Center for Personalized Medicine,
Department of Pathology and Laboratory Medicine
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MSeqDR: A Centralized Knowledge Repository and Bioinformatics Web Resource to Facilitate Genomic Investigations in Mitochondrial Disease.
Human mutation 06, 2016 | Pubmed ID: 26919060
A novel HSD17B10 mutation impairing the activities of the mitochondrial RNase P complex causes X-linked intractable epilepsy and neurodevelopmental regression.
RNA biology May, 2016 | Pubmed ID: 26950678
From case studies to community knowledge base: MSeqDR provides a platform for the curation and genomic analysis of mitochondrial diseases.
Cold Spring Harbor molecular case studies May, 2016 | Pubmed ID: 27148591
Copy-number variation is an important contributor to the genetic causality of inherited retinal degenerations.
Genetics in medicine : official journal of the American College of Medical Genetics 06, 2017 | Pubmed ID: 27735924
Inherited germline ATRX mutation in two brothers with ATR-X syndrome and osteosarcoma.
American journal of medical genetics. Part A May, 2017 | Pubmed ID: 28371217
Identification of RUNX1 as a Mediator of Aberrant Retinal Angiogenesis.
Diabetes 07, 2017 | Pubmed ID: 28400392
Whole exome sequencing identification of novel candidate genes in patients with proliferative diabetic retinopathy.
Vision research 10, 2017 | Pubmed ID: 28431867
On variants and disease-causing mutations: Case studies of a SEMA4A variant identified in inherited blindness.
Ophthalmic genetics Jan-Feb, 2018 | Pubmed ID: 28805479
Clinical utility of the low-density Infinium QC genotyping Array in a genomics-based diagnostics laboratory.
BMC medical genomics 10, 2017 | Pubmed ID: 28985730
MSeqDR mvTool: A mitochondrial DNA Web and API resource for comprehensive variant annotation, universal nomenclature collation, and reference genome conversion.
Human mutation 06, 2018 | Pubmed ID: 29539190
USMG5 Ashkenazi Jewish founder mutation impairs mitochondrial complex V dimerization and ATP synthesis.
Human molecular genetics 10, 2018 | Pubmed ID: 29917077
Identification of a novel pathogenic missense mutation in using whole exome sequencing: a case report.
The British journal of ophthalmology 06, 2019 | Pubmed ID: 30030392
OncoKids: A Comprehensive Next-Generation Sequencing Panel for Pediatric Malignancies.
The Journal of molecular diagnostics : JMD 11, 2018 | Pubmed ID: 30138724
Landscape of Germline and Somatic Mitochondrial DNA Mutations in Pediatric Malignancies.
Cancer research 04, 2019 | Pubmed ID: 30709931
A semiautomated whole-exome sequencing workflow leads to increased diagnostic yield and identification of novel candidate variants.
Cold Spring Harbor molecular case studies 04, 2019 | Pubmed ID: 30755392
Utility of In Vitro Mutagenesis of RPE65 Protein for Verification of Mutational Pathogenicity Before Gene Therapy.
JAMA ophthalmology 12, 2019 | Pubmed ID: 31580392
Resistance to autosomal dominant Alzheimer's disease in an APOE3 Christchurch homozygote: a case report.
Nature medicine 11, 2019 | Pubmed ID: 31686034
Detection of mitochondrial DNA variants at low level heteroplasmy in pediatric CNS and extra-CNS solid tumors with three different enrichment methods.
Mitochondrion 03, 2020 | Pubmed ID: 31972374
Variability in retinoblastoma genome stability is driven by age and not heritability.
Genes, chromosomes & cancer , | Pubmed ID: 32390242
Clinical Bioinformatics in Precise Diagnosis of Mitochondrial Disease.
Clinics in laboratory medicine 06, 2020 | Pubmed ID: 32439066
Simultaneous identification of clinically relevant mutations and copy number alterations in aqueous humor of retinoblastoma eyes.
Ophthalmic genetics , | Pubmed ID: 32799607
Specifications of the ACMG/AMP standards and guidelines for mitochondrial DNA variant interpretation.
Human mutation 12, 2020 | Pubmed ID: 32906214
Comprehensive Genome Analysis of 6,000 USA SARS-CoV-2 Isolates Reveals Haplotype Signatures and Localized Transmission Patterns by State and by Country.
Frontiers in microbiology , 2020 | Pubmed ID: 33013809
Early pandemic molecular diversity of SARS-CoV-2 in children.
medRxiv : the preprint server for health sciences Feb, 2021 | Pubmed ID: 33619507
Persistent SARS-CoV-2 infection and increasing viral variants in children and young adults with impaired humoral immunity.
medRxiv : the preprint server for health sciences Mar, 2021 | Pubmed ID: 33688673
Establishing the Clinical Utility of ctDNA Analysis for Diagnosis, Prognosis, and Treatment Monitoring of Retinoblastoma: The Aqueous Humor Liquid Biopsy.
Cancers Mar, 2021 | Pubmed ID: 33805776
Utility of viral whole-genome sequencing for institutional infection surveillance during the coronavirus disease 2019 (COVID-19) pandemic.
Infection control and hospital epidemiology Apr, 2021 | Pubmed ID: 33866984
Emerging variants of concern in SARS-CoV-2 membrane protein: a highly conserved target with potential pathological and therapeutic implications.
Emerging microbes & infections Dec, 2021 | Pubmed ID: 33896413
Increased viral variants in children and young adults with impaired humoral immunity and persistent SARS-CoV-2 infection: A consecutive case series.
EBioMedicine May, 2021 | Pubmed ID: 33915337
High Prevalence of SARS-CoV-2 Genetic Variation and D614G Mutation in Pediatric Patients With COVID-19.
Open forum infectious diseases Jun, 2021 | Pubmed ID: 34095334
Inter-eye genomic heterogeneity in bilateral retinoblastoma via aqueous humor liquid biopsy.
NPJ precision oncology Jul, 2021 | Pubmed ID: 34316014
The spectrum of mitochondrial DNA (mtDNA) mutations in pediatric CNS tumors.
Neuro-oncology advances Jan-Dec, 2021 | Pubmed ID: 34337412
Mary E. Kim1,2,
Liya Xu1,2,3,11,
Rishvanth K. Prabakar4,
Lishuang Shen5,
Chen-Ching Peng1,3,
Peter Kuhn3,6,7,8,
Xiaowu Gai5,9,
James Hicks3,6,10,
Jesse L. Berry1,2,6,11
1The Vision Center, Children’s Hospital Los Angeles,
2USC Roski Eye Institute, Keck School of Medicine of the University of Southern California,
3Department of Biological Sciences, Dornsife College of Letters, Arts, and Sciences, University of Southern California,
4Department of Molecular and Computational Biology, University of Southern California,
5Center for Personalized Medicine, Department of Pathology and Laboratory Medicine, Children’s Hospital Los Angeles,
6Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California,
7Department of Aerospace and Mechanical Engineering, Viterbi School of Engineering, University of Southern California,
8Department of Biomedical Engineering, Viterbi School of Engineering, University of Southern California,
9Department of Pathology and Laboratory Medicine, Keck School of Medicine of USC,
10Department of Biochemistry and Molecular Medicine, Keck School of Medicine, University of Southern California,
11The Saban Research Institute, Children’s Hospital Los Angeles
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