Department of Physiology,
Department of Biomedical Engineering and Imaging
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Continuous exposure of airway epithelial cells to hydrogen peroxide: protection by KGF.
Journal of cellular physiology Jul, 2002 | Pubmed ID: 12115738
Cellular biomechanics in the lung.
American journal of physiology. Lung cellular and molecular physiology Sep, 2002 | Pubmed ID: 12169567
Mechanism of glutamate stimulation of CO production in cerebral microvessels.
American journal of physiology. Heart and circulatory physiology Jul, 2003 | Pubmed ID: 12623781
Enterococcus faecalis plasmid pAD1-encoded Fst toxin affects membrane permeability and alters cellular responses to lantibiotics.
Journal of bacteriology Apr, 2003 | Pubmed ID: 12644486
Role of the Enterococcus faecalis GelE protease in determination of cellular chain length, supernatant pheromone levels, and degradation of fibrin and misfolded surface proteins.
Journal of bacteriology Jun, 2003 | Pubmed ID: 12775699
The aggregation domain of aggregation substance, not the RGD motifs, is critical for efficient internalization by HT-29 enterocytes.
Infection and immunity Oct, 2003 | Pubmed ID: 14500489
Nrf2, not the estrogen receptor, mediates catechol estrogen-induced activation of the antioxidant responsive element.
Biochimica et biophysica acta Oct, 2003 | Pubmed ID: 14522084
Mathematical modeling of airway epithelial wound closure during cyclic mechanical strain.
Journal of applied physiology (Bethesda, Md. : 1985) Feb, 2004 | Pubmed ID: 14715680
Nitric oxide attenuates insulin- or IGF-I-stimulated aortic smooth muscle cell motility by decreasing H2O2 levels: essential role of cGMP.
American journal of physiology. Heart and circulatory physiology Jun, 2004 | Pubmed ID: 14751855
Actin re-distribution in response to hydrogen peroxide in airway epithelial cells.
Journal of cellular physiology Apr, 2004 | Pubmed ID: 14978735
An amino-terminal domain of Enterococcus faecalis aggregation substance is required for aggregation, bacterial internalization by epithelial cells and binding to lipoteichoic acid.
Molecular microbiology May, 2004 | Pubmed ID: 15130132
Ionic mechanisms mediating the myogenic response in newborn porcine cerebral arteries.
American journal of physiology. Heart and circulatory physiology Nov, 2004 | Pubmed ID: 15284060
Microbore HPLC method with online microdialysis for measurement of topotecan lactone and carboxylate in murine CSF.
Journal of pharmaceutical sciences Sep, 2004 | Pubmed ID: 15295789
RhoA and Rac1 are both required for efficient wound closure of airway epithelial cells.
American journal of physiology. Lung cellular and molecular physiology Dec, 2004 | Pubmed ID: 15298851
Reactive oxygen species in mechanotransduction.
American journal of physiology. Lung cellular and molecular physiology Sep, 2004 | Pubmed ID: 15308497
Regulation of cell motility by tyrosine phosphorylated villin.
Molecular biology of the cell Nov, 2004 | Pubmed ID: 15342783
Cyclic mechanical strain increases reactive oxygen species production in pulmonary epithelial cells.
American journal of physiology. Lung cellular and molecular physiology Nov, 2005 | Pubmed ID: 15964900
KGF prevents oxygen-mediated damage in ARPE-19 cells.
Investigative ophthalmology & visual science Sep, 2005 | Pubmed ID: 16123449
Quorum sensing: cell-to-cell communication in bacteria.
Annual review of cell and developmental biology , 2005 | Pubmed ID: 16212498
Nitric oxide attenuates IGF-I-induced aortic smooth muscle cell motility by decreasing Rac1 activity: essential role of PTP-PEST and p130cas.
American journal of physiology. Cell physiology Apr, 2006 | Pubmed ID: 16354758
Pharmacokinetic considerations in the treatment of CNS tumours.
Clinical pharmacokinetics , 2006 | Pubmed ID: 16928151
The Vibrio harveyi quorum-sensing system uses shared regulatory components to discriminate between multiple autoinducers.
Genes & development Oct, 2006 | Pubmed ID: 17015436
Topotecan central nervous system penetration is altered by a tyrosine kinase inhibitor.
Cancer research Dec, 2006 | Pubmed ID: 17145877
Janus kinase 3 regulates interleukin 2-induced mucosal wound repair through tyrosine phosphorylation of villin.
The Journal of biological chemistry Oct, 2007 | Pubmed ID: 17537734
High tidal volume mechanical ventilation with hyperoxia alters alveolar type II cell adhesion.
American journal of physiology. Lung cellular and molecular physiology Sep, 2007 | Pubmed ID: 17601798
Airway strain during mechanical ventilation in an intact animal model.
American journal of respiratory and critical care medicine Oct, 2007 | Pubmed ID: 17626911
A negative feedback loop involving small RNAs accelerates Vibrio cholerae's transition out of quorum-sensing mode.
Genes & development Jan, 2008 | Pubmed ID: 18198339
Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT.
Journal of bacteriology Apr, 2008 | Pubmed ID: 18223081
IP3 constricts cerebral arteries via IP3 receptor-mediated TRPC3 channel activation and independently of sarcoplasmic reticulum Ca2+ release.
Circulation research May, 2008 | Pubmed ID: 18388325
Localized elasticity measured in epithelial cells migrating at a wound edge using atomic force microscopy.
American journal of physiology. Lung cellular and molecular physiology Jul, 2008 | Pubmed ID: 18487359
Dexamethasone increases expression and activity of multidrug resistance transporters at the rat blood-brain barrier.
American journal of physiology. Cell physiology Aug, 2008 | Pubmed ID: 18524938
Mechanical stretch decreases migration of alveolar epithelial cells through mechanisms involving Rac1 and Tiam1.
American journal of physiology. Lung cellular and molecular physiology Nov, 2008 | Pubmed ID: 18805958
A small-RNA-mediated negative feedback loop controls quorum-sensing dynamics in Vibrio harveyi.
Molecular microbiology Nov, 2008 | Pubmed ID: 18808382
Compartment-specific roles of ATP-binding cassette transporters define differential topotecan distribution in brain parenchyma and cerebrospinal fluid.
Cancer research Jul, 2009 | Pubmed ID: 19567673
Mechanical stretch decreases FAK phosphorylation and reduces cell migration through loss of JIP3-induced JNK phosphorylation in airway epithelial cells.
American journal of physiology. Lung cellular and molecular physiology Sep, 2009 | Pubmed ID: 19574423
Angiotensin II-induced migration of vascular smooth muscle cells is mediated by p38 mitogen-activated protein kinase-activated c-Src through spleen tyrosine kinase and epidermal growth factor receptor transactivation.
The Journal of pharmacology and experimental therapeutics Jan, 2010 | Pubmed ID: 19797620
Cyclic mechanical stretch decreases cell migration by inhibiting phosphatidylinositol 3-kinase- and focal adhesion kinase-mediated JNK1 activation.
The Journal of biological chemistry Feb, 2010 | Pubmed ID: 20018857
Epithelial repair mechanisms in the lung.
American journal of physiology. Lung cellular and molecular physiology Jun, 2010 | Pubmed ID: 20363851
Tyrosine kinase inhibitor gefitinib enhances topotecan penetration of gliomas.
Cancer research Jun, 2010 | Pubmed ID: 20460504
Control of the type 3 secretion system in Vibrio harveyi by quorum sensing through repression of ExsA.
Applied and environmental microbiology Aug, 2010 | Pubmed ID: 20543047
P-glycoprotein, but not multidrug resistance protein 4, plays a role in the systemic clearance of irinotecan and SN-38 in mice.
Drug metabolism letters Dec, 2010 | Pubmed ID: 20583968
Preexposure to hyperoxia causes increased lung injury and epithelial apoptosis in mice ventilated with high tidal volumes.
American journal of physiology. Lung cellular and molecular physiology Nov, 2010 | Pubmed ID: 20833778
Systematic analysis of cyclic di-GMP signalling enzymes and their role in biofilm formation and virulence in Yersinia pestis.
Molecular microbiology Jan, 2011 | Pubmed ID: 21219468
Identification of a novel benzimidazole that inhibits bacterial biofilm formation in a broad-spectrum manner.
Antimicrobial agents and chemotherapy Sep, 2011 | Pubmed ID: 21709104
Balance of life and death in alveolar epithelial type II cells: proliferation, apoptosis, and the effects of cyclic stretch on wound healing.
American journal of physiology. Lung cellular and molecular physiology Oct, 2011 | Pubmed ID: 21724858
Lung injury caused by high tidal volume mechanical ventilation and hyperoxia is dependent on oxidant-mediated c-Jun NH2-terminal kinase activation.
Journal of applied physiology (Bethesda, Md. : 1985) Nov, 2011 | Pubmed ID: 21799126
What do we know about mechanical strain in lung alveoli?
American journal of physiology. Lung cellular and molecular physiology Nov, 2011 | Pubmed ID: 21873445
Integration of cyclic di-GMP and quorum sensing in the control of vpsT and aphA in Vibrio cholerae.
Journal of bacteriology Nov, 2011 | Pubmed ID: 21926235
Regulation and function of the two-pore-domain (K2P) potassium channel Trek-1 in alveolar epithelial cells.
American journal of physiology. Lung cellular and molecular physiology Jan, 2012 | Pubmed ID: 21949155
Deletion of apoptosis signal-regulating kinase-1 prevents ventilator-induced lung injury in mice.
American journal of respiratory cell and molecular biology Apr, 2012 | Pubmed ID: 22052879
Molecular mechanism of interleukin-2-induced mucosal homeostasis.
American journal of physiology. Cell physiology Mar, 2012 | Pubmed ID: 22116305
CXCR4 regulates migration of lung alveolar epithelial cells through activation of Rac1 and matrix metalloproteinase-2.
American journal of physiology. Lung cellular and molecular physiology May, 2012 | Pubmed ID: 22345572
Hyperoxia alters the mechanical properties of alveolar epithelial cells.
American journal of physiology. Lung cellular and molecular physiology Jun, 2012 | Pubmed ID: 22467640
Cyclic diguanylate inversely regulates motility and aggregation in Clostridium difficile.
Journal of bacteriology Jul, 2012 | Pubmed ID: 22522894
A tangled web: regulatory connections between quorum sensing and cyclic Di-GMP.
Journal of bacteriology Sep, 2012 | Pubmed ID: 22661686
Evolution of resistance to quorum quenching in digital organisms.
Artificial life , 2012 | Pubmed ID: 22662911
Quantification of high-specificity cyclic diguanylate signaling.
Proceedings of the National Academy of Sciences of the United States of America Jul, 2012 | Pubmed ID: 22802636
Correlation between in vivo biofilm formation and virulence gene expression in Escherichia coli O104:H4.
PloS one , 2012 | Pubmed ID: 22848550
Identification of small molecules that antagonize diguanylate cyclase enzymes to inhibit biofilm formation.
Antimicrobial agents and chemotherapy Oct, 2012 | Pubmed ID: 22850508
Hfq-dependent, co-ordinate control of cyclic diguanylate synthesis and catabolism in the plague pathogen Yersinia pestis.
Molecular microbiology Nov, 2012 | Pubmed ID: 22924957
Bacterial wheel locks: extracellular polysaccharide inhibits flagellar rotation.
Journal of bacteriology Feb, 2013 | Pubmed ID: 23204465
Exposure of Salmonella enterica Serovar Typhimurium to a Protective Monoclonal IgA Triggers Exopolysaccharide Production via a Diguanylate Cyclase-Dependent Pathway.
Infection and immunity Mar, 2013 | Pubmed ID: 23230292
Regulation of interleukin-6 secretion by the two-pore-domain potassium channel Trek-1 in alveolar epithelial cells.
American journal of physiology. Lung cellular and molecular physiology Feb, 2013 | Pubmed ID: 23275623
Cyclic Di-GMP Modulates the Disease Progression of Erwinia amylovora.
Journal of bacteriology May, 2013 | Pubmed ID: 23475975
STING-dependent recognition of cyclic di-AMP mediates type I interferon responses during Chlamydia trachomatis infection.
mBio , 2013 | Pubmed ID: 23631912
Insulin-like growth factor-I stimulates differentiation of ATII cells to ATI-like cells through activation of Wnt5a.
American journal of physiology. Lung cellular and molecular physiology Aug, 2013 | Pubmed ID: 23709620
Mechanobiology in lung epithelial cells: measurements, perturbations, and responses.
Comprehensive Physiology Jan, 2012 | Pubmed ID: 23728969
Exploring environmental control of cyclic di-GMP signaling in Vibrio cholerae by using the ex vivo lysate cyclic di-GMP assay (TELCA).
Applied and environmental microbiology Sep, 2013 | Pubmed ID: 23793642
Genetic analysis of Agrobacterium tumefaciens unipolar polysaccharide production reveals complex integrated control of the motile-to-sessile switch.
Molecular microbiology Sep, 2013 | Pubmed ID: 23829710
Post-transcriptional activation of a diguanylate cyclase by quorum sensing small RNAs promotes biofilm formation in Vibrio cholerae.
Molecular microbiology Sep, 2013 | Pubmed ID: 23841714
Occurrence of cyclic di-GMP-modulating output domains in cyanobacteria: an illuminating perspective.
mBio , 2013 | Pubmed ID: 23943760
Regulation of Monocyte Chemotactic Protein-1 secretion by the Two-Pore-Domain Potassium (K2P) channel TREK-1 in human alveolar epithelial cells.
American journal of translational research , 2013 | Pubmed ID: 23977412
Two DHH subfamily 1 proteins in Streptococcus pneumoniae possess cyclic di-AMP phosphodiesterase activity and affect bacterial growth and virulence.
Journal of bacteriology Nov, 2013 | Pubmed ID: 24013631
Identification of small molecules inhibiting diguanylate cyclases to control bacterial biofilm development.
Biofouling Jan, 2014 | Pubmed ID: 24117391
Cyclic di-GMP inhibits Vibrio cholerae motility by repressing induction of transcription and inducing extracellular polysaccharide production.
Molecular microbiology Dec, 2013 | Pubmed ID: 24134710
Hyperoxia increases the elastic modulus of alveolar epithelial cells through Rho kinase.
The FEBS journal Feb, 2014 | Pubmed ID: 24289040
The Vibrio cholerae diguanylate cyclase VCA0965 has an AGDEF active site and synthesizes cyclic di-GMP.
BMC microbiology , 2014 | Pubmed ID: 24490592
The 2-pore domain potassium channel TREK-1 regulates stretch-induced detachment of alveolar epithelial cells.
PloS one , 2014 | Pubmed ID: 24586773
Cyclic stretch disrupts apical junctional complexes in Caco-2 cell monolayers by a JNK-2-, c-Src-, and MLCK-dependent mechanism.
American journal of physiology. Gastrointestinal and liver physiology Jun, 2014 | Pubmed ID: 24722904
Bile acids and bicarbonate inversely regulate intracellular cyclic di-GMP in Vibrio cholerae.
Infection and immunity Jul, 2014 | Pubmed ID: 24799624
Modulation of radiation injury response in retinal endothelial cells by quinic acid derivative KZ-41 involves p38 MAPK.
PloS one , 2014 | Pubmed ID: 24956278
Deficiency of the two-pore-domain potassium channel TREK-1 promotes hyperoxia-induced lung injury.
Critical care medicine Nov, 2014 | Pubmed ID: 25126877
Autotaxin and LPA1 and LPA5 receptors exert disparate functions in tumor cells versus the host tissue microenvironment in melanoma invasion and metastasis.
Molecular cancer research : MCR Jan, 2015 | Pubmed ID: 25158955
Deciphering the components that coordinately regulate virulence factors of the soft rot pathogen Dickeya dadantii.
Molecular plant-microbe interactions : MPMI Oct, 2014 | Pubmed ID: 25180688
Stimulation of innate immunity by in vivo cyclic di-GMP synthesis using adenovirus.
Clinical and vaccine immunology : CVI Nov, 2014 | Pubmed ID: 25230938
The Meteoric Rise of the Signaling Molecule Cyclic di-GMP.
Microbe (Washington, D.C.) , 2012 | Pubmed ID: 25505855
The Yersinia pestis HmsCDE regulatory system is essential for blockage of the oriental rat flea (Xenopsylla cheopis), a classic plague vector.
Environmental microbiology Apr, 2015 | Pubmed ID: 25586342
Intestinal GPS: bile and bicarbonate control cyclic di-GMP to provide Vibrio cholerae spatial cues within the small intestine.
Gut microbes , 2014 | Pubmed ID: 25621620
The Cyclic Di-GMP Phosphodiesterase Gene Rv1357c/BCG1419c Affects BCG Pellicle Production and In Vivo Maintenance.
IUBMB life Feb, 2015 | Pubmed ID: 25865678
Intracellular Concentrations of Borrelia burgdorferi Cyclic Di-AMP Are Not Changed by Altered Expression of the CdaA Synthase.
PloS one , 2015 | Pubmed ID: 25906393
TREK-1 Regulates Cytokine Secretion from Cultured Human Alveolar Epithelial Cells Independently of Cytoskeletal Rearrangements.
PloS one , 2015 | Pubmed ID: 26001192
A Pterin-Dependent Signaling Pathway Regulates a Dual-Function Diguanylate Cyclase-Phosphodiesterase Controlling Surface Attachment in Agrobacterium tumefaciens.
mBio , 2015 | Pubmed ID: 26126849
Regulation of biofilm formation and cellular buoyancy through modulating intracellular cyclic di-GMP levels in engineered cyanobacteria.
Biotechnology and bioengineering Jul, 2015 | Pubmed ID: 26192200
Oligoribonuclease is the primary degradative enzyme for pGpG in Pseudomonas aeruginosa that is required for cyclic-di-GMP turnover.
Proceedings of the National Academy of Sciences of the United States of America Sep, 2015 | Pubmed ID: 26305945
Cross-talk between a regulatory small RNA, cyclic-di-GMP signalling and flagellar regulator FlhDC for virulence and bacterial behaviours.
Environmental microbiology Nov, 2015 | Pubmed ID: 26462993
Kymographic Imaging of the Elastic Modulus of Epithelial Cells during the Onset of Migration.
Biophysical journal Nov, 2015 | Pubmed ID: 26588564
Chronic hypersensitivity pneumonitis caused by Saccharopolyspora rectivirgula is not associated with a switch to a Th2 response.
American journal of physiology. Lung cellular and molecular physiology Mar, 2016 | Pubmed ID: 26719148
In Vivo Synthesis of Cyclic-di-GMP Using a Recombinant Adenovirus Preferentially Improves Adaptive Immune Responses against Extracellular Antigens.
Journal of immunology (Baltimore, Md. : 1950) Feb, 2016 | Pubmed ID: 26792800
Evolution of Ecological Diversity in Biofilms of Pseudomonas aeruginosa by Altered Cyclic Diguanylate Signaling.
Journal of bacteriology Oct, 2016 | Pubmed ID: 27021563
Spermidine Inversely Influences Surface Interactions and Planktonic Growth in Agrobacterium tumefaciens.
Journal of bacteriology Oct, 2016 | Pubmed ID: 27402627
Bacterial Quorum Sensing Stabilizes Cooperation by Optimizing Growth Strategies.
Applied and environmental microbiology Nov, 2016 | Pubmed ID: 27565619
A Filter Binding Assay to Quantify the Association of Cyclic di-GMP to Proteins.
Bio-protocol Jan, 2015 | Pubmed ID: 27588300
Polysorbates prevent biofilm formation and pathogenesis of Escherichia coli O104:H4.
Biofouling Oct, 2016 | Pubmed ID: 27667095
Contextual organismality: Beyond pattern to process in the emergence of organisms.
Evolution; international journal of organic evolution Dec, 2016 | Pubmed ID: 27704542
Cyclic di-AMP Released from Staphylococcus aureus Biofilm Induces a Macrophage Type I Interferon Response.
Infection and immunity Dec, 2016 | Pubmed ID: 27736778
Long-Term Evolution of Burkholderia multivorans during a Chronic Cystic Fibrosis Infection Reveals Shifting Forces of Selection.
mSystems May-Jun, 2016 | Pubmed ID: 27822534
Calcium-mediated oxidative stress: a common mechanism in tight junction disruption by different types of cellular stress.
The Biochemical journal Feb, 2017 | Pubmed ID: 28057718
A heteromeric molecular complex regulates the migration of lung alveolar epithelial cells during wound healing.
Scientific reports May, 2017 | Pubmed ID: 28526890
Enhancing multiplex genome editing by natural transformation (MuGENT) via inactivation of ssDNA exonucleases.
Nucleic acids research Jul, 2017 | Pubmed ID: 28575400
Cyclic Di-GMP and VpsR Induce the Expression of Type II Secretion in Vibrio cholerae.
Journal of bacteriology Oct, 2017 | Pubmed ID: 28674069
Airway Epithelial Repair by a Prebiotic Mannan Derived from Saccharomyces cerevisiae.
Journal of immunology research , 2017 | Pubmed ID: 28770233
Spermine inhibits Vibrio cholerae biofilm formation through the NspS-MbaA polyamine signaling system.
The Journal of biological chemistry Aug, 2017 | Pubmed ID: 28827313
Hyperoxia treatment of TREK-1/TREK-2/TRAAK-deficient mice is associated with a reduction in surfactant proteins.
American journal of physiology. Lung cellular and molecular physiology Aug, 2017 | Pubmed ID: 28839101
Spectrophotometric and Mass Spectroscopic Methods for the Quantification and Kinetic Evaluation of In Vitro c-di-GMP Synthesis.
Methods in molecular biology (Clifton, N.J.) , 2017 | Pubmed ID: 28889287
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