Mitchel J. Doktycz

Comparative analyses of the secondary structures of synthetic and intracellular yeast MFA2 mRNAs.

Fingerprinting of prokaryotic 16S rRNA genes using oligodeoxyribonucleotide microarrays and virtual hybridization.

Genomes to Life "Center for Molecular and Cellular Systems": a research program for identification and characterization of protein complexes.

AFM imaging of bacteria in liquid media immobilized on gelatin coated mica surfaces.

Optimized beadmilling of tissues for high-throughput RNA production and microarray-based analyses.

Evaluation of a surface-sampling probe electrospray mass spectrometry system for the analysis of surface-deposited and affinity-captured proteins.

The near-naked hairless (Hr(N)) mutation disrupts hair formation but is not due to a mutation in the Hairless coding region.

Nano-enabled synthetic biology.

Controlling the Dimensions of Carbon Nanofiber Structures through the Electropolymerization of Pyrrole.

A general system for studying protein-protein interactions in Gram-negative bacteria.

Actuatable membranes based on polypyrrole-coated vertically aligned carbon nanofibers.

Positional control of catalyst nanoparticles for the synthesis of high density carbon nanofiber arrays.

Effects of ultramicroelectrode dimensions on the electropolymerization of polypyrrole.

An in vivo imaging-based assay for detecting protein interactions over a wide range of binding affinities.

Development and fabrication of nanoporous silicon-based bioreactors within a microfluidic chip.

Silver nanocrystallites: biofabrication using Shewanella oneidensis, and an evaluation of their comparative toxicity on gram-negative and gram-positive bacteria.

Surface charge- and space-dependent transport of proteins in crowded environments of nanotailored posts.

Atomic force microscopy of biological samples.

Effects of engineered cerium oxide nanoparticles on bacterial growth and viability.

Characterization of cell surface and extracellular matrix remodeling of Azospirillum brasilense chemotaxis-like 1 signal transduction pathway mutants by atomic force microscopy.

Biofabrication of discrete spherical gold nanoparticles using the metal-reducing bacterium Shewanella oneidensis.

Cell Free Translation in Engineered Picoliter Volume Containers.

Effects of sub-minimum inhibitory concentrations of ciprofloxacin on enteroaggregative Escherichia coli and the role of the surface protein dispersin.

Model for biological communication in a nanofabricated cell-mimic driven by stochastic resonance.

Distinct microbial communities within the endosphere and rhizosphere of Populus deltoides roots across contrasting soil types.

Monodispersed biocompatible silver sulfide nanoparticles: facile extracellular biosynthesis using the γ-proteobacterium, Shewanella oneidensis.

The chemotaxis-like Che1 pathway has an indirect role in adhesive cell properties of Azospirillum brasilense.

Enzyme reactions in nanoporous, picoliter volume containers.

Expression optimization and synthetic gene networks in cell-free systems.

Cytotoxicity induced by engineered silver nanocrystallites is dependent on surface coatings and cell types.

Pseudomonas fluorescens induces strain-dependent and strain-independent host plant responses in defense networks, primary metabolism, photosynthesis, and fitness.

Draft genome sequence of Rhizobium sp. strain PDO1-076, a bacterium isolated from Populus deltoides.

Twenty-one genome sequences from Pseudomonas species and 19 genome sequences from diverse bacteria isolated from the rhizosphere and endosphere of Populus deltoides.

Relating nanomaterial properties and microbial toxicity.

Layer-by-layer templated assembly of silica at the nanoscale.

Enteroaggregative Escherichia coli: surface protein dispersin increases bacterial uptake of ciprofloxacin.

Multi-input regulation and logic with T7 promoters in cells and cell-free systems.

Monodisperse alginate microgel formation in a three-dimensional microfluidic droplet generator.

Evaluation and validation of de novo and hybrid assembly techniques to derive high-quality genome sequences.

Nanostructured silicon membranes for control of molecular transport.

Microstructured block copolymer surfaces for control of microbe adhesion and aggregation.

New surface radiolabeling schemes of super paramagnetic iron oxide nanoparticles (SPIONs) for biodistribution studies.

Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment.

Fabrication of nanoporous membranes for tuning microbial interactions and biochemical reactions.

Microstencils to generate defined, multi-species patterns of bacteria.

Toward Microfluidic Reactors for Cell-Free Protein Synthesis at the Point-of-Care.

A Carotenoid-Deficient Mutant in Pantoea sp. YR343, a Bacteria Isolated from the Rhizosphere of Populus deltoides, Is Defective in Root Colonization.

Stochastic Assembly of Bacteria in Microwell Arrays Reveals the Importance of Confinement in Community Development.

Two Poplar-Associated Bacterial Isolates Induce Additive Favorable Responses in a Constructed Plant-Microbiome System.

While-you-wait proteins? Producing biomolecules at the point of need.

Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis.

β-(1,3)-Glucan Unmasking in Some Candida albicans Mutants Correlates with Increases in Cell Wall Surface Roughness and Decreases in Cell Wall Elasticity.

Automated Interpretation and Extraction of Topographic Information from Time of Flight Secondary Ion Mass Spectrometry Data.

Abiotic Stresses Shift Belowground -Associated Bacteria Toward a Core Stress Microbiome.

Nano-Enabled Approaches to Chemical Imaging in Biosystems.

Elucidating Duramycin's Bacterial Selectivity and Mode of Action on the Bacterial Cell Envelope.

Exploration of the Biosynthetic Potential of the Microbiome.

Itaconic acid degradation in : the role of unexpected bioconversion pathways.

Loss of carotenoids from membranes of Pantoea sp. YR343 results in altered lipid composition and changes in membrane biophysical properties.

Increasing access to microfluidics for studying fungi and other branched biological structures.

Pore-scale hydrodynamics influence the spatial evolution of bacterial biofilms in a microfluidic porous network.

Label-free time- and space-resolved exometabolite sampling of growing plant roots through nanoporous interfaces.

Microfluidics and Metabolomics Reveal Symbiotic Bacterial-Fungal Interactions Between and Include Metabolite Exchange.

Computationally Guided Discovery and Experimental Validation of Indole-3-acetic Acid Synthesis Pathways.

A carotenoid-deficient mutant of the plant-associated microbe Pantoea sp. YR343 displays an altered membrane proteome.

Elucidating the potential of crude cell extracts for producing pyruvate from glucose.

Targeted Growth Medium Dropouts Promote Aromatic Compound Synthesis in Crude Cell-Free Systems.

Machine learning-based prediction of enzyme substrate scope: Application to bacterial nitrilases.

A lysate proteome engineering strategy for enhancing cell-free metabolite production.

Formation, characterization and modeling of emergent synthetic microbial communities.

Advances and perspectives in discovery and functional analysis of small secreted proteins in plants.