Institute of Animal Science,
HoLMiR - Hohenheim Center for Livestock Microbiome Research
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Sulfur-34S stable isotope labeling of amino acids for quantification (SULAQ34) of proteomic changes in Pseudomonas fluorescens during naphthalene degradation.
Molecular & cellular proteomics : MCP Aug, 2013 | Pubmed ID: 23603340
Bioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities.
Proteomics Oct, 2013 | Pubmed ID: 23625762
Insights from quantitative metaproteomics and protein-stable isotope probing into microbial ecology.
The ISME journal Oct, 2013 | Pubmed ID: 23677009
Microbial minorities modulate methane consumption through niche partitioning.
The ISME journal Nov, 2013 | Pubmed ID: 23788331
Proteome profile and proteogenomics of the organohalide-respiring bacterium Dehalococcoides mccartyi strain CBDB1 grown on hexachlorobenzene as electron acceptor.
Journal of proteomics Feb, 2014 | Pubmed ID: 24374378
Physiology of Geobacter metallireducens under excess and limitation of electron donors. Part I. Batch cultivation with excess of carbon sources.
Systematic and applied microbiology Jun, 2014 | Pubmed ID: 24731775
Physiology of Geobacter metallireducens under excess and limitation of electron donors. Part II. Mimicking environmental conditions during cultivation in retentostats.
Systematic and applied microbiology Jun, 2014 | Pubmed ID: 24736031
Metaproteogenomic analysis of a sulfate-reducing enrichment culture reveals genomic organization of key enzymes in the m-xylene degradation pathway and metabolic activity of proteobacteria.
Systematic and applied microbiology Oct, 2014 | Pubmed ID: 25156802
Subpopulation-proteomics reveal growth rate, but not cell cycling, as a major impact on protein composition in Pseudomonas putida KT2440.
AMB Express , 2014 | Pubmed ID: 25401072
Anaerobic naphthalene degradation by sulfate-reducing Desulfobacteraceae from various anoxic aquifers.
FEMS microbiology ecology Mar, 2015 | Pubmed ID: 25764566
Catching the tip of the iceberg - evaluation of sample preparation protocols for metaproteomic studies of the rumen microbiota.
Proteomics Oct, 2015 | Pubmed ID: 25765363
Evaluation of DNA extraction kits and phylogenetic diversity of the porcine gastrointestinal tract based on Illumina sequencing of two hypervariable regions.
MicrobiologyOpen Feb, 2016 | Pubmed ID: 26541370
Enhancing metaproteomics--The value of models and defined environmental microbial systems.
Proteomics Mar, 2016 | Pubmed ID: 26621789
Pulsed (13)C2-Acetate Protein-SIP Unveils Epsilonproteobacteria as Dominant Acetate Utilizers in a Sulfate-Reducing Microbial Community Mineralizing Benzene.
Microbial ecology May, 2016 | Pubmed ID: 26846217
News in livestock research - use of Omics-technologies to study the microbiota in the gastrointestinal tract of farm animals.
Computational and structural biotechnology journal , 2015 | Pubmed ID: 26900430
Intestinal Microbiota and Microbial Metabolites Are Changed in a Pig Model Fed a High-Fat/Low-Fiber or a Low-Fat/High-Fiber Diet.
PloS one , 2016 | Pubmed ID: 27100182
Variations of Phosphorous Accessibility Causing Changes in Microbiome Functions in the Gastrointestinal Tract of Chickens.
PloS one , 2016 | Pubmed ID: 27760159
Effect of and supplementation in diets with low- and high-protein content on ileal crude protein and amino acid digestibility and intestinal microbiota composition of growing pigs.
Journal of animal science and biotechnology , 2017 | Pubmed ID: 28469845
A Structural and Functional Elucidation of the Rumen Microbiome Influenced by Various Diets and Microenvironments.
Frontiers in microbiology , 2017 | Pubmed ID: 28883813
Dietary changes in nutritional studies shape the structural and functional composition of the pigs' fecal microbiome-from days to weeks.
Microbiome Oct, 2017 | Pubmed ID: 29078812
Effects of HIV, antiretroviral therapy and prebiotics on the active fraction of the gut microbiota.
AIDS (London, England) Jun, 2018 | Pubmed ID: 29683848
Current Perspectives of the Chicken Gastrointestinal Tract and Its Microbiome.
Computational and structural biotechnology journal , 2018 | Pubmed ID: 30026889
Analysis of the Bacterial and Host Proteins along and across the Porcine Gastrointestinal Tract.
Proteomes Jan, 2019 | Pubmed ID: 30634649
Editorial for Special Issue: Metaproteomics.
Proteomes Mar, 2019 | Pubmed ID: 30841491
Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota.
FEMS microbiology letters May, 2021 | Pubmed ID: 30915459
Spatial separation of metabolic stages in a tube anaerobic baffled reactor: reactor performance and microbial community dynamics.
Applied microbiology and biotechnology May, 2019 | Pubmed ID: 30915505
Phytate degradation, intestinal microbiota, microbial metabolites and immune values are changed in growing pigs fed diets with varying calcium-phosphorus concentration and fermentable substrates.
Journal of animal physiology and animal nutrition Jul, 2019 | Pubmed ID: 30934140
Occurrence and Function of the Na-Translocating NADH:Quinone Oxidoreductase in spp.
Microorganisms Apr, 2019 | Pubmed ID: 31035603
Anoxic cell rupture of Prevotella bryantii by high-pressure homogenization protects the Na-translocating NADH:quinone oxidoreductase from oxidative damage.
Archives of microbiology Jul, 2020 | Pubmed ID: 31955240
Phytate degradation cascade in pigs as affected by phytase supplementation and rapeseed cake inclusion in corn-soybean meal-based diets.
Journal of animal science Mar, 2020 | Pubmed ID: 32060531
Effects of a Dietary L-Carnitine Supplementation on Performance, Energy Metabolism and Recovery from Calving in Dairy Cows.
Animals : an open access journal from MDPI Feb, 2020 | Pubmed ID: 32098123
Phytate Degradation, Transcellular Mineral Transporters, and Mineral Utilization by Two Strains of Laying Hens as Affected by Dietary Phosphorus and Calcium.
Animals : an open access journal from MDPI Sep, 2020 | Pubmed ID: 32987788
Short-Chain Fatty Acids Modulate Metabolic Pathways and Membrane Lipids in B4.
Proteomes Oct, 2020 | Pubmed ID: 33081314
Phytate degradation, myo-inositol release, and utilization of phosphorus and calcium by two strains of laying hens in five production periods.
Poultry science Dec, 2020 | Pubmed ID: 33248595
Dietary l-carnitine Supplementation Modifies the Lipopolysaccharide-Induced Acute Phase Reaction in Dairy Cows.
Animals : an open access journal from MDPI Jan, 2021 | Pubmed ID: 33435209
Caeca Microbial Variation in Broiler Chickens as a Result of Dietary Combinations Using Two Cereal Types, Supplementation of Crude Protein and Sodium Butyrate.
Frontiers in microbiology , 2020 | Pubmed ID: 33505386
Dynamic progression of the calf's microbiome and its influence on host health.
Computational and structural biotechnology journal , 2021 | Pubmed ID: 33613865
Gut Microbial Composition and Predicted Functions Are Not Associated with Feather Pecking and Antagonistic Behavior in Laying Hens.
Life (Basel, Switzerland) Mar, 2021 | Pubmed ID: 33809351
Evolution of rumen and oral microbiota in calves is influenced by age and time of weaning.
Animal microbiome Apr, 2021 | Pubmed ID: 33883031
Characterization of Cecal Smooth Muscle Contraction in Laying Hens.
Veterinary sciences May, 2021 | Pubmed ID: 34073160
Metaproteomics Reveals Alteration of the Gut Microbiome in Weaned Piglets Due to the Ingestion of the Mycotoxins Deoxynivalenol and Zearalenone.
Toxins Aug, 2021 | Pubmed ID: 34437454
Na-Coupled Respiration and Reshaping of Extracellular Polysaccharide Layer Counteract Monensin-Induced Cation Permeability in B4.
International journal of molecular sciences Sep, 2021 | Pubmed ID: 34638543
Central Carbon Metabolism, Sodium-Motive Electron Transfer, and Ammonium Formation by the Vaginal Pathogen .
International journal of molecular sciences Nov, 2021 | Pubmed ID: 34769356
The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes.
Microbiome Dec, 2021 | Pubmed ID: 34930457
Factors Influencing Proteolysis and Protein Utilization in the Intestine of Pigs: A Review.
Animals : an open access journal from MDPI Dec, 2021 | Pubmed ID: 34944326
The active core microbiota of two high-yielding laying hen breeds fed with different levels of calcium and phosphorus.
Frontiers in physiology , 2022 | Pubmed ID: 36213242
A shift towards succinate-producing Prevotella in the ruminal microbiome challenged with monensin.
Proteomics Nov, 2023 | Pubmed ID: 36444514
Cow's microbiome from antepartum to postpartum: A long-term study covering two physiological challenges.
Frontiers in microbiology , 2022 | Pubmed ID: 36466656
Host metabolome and faecal microbiome shows potential interactions impacted by age and weaning times in calves.
Animal microbiome Feb, 2023 | Pubmed ID: 36788596
Dynamic Development of Viral and Bacterial Diversity during Grass Silage Preservation.
Viruses Apr, 2023 | Pubmed ID: 37112930
Microbiome-derived cobalamin and succinyl-CoA as biomarkers for improved screening of anal cancer.
Nature medicine Jul, 2023 | Pubmed ID: 37464040
Author Correction: Microbiome-derived cobalamin and succinyl-CoA as biomarkers for improved screening of anal cancer.
Nature medicine Jan, 2024 | Pubmed ID: 37587221
Host specific adaptations of to poultry.
Current research in microbial sciences , 2023 | Pubmed ID: 37727231
Nitrogen and lysine utilization efficiencies, protein turnover, and blood urea concentrations in crossbred grower pigs at marginal dietary lysine concentration.
Journal of animal science Jan, 2023 | Pubmed ID: 37773762
"Get the best out of what comes in" - adaptation of the microbiota of chamois () to seasonal forage availability in the Bavarian Alps.
Frontiers in microbiology , 2023 | Pubmed ID: 37849922
Microbiota and Nutrient Portraits of European Roe Deer (Capreolus capreolus) Rumen Contents in Characteristic Southern German Habitats.
Microbial ecology Nov, 2023 | Pubmed ID: 37875737
Functionality of the Na-translocating NADH:quinone oxidoreductase and quinol:fumarate reductase from Prevotella bryantii inferred from homology modeling.
Archives of microbiology Dec, 2023 | Pubmed ID: 38127130
Novel taxonomic and functional diversity of eight bacteria from the upper digestive tract of chicken.
International journal of systematic and evolutionary microbiology Jan, 2024 | Pubmed ID: 38231200
Genomic analyses of nitrogen utilization efficiency, its indicator trait blood urea nitrogen and the relationship to classical growth performance and feed efficiency traits in a Landrace × Piétrain crossbred population.
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie Mar, 2024 | Pubmed ID: 38526066
Microbial signatures and enterotype clusters in fattening pigs: implications for nitrogen utilization efficiency.
Frontiers in microbiology , 2024 | Pubmed ID: 38659980
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