Department of Chemical and Biological Engineering,
Chemistry of Life Processes Institute,
Center for Synthetic Biology,
Interdisciplinary Biological Sciences Program
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Update on designing and building minimal cells.
Current opinion in biotechnology Oct, 2010 | Pubmed ID: 20638265
Biology by design: from top to bottom and back.
Journal of biomedicine & biotechnology , 2010 | Pubmed ID: 21052559
Precise manipulation of chromosomes in vivo enables genome-wide codon replacement.
Science (New York, N.Y.) Jul, 2011 | Pubmed ID: 21764749
Cell-free synthetic biology: thinking outside the cell.
Metabolic engineering May, 2012 | Pubmed ID: 21946161
Cell-free protein synthesis: Applications come of age.
Biotechnology advances Oct, 2011 | Pubmed ID: 22008973
Cell-free biology: exploiting the interface between synthetic biology and synthetic chemistry.
Current opinion in biotechnology Oct, 2012 | Pubmed ID: 22483202
Synthetic in vitro circuits.
Current opinion in chemical biology Aug, 2012 | Pubmed ID: 22676890
Multiplexed in vivo His-tagging of enzyme pathways for in vitro single-pot multienzyme catalysis.
ACS synthetic biology Feb, 2012 | Pubmed ID: 22737598
In vitro integration of ribosomal RNA synthesis, ribosome assembly, and translation.
Molecular systems biology Jun, 2013 | Pubmed ID: 23799452
Optimized extract preparation methods and reaction conditions for improved yeast cell-free protein synthesis.
Biotechnology and bioengineering Oct, 2013 | Pubmed ID: 23832321
Mapping Condition Dependent Regulation of Lipid Metabolism in Saccharomyces cerevisiae.
G3 (Bethesda, Md.) Sep, 2013 | Pubmed ID: 24062529
Substrate replenishment and byproduct removal improve yeast cell-free protein synthesis.
Biotechnology journal May, 2014 | Pubmed ID: 24323955
Cell-free protein synthesis from a release factor 1 deficient Escherichia coli activates efficient and multiple site-specific nonstandard amino acid incorporation.
ACS synthetic biology Jun, 2014 | Pubmed ID: 24328168
A combined cell-free transcription-translation system from Saccharomyces cerevisiae for rapid and robust protein synthe.
Biotechnology journal May, 2014 | Pubmed ID: 24677809
Quantifying position-dependent codon usage bias.
Molecular biology and evolution Jul, 2014 | Pubmed ID: 24710515
The impact of transcriptional tuning on in vitro integrated rRNA transcription and ribosome construction.
Nucleic acids research Jun, 2014 | Pubmed ID: 24792158
Cell-free synthetic biology special issue.
ACS synthetic biology Jun, 2014 | Pubmed ID: 24950238
Non-standard amino acid incorporation into proteins using Escherichia coli cell-free protein synthesis.
Frontiers in chemistry , 2014 | Pubmed ID: 24959531
Characterizing IGR IRES-mediated translation initiation for use in yeast cell-free protein synthesis.
New biotechnology Sep, 2014 | Pubmed ID: 25017988
Characterizing and alleviating substrate limitations for improved in vitro ribosome construction.
ACS synthetic biology Apr, 2015 | Pubmed ID: 25079899
Cell-free metabolic engineering: biomanufacturing beyond the cell.
Biotechnology journal Jan, 2015 | Pubmed ID: 25319678
Controlled assembly of artificial protein-protein complexes via DNA duplex formation.
Bioconjugate chemistry Mar, 2015 | Pubmed ID: 25603321
High-throughput preparation methods of crude extract for robust cell-free protein synthesis.
Scientific reports Mar, 2015 | Pubmed ID: 25727242
Improving cell-free protein synthesis through genome engineering of Escherichia coli lacking release factor 1.
Chembiochem : a European journal of chemical biology Mar, 2015 | Pubmed ID: 25737329
pH responsive granulocyte colony-stimulating factor variants with implications for treating Alzheimer's disease and other central nervous system disorders.
Protein engineering, design & selection : PEDS Oct, 2015 | Pubmed ID: 25877663
Implications of macromolecular crowding and reducing conditions for in vitro ribosome construction.
Nucleic acids research May, 2015 | Pubmed ID: 25897121
Energizing eukaryotic cell-free protein synthesis with glucose metabolism.
FEBS letters Jul, 2015 | Pubmed ID: 26054976
Self-Assembly of Temperature-Responsive Protein-Polymer Bioconjugates.
Bioconjugate chemistry Sep, 2015 | Pubmed ID: 26083370
Repurposing the translation apparatus for synthetic biology.
Current opinion in chemical biology Oct, 2015 | Pubmed ID: 26186264
Protein synthesis by ribosomes with tethered subunits.
Nature Aug, 2015 | Pubmed ID: 26222032
Robust production of recombinant phosphoproteins using cell-free protein synthesis.
Nature communications Sep, 2015 | Pubmed ID: 26350765
Cell-free protein synthesis enables high yielding synthesis of an active multicopper oxidase.
Biotechnology journal Feb, 2016 | Pubmed ID: 26356243
A cell-free expression and purification process for rapid production of protein biologics.
Biotechnology journal Feb, 2016 | Pubmed ID: 26427345
Lysate of engineered Escherichia coli supports high-level conversion of glucose to 2,3-butanediol.
Metabolic engineering Nov, 2015 | Pubmed ID: 26428449
Evolution of translation machinery in recoded bacteria enables multi-site incorporation of nonstandard amino acids.
Nature biotechnology Dec, 2015 | Pubmed ID: 26571098
Evolution of translation initiation sequences using in vitro yeast ribosome display.
Biotechnology and bioengineering 08, 2016 | Pubmed ID: 26757179
Editorial: Transforming biotechnology with synthetic biology.
Biotechnology journal Feb, 2016 | Pubmed ID: 26844671
A cell-free framework for rapid biosynthetic pathway prototyping and enzyme discovery.
Metabolic engineering 07, 2016 | Pubmed ID: 26996382
Synthetic biology: Tailor-made genetic codes.
Nature chemistry Apr, 2016 | Pubmed ID: 27001721
Cell-free compartmentalized protein synthesis inside double emulsion templated liposomes with in vitro synthesized and assembled ribosomes.
Chemical communications (Cambridge, England) Apr, 2016 | Pubmed ID: 27019994
Cell-Free Mixing of Escherichia coli Crude Extracts to Prototype and Rationally Engineer High-Titer Mevalonate Synthesis.
ACS synthetic biology 12, 2016 | Pubmed ID: 27476989
In Vitro Reconstruction of Nonribosomal Peptide Biosynthesis Directly from DNA Using Cell-Free Protein Synthesis.
ACS synthetic biology 01, 2017 | Pubmed ID: 27478992
Depletion of Shine-Dalgarno Sequences Within Bacterial Coding Regions Is Expression Dependent.
G3 (Bethesda, Md.) Nov, 2016 | Pubmed ID: 27605518
Cell-Free Synthetic Biology: Engineering Beyond the Cell.
Cold Spring Harbor perspectives in biology Dec, 2016 | Pubmed ID: 27742731
NullSeq: A Tool for Generating Random Coding Sequences with Desired Amino Acid and GC Contents.
PLoS computational biology Nov, 2016 | Pubmed ID: 27835644
Translation system engineering in Escherichia coli enhances non-canonical amino acid incorporation into proteins.
Biotechnology and bioengineering 05, 2017 | Pubmed ID: 27987323
Leveraging genome-wide datasets to quantify the functional role of the anti-Shine-Dalgarno sequence in regulating translation efficiency.
Open biology 01, 2017 | Pubmed ID: 28100663
Establishing a high yielding streptomyces-based cell-free protein synthesis system.
Biotechnology and bioengineering 06, 2017 | Pubmed ID: 28112394
Cogenerating Synthetic Parts toward a Self-Replicating System.
ACS synthetic biology 07, 2017 | Pubmed ID: 28330337
Development of a CHO-Based Cell-Free Platform for Synthesis of Active Monoclonal Antibodies.
ACS synthetic biology 07, 2017 | Pubmed ID: 28350472
Repurposing ribosomes for synthetic biology.
Current opinion in chemical biology Oct, 2017 | Pubmed ID: 28869851
A Pipeline for Studying and Engineering Single-Subunit Oligosaccharyltransferases.
Methods in enzymology , 2017 | Pubmed ID: 28935112
Yeast knockout library allows for efficient testing of genomic mutations for cell-free protein synthesis.
Synthetic and systems biotechnology Mar, 2016 | Pubmed ID: 29062921
Controlling cell-free metabolism through physiochemical perturbations.
Metabolic engineering 01, 2018 | Pubmed ID: 29155060
Editorial overview: Synthetic biology: Frontiers in synthetic biology.
Current opinion in chemical biology 10, 2017 | Pubmed ID: 29156192
A cell-free platform for rapid synthesis and testing of active oligosaccharyltransferases.
Biotechnology and bioengineering 03, 2018 | Pubmed ID: 29178580
Diversity of translation initiation mechanisms across bacterial species is driven by environmental conditions and growth demands.
Molecular biology and evolution Dec, 2017 | Pubmed ID: 29220489
Toward an orthogonal central dogma.
Nature chemical biology Jan, 2018 | Pubmed ID: 29337969
A novel framework for evaluating the performance of codon usage bias metrics.
Journal of the Royal Society, Interface Jan, 2018 | Pubmed ID: 29386398
Incorporation of Nonproteinogenic Amino Acids in Class I and II Lantibiotics.
ACS chemical biology 04, 2018 | Pubmed ID: 29439566
How many human proteoforms are there?
Nature chemical biology Feb, 2018 | Pubmed ID: 29443976
A Pressure Test to Make 10 Molecules in 90 Days: External Evaluation of Methods to Engineer Biology.
Journal of the American Chemical Society 03, 2018 | Pubmed ID: 29480720
Cell-free protein synthesis from genomically recoded bacteria enables multisite incorporation of noncanonical amino acids.
Nature communications 03, 2018 | Pubmed ID: 29572528
Engineered Ribosomes for Basic Science and Synthetic Biology.
Annual review of chemical and biomolecular engineering Jun, 2018 | Pubmed ID: 29589973
Design of glycosylation sites by rapid synthesis and analysis of glycosyltransferases.
Nature chemical biology Jun, 2018 | Pubmed ID: 29736039
Single-pot glycoprotein biosynthesis using a cell-free transcription-translation system enriched with glycosylation machinery.
Nature communications 07, 2018 | Pubmed ID: 30002445
BioBits™ Explorer: A modular synthetic biology education kit.
Science advances Aug, 2018 | Pubmed ID: 30083608
BioBits™ Bright: A fluorescent synthetic biology education kit.
Science advances Aug, 2018 | Pubmed ID: 30083609
Within-Gene Shine-Dalgarno Sequences Are Not Selected for Function.
Molecular biology and evolution Oct, 2018 | Pubmed ID: 30085185
Author Correction: Single-pot glycoprotein biosynthesis using a cell-free transcription-translation system enriched with glycosylation machinery.
Nature communications 08, 2018 | Pubmed ID: 30127449
Cell-Free Synthetic Biology for Pathway Prototyping.
Methods in enzymology , 2018 | Pubmed ID: 30173768
Exposed to Sublethal Levels of Hydrogen Peroxide Mounts a Complex Transcriptional Response.
mSystems Sep-Oct, 2018 | Pubmed ID: 30320218
Deconstructing Cell-Free Extract Preparation for in Vitro Activation of Transcriptional Genetic Circuitry.
ACS synthetic biology Feb, 2019 | Pubmed ID: 30596483
Max Z. Levine*,1,2,
Nicole E. Gregorio*,2,3,
Michael C. Jewett4,5,6,7,
Katharine R. Watts2,3,
Javin P. Oza2,3
1Department of Biological Sciences, California Polytechnic State University, San Luis Obispo,
2Center for Applications in Biotechnology, California Polytechnic State University, San Luis Obispo,
3Department of Chemistry and Biochemistry, California Polytechnic State University,
4Department of Chemical and Biological Engineering, Northwestern University,
5Chemistry of Life Processes Institute, Northwestern University,
6Center for Synthetic Biology, Northwestern University,
7Interdisciplinary Biological Sciences Program, Northwestern University
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