Département de Biologie,
Institut de biologie intégrative et des systémes & PROTEO,
Département de Biologie, Institut de biologie intégrative et des systémes & PROTEO
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Alternative life histories shape brain gene expression profiles in males of the same population.
Proceedings. Biological sciences / The Royal Society Aug, 2005 | Pubmed ID: 16087419
Compensatory cis-trans evolution and the dysregulation of gene expression in interspecific hybrids of Drosophila.
Genetics Dec, 2005 | Pubmed ID: 16143608
Large-scale genetic variation of the symbiosis-required megaplasmid pSymA revealed by comparative genomic analysis of Sinorhizobium meliloti natural strains.
BMC genomics , 2005 | Pubmed ID: 16283928
Genome-wide scan reveals that genetic variation for transcriptional plasticity in yeast is biased towards multi-copy and dispensable genes.
Gene Feb, 2006 | Pubmed ID: 16427747
Ecological and evolutionary genomics of Saccharomyces cerevisiae.
Molecular ecology Mar, 2006 | Pubmed ID: 16499686
Systems-level analysis and evolution of the phototransduction network in Drosophila.
Proceedings of the National Academy of Sciences of the United States of America Feb, 2007 | Pubmed ID: 17360639
Genetic properties influencing the evolvability of gene expression.
Science (New York, N.Y.) Jul, 2007 | Pubmed ID: 17525304
Indel arrays: an affordable alternative for genotyping.
The Plant journal : for cell and molecular biology Aug, 2007 | Pubmed ID: 17645438
Ecological annotation of genes and genomes through ecological genomics.
Molecular ecology Nov, 2007 | Pubmed ID: 17883391
Cascading transcriptional effects of a naturally occurring frameshift mutation in Saccharomyces cerevisiae.
Molecular ecology Jun, 2008 | Pubmed ID: 18422925
An in vivo map of the yeast protein interactome.
Science (New York, N.Y.) Jun, 2008 | Pubmed ID: 18467557
A genome-wide view of the spectrum of spontaneous mutations in yeast.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2008 | Pubmed ID: 18583475
Chromatin- and transcription-related factors repress transcription from within coding regions throughout the Saccharomyces cerevisiae genome.
PLoS biology Nov, 2008 | Pubmed ID: 18998772
Systems biology spins off a new model for the study of canalization.
Trends in ecology & evolution Feb, 2009 | Pubmed ID: 19100652
How perfect can protein interactomes be?
Science signaling , 2009 | Pubmed ID: 19261595
Weak functional constraints on phosphoproteomes.
Trends in genetics : TIG May, 2009 | Pubmed ID: 19349092
Key considerations for measuring allelic expression on a genomic scale using high-throughput sequencing.
Molecular ecology Mar, 2010 | Pubmed ID: 20331781
Cell signaling. Signaling through cooperation.
Science (New York, N.Y.) May, 2010 | Pubmed ID: 20489011
Moving from transcriptional to phospho-evolution: generalizing regulatory evolution?
Trends in genetics : TIG Nov, 2010 | Pubmed ID: 20817339
Molecular characterization of the evolution of phagosomes.
Molecular systems biology Oct, 2010 | Pubmed ID: 20959821
Gene network architecture as a canvas for the interpretation of ecological genomics investigations.
Molecular ecology Dec, 2010 | Pubmed ID: 21091660
Chromatin regulators shape the genotype-phenotype map.
Molecular systems biology Nov, 2010 | Pubmed ID: 21119628
Phosphorylation network rewiring by gene duplication.
Molecular systems biology , 2011 | Pubmed ID: 21734643
Cell biology. A cellular roadmap for the plant kingdom.
Science (New York, N.Y.) Jul, 2011 | Pubmed ID: 21798921
Characterization of spindle checkpoint kinase Mps1 reveals domain with functional and structural similarities to tetratricopeptide repeat motifs of Bub1 and BubR1 checkpoint kinases.
The Journal of biological chemistry Feb, 2012 | Pubmed ID: 22187426
Where do phosphosites come from and where do they go after gene duplication?
International journal of evolutionary biology , 2012 | Pubmed ID: 22779031
The genotype-phenotype maps of systems biology and quantitative genetics: distinct and complementary.
Advances in experimental medicine and biology , 2012 | Pubmed ID: 22821467
Protein abundance is key to distinguish promiscuous from functional phosphorylation based on evolutionary information.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences Sep, 2012 | Pubmed ID: 22889910
What is needed for next-generation ecological and evolutionary genomics?
Trends in ecology & evolution Dec, 2012 | Pubmed ID: 22902072
Proteomic characterization of phagosomal membrane microdomains during phagolysosome biogenesis and evolution.
Molecular & cellular proteomics : MCP Nov, 2012 | Pubmed ID: 22915823
Transcriptional divergence plays a role in the rewiring of protein interaction networks after gene duplication.
Journal of proteomics Apr, 2013 | Pubmed ID: 23063722
qPCA: a scalable assay to measure the perturbation of protein-protein interactions in living cells.
Molecular bioSystems Jan, 2013 | Pubmed ID: 23099892
Are long-lived trees poised for evolutionary change? Single locus effects in the evolution of gene expression networks in spruce.
Molecular ecology May, 2013 | Pubmed ID: 23294325
Evidence for the robustness of protein complexes to inter-species hybridization.
PLoS genetics , 2012 | Pubmed ID: 23300466
Integrative avenues for exploring the dynamics and evolution of protein interaction networks.
Current opinion in biotechnology Aug, 2013 | Pubmed ID: 23571097
A systematic approach for the genetic dissection of protein complexes in living cells.
Cell reports Jun, 2013 | Pubmed ID: 23746448
Exploring the northern limit of the distribution of Saccharomyces cerevisiae and Saccharomyces paradoxus in North America.
FEMS yeast research Mar, 2014 | Pubmed ID: 24119009
Modulation of the yeast protein interactome in response to DNA damage.
Journal of proteomics Apr, 2014 | Pubmed ID: 24262151
Extracting insight from noisy cellular networks.
Cell Nov, 2013 | Pubmed ID: 24267884
Recent advances in ecological genomics: from phenotypic plasticity to convergent and adaptive evolution and speciation.
Advances in experimental medicine and biology , 2014 | Pubmed ID: 24277292
Molecular mechanisms of paralogous compensation and the robustness of cellular networks.
Journal of experimental zoology. Part B, Molecular and developmental evolution Nov, 2014 | Pubmed ID: 24376223
Local climatic adaptation in a widespread microorganism.
Proceedings. Biological sciences / The Royal Society Feb, 2014 | Pubmed ID: 24403328
Functional divergence and evolutionary turnover in mammalian phosphoproteomes.
PLoS genetics Jan, 2014 | Pubmed ID: 24465218
The calcineurin signaling network evolves via conserved kinase-phosphatase modules that transcend substrate identity.
Molecular cell Aug, 2014 | Pubmed ID: 24930733
Chromosomal variation segregates within incipient species and correlates with reproductive isolation.
Molecular ecology Sep, 2014 | Pubmed ID: 25039979
Turnover of protein phosphorylation evolving under stabilizing selection.
Frontiers in genetics , 2014 | Pubmed ID: 25101120
The yeast galactose network as a quantitative model for cellular memory.
Molecular bioSystems Jan, 2015 | Pubmed ID: 25328105
Detecting functional divergence after gene duplication through evolutionary changes in posttranslational regulatory sequences.
PLoS computational biology Dec, 2014 | Pubmed ID: 25474245
The last enzyme of the de novo purine synthesis pathway ATIC plays a central role in insulin signalling and the Golgi/endosomes protein network.
Molecular & cellular proteomics : MCP Feb, 2015 | Pubmed ID: 25687571
Metabolic variation in natural populations of wild yeast.
Ecology and evolution Feb, 2015 | Pubmed ID: 25691993
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