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Laboratory Program
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HIV coreceptor phenotyping in the clinical setting.
AIDS reviews Jul-Sep, 2008 | Pubmed ID: 18820716
HLA-associated immune escape pathways in HIV-1 subtype B Gag, Pol and Nef proteins.
PloS one , 2009 | Pubmed ID: 19690614
Phylogenetic analysis of population-based and deep sequencing data to identify coevolving sites in the nef gene of HIV-1.
Molecular biology and evolution Apr, 2010 | Pubmed ID: 19955476
Improved detection of CXCR4-using HIV by V3 genotyping: application of population-based and "deep" sequencing to plasma RNA and proviral DNA.
Journal of acquired immune deficiency syndromes (1999) Aug, 2010 | Pubmed ID: 20512044
Deep sequencing to infer HIV-1 co-receptor usage: application to three clinical trials of maraviroc in treatment-experienced patients.
The Journal of infectious diseases Jan, 2011 | Pubmed ID: 21288824
"Dynamic range" of inferred phenotypic HIV drug resistance values in clinical practice.
PloS one , 2011 | Pubmed ID: 21390218
Mutations in gp41 are correlated with coreceptor tropism but do not improve prediction methods substantially.
Antiviral therapy , 2011 | Pubmed ID: 21555814
Detection of inferred CCR5- and CXCR4-using HIV-1 variants and evolutionary intermediates using ultra-deep pyrosequencing.
PLoS pathogens Jun, 2011 | Pubmed ID: 21731496
Deep V3 sequencing for HIV type 1 tropism in treatment-naive patients: a reanalysis of the MERIT trial of maraviroc.
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America Oct, 2011 | Pubmed ID: 21890778
BC Centre for Excellence in HIV/AIDS
Rachel A. McGovern1,
P. Richard Harrigan1,
Luke C. Swenson1
1Laboratory Program, BC Centre for Excellence in HIV/AIDS
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