systematic and applied microbiology\| PubMed ID: 24736031	2014
Metaproteogenomic analysis of a sulfate-reducing enrichment culture reveals genomic organization of key enzymes in the m-xylene degradation pathway and metabolic activity of proteobacteria. Systematic and applied microbiology\| PubMed ID: 25156802	2014
Subpopulation-proteomics reveal growth rate, but not cell cycling, as a major impact on protein composition in Pseudomonas putida KT2440. AMB Express\| PubMed ID: 25401072	2014
Anaerobic naphthalene degradation by sulfate-reducing Desulfobacteraceae from various anoxic aquifers. FEMS microbiology ecology\| PubMed ID: 25764566	2015
Catching the tip of the iceberg - evaluation of sample preparation protocols for metaproteomic studies of the rumen microbiota. Proteomics\| PubMed ID: 25765363	2015
Evaluation of DNA extraction kits and phylogenetic diversity of the porcine gastrointestinal tract based on Illumina sequencing of two hypervariable regions. MicrobiologyOpen\| PubMed ID: 26541370	2016
Enhancing metaproteomics--The value of models and defined environmental microbial systems. Proteomics\| PubMed ID: 26621789	2016
Pulsed (13)C2-Acetate Protein-SIP Unveils Epsilonproteobacteria as Dominant Acetate Utilizers in a Sulfate-Reducing Microbial Community Mineralizing Benzene. Microbial ecology\| PubMed ID: 26846217	2016
News in livestock research - use of Omics-technologies to study the microbiota in the gastrointestinal tract of farm animals. Computational and structural biotechnology journal\| PubMed ID: 26900430	2015
Intestinal Microbiota and Microbial Metabolites Are Changed in a Pig Model Fed a High-Fat/Low-Fiber or a Low-Fat/High-Fiber Diet. PloS one\| PubMed ID: 27100182	2016
Variations of Phosphorous Accessibility Causing Changes in Microbiome Functions in the Gastrointestinal Tract of Chickens. PloS one\| PubMed ID: 27760159	2016
Effect of and supplementation in diets with low- and high-protein content on ileal crude protein and amino acid digestibility and intestinal microbiota composition of growing pigs. Journal of animal science and biotechnology\| PubMed ID: 28469845	2017
A Structural and Functional Elucidation of the Rumen Microbiome Influenced by Various Diets and Microenvironments. Frontiers in microbiology\| PubMed ID: 28883813	2017
Dietary changes in nutritional studies shape the structural and functional composition of the pigs' fecal microbiome-from days to weeks. Microbiome\| PubMed ID: 29078812	2017
Effects of HIV, antiretroviral therapy and prebiotics on the active fraction of the gut microbiota. AIDS (London, England)\| PubMed ID: 29683848	2018
Current Perspectives of the Chicken Gastrointestinal Tract and Its Microbiome. Computational and structural biotechnology journal\| PubMed ID: 30026889	2018
Analysis of the Bacterial and Host Proteins along and across the Porcine Gastrointestinal Tract. Proteomes\| PubMed ID: 30634649	2019
Editorial for Special Issue: Metaproteomics. Proteomes\| PubMed ID: 30841491	2019
Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota. FEMS microbiology letters\| PubMed ID: 30915459	2021
Spatial separation of metabolic stages in a tube anaerobic baffled reactor: reactor performance and microbial community dynamics. Applied microbiology and biotechnology\| PubMed ID: 30915505	2019
Phytate degradation, intestinal microbiota, microbial metabolites and immune values are changed in growing pigs fed diets with varying calcium-phosphorus concentration and fermentable substr... Journal of animal physiology and animal nutrition\| PubMed ID: 30934140	2019
Occurrence and Function of the Na-Translocating NADH:Quinone Oxidoreductase in spp. Microorganisms\| PubMed ID: 31035603	2019
Anoxic cell rupture of Prevotella bryantii by high-pressure homogenization protects the Na-translocating NADH:quinone oxidoreductase from oxidative damage. Archives of microbiology\| PubMed ID: 31955240	2020
Phytate degradation cascade in pigs as affected by phytase supplementation and rapeseed cake inclusion in corn-soybean meal-based diets. Journal of animal science\| PubMed ID: 32060531	2020
Effects of a Dietary L-Carnitine Supplementation on Performance, Energy Metabolism and Recovery from Calving in Dairy Cows. Animals : an open access journal from MDPI\| PubMed ID: 32098123	2020
Phytate Degradation, Transcellular Mineral Transporters, and Mineral Utilization by Two Strains of Laying Hens as Affected by Dietary Phosphorus and Calcium. Animals : an open access journal from MDPI\| PubMed ID: 32987788	2020
Short-Chain Fatty Acids Modulate Metabolic Pathways and Membrane Lipids in B4. Proteomes\| PubMed ID: 33081314	2020
Phytate degradation, myo-inositol release, and utilization of phosphorus and calcium by two strains of laying hens in five production periods. Poultry science\| PubMed ID: 33248595	2020
Dietary l-carnitine Supplementation Modifies the Lipopolysaccharide-Induced Acute Phase Reaction in Dairy Cows. Animals : an open access journal from MDPI\| PubMed ID: 33435209	2021
Caeca Microbial Variation in Broiler Chickens as a Result of Dietary Combinations Using Two Cereal Types, Supplementation of Crude Protein and Sodium Butyrate. Frontiers in microbiology\| PubMed ID: 33505386	2020
Dynamic progression of the calf's microbiome and its influence on host health. Computational and structural biotechnology journal\| PubMed ID: 33613865	2021
Gut Microbial Composition and Predicted Functions Are Not Associated with Feather Pecking and Antagonistic Behavior in Laying Hens. Life (Basel, Switzerland)\| PubMed ID: 33809351	2021
Evolution of rumen and oral microbiota in calves is influenced by age and time of weaning. Animal microbiome\| PubMed ID: 33883031	2021
Characterization of Cecal Smooth Muscle Contraction in Laying Hens. Veterinary sciences\| PubMed ID: 34073160	2021
Metaproteomics Reveals Alteration of the Gut Microbiome in Weaned Piglets Due to the Ingestion of the Mycotoxins Deoxynivalenol and Zearalenone. Toxins\| PubMed ID: 34437454	2021
Na-Coupled Respiration and Reshaping of Extracellular Polysaccharide Layer Counteract Monensin-Induced Cation Permeability in B4. International journal of molecular sciences\| PubMed ID: 34638543	2021
Central Carbon Metabolism, Sodium-Motive Electron Transfer, and Ammonium Formation by the Vaginal Pathogen . International journal of molecular sciences\| PubMed ID: 34769356	2021
The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes. Microbiome\| PubMed ID: 34930457	2021
Factors Influencing Proteolysis and Protein Utilization in the Intestine of Pigs: A Review. Animals : an open access journal from MDPI\| PubMed ID: 34944326	2021
The active core microbiota of two high-yielding laying hen breeds fed with different levels of calcium and phosphorus. Frontiers in physiology\| PubMed ID: 36213242	2022
A shift towards succinate-producing Prevotella in the ruminal microbiome challenged with monensin. Proteomics\| PubMed ID: 36444514	2023
Cow's microbiome from antepartum to postpartum: A long-term study covering two physiological challenges. Frontiers in microbiology\| PubMed ID: 36466656	2022
Host metabolome and faecal microbiome shows potential interactions impacted by age and weaning times in calves. Animal microbiome\| PubMed ID: 36788596	2023
Dynamic Development of Viral and Bacterial Diversity during Grass Silage Preservation. Viruses\| PubMed ID: 37112930	2023
Microbiome-derived cobalamin and succinyl-CoA as biomarkers for improved screening of anal cancer. Nature medicine\| PubMed ID: 37464040	2023
Author Correction: Microbiome-derived cobalamin and succinyl-CoA as biomarkers for improved screening of anal cancer. Nature medicine\| PubMed ID: 37587221	2024
Host specific adaptations of to poultry. Current research in microbial sciences\| PubMed ID: 37727231	2023
Nitrogen and lysine utilization efficiencies, protein turnover, and blood urea concentrations in crossbred grower pigs at marginal dietary lysine concentration. Journal of animal science\| PubMed ID: 37773762	2023
"Get the best out of what comes in" - adaptation of the microbiota of chamois () to seasonal forage availability in the Bavarian Alps. Frontiers in microbiology\| PubMed ID: 37849922	2023
Microbiota and Nutrient Portraits of European Roe Deer (Capreolus capreolus) Rumen Contents in Characteristic Southern German Habitats. Microbial ecology\| PubMed ID: 37875737	2023
Functionality of the Na-translocating NADH:quinone oxidoreductase and quinol:fumarate reductase from Prevotella bryantii inferred from homology modeling. Archives of microbiology\| PubMed ID: 38127130	2023
Novel taxonomic and functional diversity of eight bacteria from the upper digestive tract of chicken. International journal of systematic and evolutionary microbiology\| PubMed ID: 38231200	2024
Genomic analyses of nitrogen utilization efficiency, its indicator trait blood urea nitrogen and the relationship to classical growth performance and feed efficiency traits in a Landrace × P... Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie\| PubMed ID: 38526066	2024
Microbial signatures and enterotype clusters in fattening pigs: implications for nitrogen utilization efficiency. Frontiers in microbiology\| PubMed ID: 38659980	2024