Subina Mehta

Department of Biochemistry, University of Minnesota

Research Area

Immunology and Infection

Biography

Subina Mehta has not added Biography.
If you are Subina Mehta and would like to personalize this page please email our Author Liaison for assistance.

JoVE Journal Publications

ArticleTotal : 1	Year
Publication title	2025

Other Publications

Article	Year
Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework. Proteomes\| PubMed ID: 29385081	2018
Bridging the Chromosome-centric and Biology/Disease-driven Human Proteome Projects: Accessible and Automated Tools for Interpreting the Biological and Pathological Impact of Protein Sequence... Journal of proteome research\| PubMed ID: 30130115	2018
Update on the moFF Algorithm for Label-Free Quantitative Proteomics. Journal of proteome research\| PubMed ID: 30511867	2019
Improve your Galaxy text life: The Query Tabular Tool. F1000Research\| PubMed ID: 30519459	2018
QuanTP: A Software Resource for Quantitative Proteo-Transcriptomic Comparative Data Analysis and Informatics. Journal of proteome research\| PubMed ID: 30582332	2019
The Galaxy Platform for Reproducible Affinity Proteomic Mass Spectrometry Data Analysis. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 30980333	2019
metaQuantome: An Integrated, Quantitative Metaproteomics Approach Reveals Connections Between Taxonomy and Protein Function in Complex Microbiomes. Molecular & cellular proteomics : MCP\| PubMed ID: 31235611	2019
Multi-omics Visualization Platform: An extensible Galaxy plug-in for multi-omics data visualization and exploration. GigaScience\| PubMed ID: 32236523	2020
A Sectioning and Database Enrichment Approach for Improved Peptide Spectrum Matching in Large, Genome-Guided Protein Sequence Databases. Journal of proteome research\| PubMed ID: 32396365	2020
Precursor Intensity-Based Label-Free Quantification Software Tools for Proteomic and Multi-Omic Analysis within the Galaxy Platform. Proteomes\| PubMed ID: 32650610	2020
Survey of metaproteomics software tools for functional microbiome analysis. PloS one\| PubMed ID: 33170893	2020
Metaproteomics Analysis of SARS-CoV-2-Infected Patient Samples Reveals Presence of Potential Coinfecting Microorganisms. Journal of proteome research\| PubMed ID: 33393790	2021
Updates on metaQuantome Software for Quantitative Metaproteomics. Journal of proteome research\| PubMed ID: 33683127	2021
A rigorous evaluation of optimal peptide targets for MS-based clinical diagnostics of Coronavirus Disease 2019 (COVID-19). medRxiv : the preprint server for health sciences\| PubMed ID: 33688669	2021
A rigorous evaluation of optimal peptide targets for MS-based clinical diagnostics of Coronavirus Disease 2019 (COVID-19). Clinical proteomics\| PubMed ID: 33971807	2021
ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework. F1000Research\| PubMed ID: 34484688	2021
Quantitative Proteogenomic Characterization of Inflamed Murine Colon Tissue Using an Integrated Discovery, Verification, and Validation Proteogenomic Workflow. Proteomes\| PubMed ID: 35466239	2022
Gut microbial β-glucuronidases regulate host luminal proteases and are depleted in irritable bowel syndrome. Nature microbiology\| PubMed ID: 35484230	2022
Catching the Wave: Detecting Strain-Specific SARS-CoV-2 Peptides in Clinical Samples Collected during Infection Waves from Diverse Geographical Locations. Viruses\| PubMed ID: 36298760	2022
Galaxy Training: A powerful framework for teaching! PLoS computational biology\| PubMed ID: 36622853	2023
An optimized workflow for MS-based quantitative proteomics of challenging clinical bronchoalveolar lavage fluid (BALF) samples. Clinical proteomics\| PubMed ID: 37005570	2023
Integrative meta-omics in Galaxy and beyond. Environmental microbiome\| PubMed ID: 37420292	2023
Metaproteomic Analysis of Nasopharyngeal Swab Samples to Identify Microbial Peptides in COVID-19 Patients. Journal of proteome research\| PubMed ID: 37450889	2023
A Galaxy of informatics resources for MS-based proteomics. Expert review of proteomics\| PubMed ID: 37787106	2023
A novel clinical metaproteomics workflow enables bioinformatic analysis of host-microbe dynamics in disease. mSphere\| PubMed ID: 38780289	2024
Novel Approach to Exploring Protease Activity and Targets in HIV-associated Obstructive Lung Disease using Combined Proteomic-Peptidomic Analysis. Research square\| PubMed ID: 38883770	2024
An integrated metaproteomics workflow for studying host-microbe dynamics in bronchoalveolar lavage samples applied to cystic fibrosis disease. mSystems\| PubMed ID: 38934598	2024
Metaproteomics for Coinfections in the Upper Respiratory Tract: The Case of COVID-19. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 38941023	2024
Novel approach to exploring protease activity and targets in HIV-associated obstructive lung disease using combined proteomic-peptidomic analysis. Respiratory research\| PubMed ID: 39256809	2024
Discovering Novel Proteoforms Using Proteogenomic Workflows Within the Galaxy Bioinformatics Platform. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 39436599	2025
Investigating proteogenomic divergence in patient-derived xenograft models of ovarian cancer. Scientific reports\| PubMed ID: 39755759	2025