Subina Mehta
Department of Biochemistry,
Molecular Biology and Biophysics,
Department of Biochemistry, Molecular Biology and Biophysics
University of Minnesota
Subina Mehta has not added Biography.
If you are Subina Mehta and would like to personalize this page please email our Author Liaison for assistance.
Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework.
Proteomes Jan, 2018 | Pubmed ID: 29385081
Bridging the Chromosome-centric and Biology/Disease-driven Human Proteome Projects: Accessible and Automated Tools for Interpreting the Biological and Pathological Impact of Protein Sequence Variants Detected via Proteogenomics.
Journal of proteome research Dec, 2018 | Pubmed ID: 30130115
Update on the moFF Algorithm for Label-Free Quantitative Proteomics.
Journal of proteome research Feb, 2019 | Pubmed ID: 30511867
Improve your Galaxy text life: The Query Tabular Tool.
F1000Research , 2018 | Pubmed ID: 30519459
QuanTP: A Software Resource for Quantitative Proteo-Transcriptomic Comparative Data Analysis and Informatics.
Journal of proteome research Feb, 2019 | Pubmed ID: 30582332
The Galaxy Platform for Reproducible Affinity Proteomic Mass Spectrometry Data Analysis.
Methods in molecular biology (Clifton, N.J.) , 2019 | Pubmed ID: 30980333
metaQuantome: An Integrated, Quantitative Metaproteomics Approach Reveals Connections Between Taxonomy and Protein Function in Complex Microbiomes.
Molecular & cellular proteomics : MCP Aug, 2019 | Pubmed ID: 31235611
Multi-omics Visualization Platform: An extensible Galaxy plug-in for multi-omics data visualization and exploration.
GigaScience Apr, 2020 | Pubmed ID: 32236523
A Sectioning and Database Enrichment Approach for Improved Peptide Spectrum Matching in Large, Genome-Guided Protein Sequence Databases.
Journal of proteome research Jul, 2020 | Pubmed ID: 32396365
Precursor Intensity-Based Label-Free Quantification Software Tools for Proteomic and Multi-Omic Analysis within the Galaxy Platform.
Proteomes Jul, 2020 | Pubmed ID: 32650610
Survey of metaproteomics software tools for functional microbiome analysis.
PloS one , 2020 | Pubmed ID: 33170893
Metaproteomics Analysis of SARS-CoV-2-Infected Patient Samples Reveals Presence of Potential Coinfecting Microorganisms.
Journal of proteome research Feb, 2021 | Pubmed ID: 33393790
Updates on metaQuantome Software for Quantitative Metaproteomics.
Journal of proteome research Apr, 2021 | Pubmed ID: 33683127
A rigorous evaluation of optimal peptide targets for MS-based clinical diagnostics of Coronavirus Disease 2019 (COVID-19).
medRxiv : the preprint server for health sciences Mar, 2021 | Pubmed ID: 33688669
A rigorous evaluation of optimal peptide targets for MS-based clinical diagnostics of Coronavirus Disease 2019 (COVID-19).
Clinical proteomics May, 2021 | Pubmed ID: 33971807
ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework.
F1000Research , 2021 | Pubmed ID: 34484688
Quantitative Proteogenomic Characterization of Inflamed Murine Colon Tissue Using an Integrated Discovery, Verification, and Validation Proteogenomic Workflow.
Proteomes Apr, 2022 | Pubmed ID: 35466239
Gut microbial β-glucuronidases regulate host luminal proteases and are depleted in irritable bowel syndrome.
Nature microbiology May, 2022 | Pubmed ID: 35484230
Catching the Wave: Detecting Strain-Specific SARS-CoV-2 Peptides in Clinical Samples Collected during Infection Waves from Diverse Geographical Locations.
Viruses Oct, 2022 | Pubmed ID: 36298760
Galaxy Training: A powerful framework for teaching!
PLoS computational biology Jan, 2023 | Pubmed ID: 36622853
An optimized workflow for MS-based quantitative proteomics of challenging clinical bronchoalveolar lavage fluid (BALF) samples.
Clinical proteomics Apr, 2023 | Pubmed ID: 37005570
Integrative meta-omics in Galaxy and beyond.
Environmental microbiome Jul, 2023 | Pubmed ID: 37420292
Metaproteomic Analysis of Nasopharyngeal Swab Samples to Identify Microbial Peptides in COVID-19 Patients.
Journal of proteome research Aug, 2023 | Pubmed ID: 37450889
A Galaxy of informatics resources for MS-based proteomics.
Expert review of proteomics , 2023 | Pubmed ID: 37787106
A novel clinical metaproteomics workflow enables bioinformatic analysis of host-microbe dynamics in disease.
mSphere Jun, 2024 | Pubmed ID: 38780289
Novel Approach to Exploring Protease Activity and Targets in HIV-associated Obstructive Lung Disease using Combined Proteomic-Peptidomic Analysis.
Research square Jun, 2024 | Pubmed ID: 38883770
An integrated metaproteomics workflow for studying host-microbe dynamics in bronchoalveolar lavage samples applied to cystic fibrosis disease.
mSystems Jul, 2024 | Pubmed ID: 38934598
Metaproteomics for Coinfections in the Upper Respiratory Tract: The Case of COVID-19.
Methods in molecular biology (Clifton, N.J.) , 2024 | Pubmed ID: 38941023
Novel approach to exploring protease activity and targets in HIV-associated obstructive lung disease using combined proteomic-peptidomic analysis.
Respiratory research Sep, 2024 | Pubmed ID: 39256809
Discovering Novel Proteoforms Using Proteogenomic Workflows Within the Galaxy Bioinformatics Platform.
Methods in molecular biology (Clifton, N.J.) , 2025 | Pubmed ID: 39436599
Investigating proteogenomic divergence in patient-derived xenograft models of ovarian cancer.
Scientific reports Jan, 2025 | Pubmed ID: 39755759
ABOUT JoVE
Copyright © 2025 MyJoVE Corporation. All rights reserved