Department of Chemistry & Biochemistry
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ILPR G-quadruplexes formed in seconds demonstrate high mechanical stabilities.
Journal of the American Chemical Society Feb, 2009 | Pubmed ID: 19154151
Direct experimental evidence for quadruplex-quadruplex interaction within the human ILPR.
Nucleic acids research Jun, 2009 | Pubmed ID: 19324891
ILPR repeats adopt diverse G-quadruplex conformations that determine insulin binding.
Biopolymers Jan, 2010 | Pubmed ID: 19688813
Coexistence of an ILPR i-motif and a partially folded structure with comparable mechanical stability revealed at the single-molecule level.
Journal of the American Chemical Society Jul, 2010 | Pubmed ID: 20545340
Detection of single nucleotide polymorphism using tension-dependent stochastic behavior of a single-molecule template.
Journal of the American Chemical Society Jul, 2011 | Pubmed ID: 21639132
A single-molecule platform for investigation of interactions between G-quadruplexes and small-molecule ligands.
Nature chemistry Aug, 2011 | Pubmed ID: 21941250
Intramolecular folding in three tandem guanine repeats of human telomeric DNA.
Chemical communications (Cambridge, England) Feb, 2012 | Pubmed ID: 22234724
Tertiary DNA Structure in the Single-Stranded hTERT Promoter Fragment Unfolds and Refolds by Parallel Pathways via Cooperative or Sequential Events.
Journal of the American Chemical Society Mar, 2012 | Pubmed ID: 22372563
Single-molecule measurements of the binding between small molecules and DNA aptamers.
Analytical chemistry Jun, 2012 | Pubmed ID: 22702719
G-quadruplex and i-motif are mutually exclusive in ILPR double-stranded DNA.
Biophysical journal Jun, 2012 | Pubmed ID: 22713573
Intramolecular folding in human ILPR fragment with three C-rich repeats.
PloS one , 2012 | Pubmed ID: 22761750
Click chemistry assisted single-molecule fingerprinting reveals a 3D biomolecular folding funnel.
Journal of the American Chemical Society Aug, 2012 | Pubmed ID: 22799529
Long-Loop G-Quadruplexes are Misfolded Population Minorities with Fast Transition Kinetics in Human Telomeric Sequences.
Journal of the American Chemical Society Jan, 2013 | Pubmed ID: 23327686
Non-B DNA structures show diverse conformations and complex transition kinetics comparable to RNA or proteins--a perspective from mechanical unfolding and refolding experiments.
Chemical record (New York, N.Y.) Feb, 2013 | Pubmed ID: 23389854
Structural and mechanical properties of individual human telomeric G-quadruplexes in molecularly crowded solutions.
Nucleic acids research Apr, 2013 | Pubmed ID: 23396442
Mechanochemical properties of individual human telomeric RNA (TERRA) G-quadruplexes.
Chembiochem : a European journal of chemical biology Oct, 2013 | Pubmed ID: 24038851
Controlled particle collision leads to direct observation of docking and fusion of lipid droplets in an optical trap.
Langmuir : the ACS journal of surfaces and colloids Feb, 2014 | Pubmed ID: 24447288
Yoctoliter thermometry for single-molecule investigations: a generic bead-on-a-tip temperature-control module.
Angewandte Chemie (International ed. in English) Mar, 2014 | Pubmed ID: 24596309
Molecular population dynamics of DNA structures in a bcl-2 promoter sequence is regulated by small molecules and the transcription factor hnRNP LL.
Nucleic acids research May, 2014 | Pubmed ID: 24609386
Nascent RNA transcripts facilitate the formation of G-quadruplexes.
Nucleic acids research Jun, 2014 | Pubmed ID: 24829453
Single-molecule mechanochemical sensing using DNA origami nanostructures.
Angewandte Chemie (International ed. in English) Jul, 2014 | Pubmed ID: 24931175
Intermediates stabilized by tryptophan pairs exist in trpzip Beta-hairpins.
Biochemistry Sep, 2014 | Pubmed ID: 25164564
Quantification of topological coupling between DNA superhelicity and G-quadruplex formation.
Journal of the American Chemical Society Oct, 2014 | Pubmed ID: 25216033
Direct quantification of loop interaction and π-π stacking for G-quadruplex stability at the submolecular level.
Journal of the American Chemical Society Nov, 2014 | Pubmed ID: 25296000
Dual binding of an antibody and a small molecule increases the stability of TERRA G-quadruplex.
Angewandte Chemie (International ed. in English) Jan, 2015 | Pubmed ID: 25421962
Interaction of G-quadruplexes in the full-length 3' human telomeric overhang.
Journal of the American Chemical Society Dec, 2014 | Pubmed ID: 25438191
Dissecting cooperative communications in a protein with a high-throughput single-molecule scalpel.
Chemphyschem : a European journal of chemical physics and physical chemistry Jan, 2015 | Pubmed ID: 25470139
Divalent cations and molecular crowding buffers stabilize G-triplex at physiologically relevant temperatures.
Scientific reports Mar, 2015 | Pubmed ID: 25787838
Mechanochemical Sensing: A Biomimetic Sensing Strategy.
Chemphyschem : a European journal of chemical physics and physical chemistry Jun, 2015 | Pubmed ID: 25916512
A molecular tuning fork in single-molecule mechanochemical sensing.
Angewandte Chemie (International ed. in English) Jun, 2015 | Pubmed ID: 25960021
Dual Binding of an Antibody and a Small Molecule Increases the Stability of TERRA G-Quadruplex.
Angewandte Chemie (Weinheim an der Bergstrasse, Germany) Jan, 2015 | Pubmed ID: 26300569
Exploded view of higher order G-quadruplex structures through click-chemistry assisted single-molecule mechanical unfolding.
Nucleic acids research Jan, 2016 | Pubmed ID: 26626151
Mutually Exclusive Formation of G-Quadruplex and i-Motif Is a General Phenomenon Governed by Steric Hindrance in Duplex DNA.
Biochemistry Apr, 2016 | Pubmed ID: 27027664
Mechanical properties of DNA origami nanoassemblies are determined by Holliday junction mechanophores.
Nucleic acids research 08, 2016 | Pubmed ID: 27387283
Mechanochemical Sensing of Single and Few Hg(II) Ions Using Polyvalent Principles.
Analytical chemistry 10, 2016 | Pubmed ID: 27618437
A Pharmacological Chaperone Molecule Induces Cancer Cell Death by Restoring Tertiary DNA Structures in Mutant hTERT Promoters.
Journal of the American Chemical Society Oct, 2016 | Pubmed ID: 27643954
A Mechanosensor Mechanism Controls the G-Quadruplex/i-Motif Molecular Switch in the MYC Promoter NHE III.
Journal of the American Chemical Society Oct, 2016 | Pubmed ID: 27669098
Confined space facilitates G-quadruplex formation.
Nature nanotechnology 07, 2017 | Pubmed ID: 28346457
Adaptive and Specific Recognition of Telomeric G-Quadruplexes via Polyvalency Induced Unstacking of Binding Units.
Journal of the American Chemical Society 06, 2017 | Pubmed ID: 28505453
Quantification of Chemical and Mechanical Effects on the Formation of the G-Quadruplex and i-Motif in Duplex DNA.
Biochemistry 09, 2017 | Pubmed ID: 28738141
Single-Molecule Mechanochemical pH Sensing Revealing the Proximity Effect of Hydroniums Generated by an Alkaline Phosphatase.
Analytical chemistry 02, 2018 | Pubmed ID: 29285923
A New Concentration Jump Strategy Reveals the Lifetime of i-Motif at Physiological pH without Force.
Analytical chemistry 03, 2018 | Pubmed ID: 29400441
Mechanical Cooperativity in DNA Cruciform Structures.
Chemphyschem : a European journal of chemical physics and physical chemistry 10, 2018 | Pubmed ID: 29992736
Decreased water activity in nanoconfinement contributes to the folding of G-quadruplex and i-motif structures.
Proceedings of the National Academy of Sciences of the United States of America 09, 2018 | Pubmed ID: 30181280
Binding of a Telomestatin Derivative Changes the Mechanical Anisotropy of a Human Telomeric G-Quadruplex.
Angewandte Chemie (International ed. in English) 01, 2019 | Pubmed ID: 30476359
Random Formation of G-Quadruplexes in the Full-Length Human Telomere Overhangs Leads to a Kinetic Folding Pattern with Targetable Vacant G-Tracts.
Biochemistry 12, 2018 | Pubmed ID: 30480434
Submolecular dissection reveals strong and specific binding of polyamide-pyridostatin conjugates to human telomere interface.
Nucleic acids research 04, 2019 | Pubmed ID: 30820532
Single-Molecule Mechanochemical Sensing Using DNA Origami Nanostructures.
Methods in molecular biology (Clifton, N.J.) , 2019 | Pubmed ID: 31309481
Single-Molecule Investigations of G-Quadruplex.
Methods in molecular biology (Clifton, N.J.) , 2019 | Pubmed ID: 31444756
Single-Molecule Topochemical Analyses for Large-Scale Multiplexing Tasks.
Analytical chemistry 11, 2019 | Pubmed ID: 31553880
Chaperone-Assisted Host-Guest Interactions Revealed by Single-Molecule Force Spectroscopy.
Journal of the American Chemical Society 11, 2019 | Pubmed ID: 31679339
Duplex DNA Is Weakened in Nanoconfinement.
Journal of the American Chemical Society 06, 2020 | Pubmed ID: 32383870
Detecting the Coronavirus (COVID-19).
ACS sensors 08, 2020 | Pubmed ID: 32627534
A poly(thymine)-melamine duplex for the assembly of DNA nanomaterials.
Nature materials 09, 2020 | Pubmed ID: 32661383
Ensemble Sensing Using Single-Molecule DNA Copolymers.
Analytical chemistry 10, 2020 | Pubmed ID: 32829637
Cooperative Heteroligand Interaction with G-Quadruplexes Shows Evidence of Allosteric Binding.
Biochemistry 09, 2020 | Pubmed ID: 32833433
Chemo-Mechanical Modulation of Cell Motions Using DNA Nanosprings.
Bioconjugate chemistry 02, 2021 | Pubmed ID: 33475341
Mechanochemical properties of DNA origami nanosprings revealed by force jumps in optical tweezers.
Nanoscale May, 2021 | Pubmed ID: 33908965
Mechanical unfolding of ensemble biomolecular structures by shear force.
Chemical science Aug, 2021 | Pubmed ID: 34377405
DNA origami nano-mechanics.
Chemical Society reviews Nov, 2021 | Pubmed ID: 34499072
Measurement of Single-Molecule Forces in Cholesterol and Cyclodextrin Host-Guest Complexes.
The journal of physical chemistry. B 10, 2021 | Pubmed ID: 34523939
Correction: DNA origami nano-mechanics.
Chemical Society reviews Nov, 2021 | Pubmed ID: 34549206
Direct Measurement of Intermolecular Mechanical Force for Nonspecific Interactions between Small Molecules.
The journal of physical chemistry letters Nov, 2021 | Pubmed ID: 34780182
Chirality transmission in macromolecular domains.
Nature communications 01, 2022 | Pubmed ID: 35013247
Dissection of nanoconfinement and proximity effects on the binding events in DNA origami nanocavity.
Nucleic acids research 01, 2022 | Pubmed ID: 35037040
Small Molecules Modulate Liquid-to-Solid Transitions in Phase-Separated Tau Condensates.
Angewandte Chemie (International ed. in English) 06, 2022 | Pubmed ID: 35320624
Single-Molecule Mechanochemical Sensing.
Accounts of chemical research 05, 2022 | Pubmed ID: 35420417
Single-molecule displacement assay reveals strong binding of polyvalent dendrimer ligands to telomeric G-quadruplex.
Analytical biochemistry 07, 2022 | Pubmed ID: 35500657
Short LNA-modified oligonucleotide probes as efficient disruptors of DNA G-quadruplexes.
Nucleic acids research Jul, 2022 | Pubmed ID: 35801856
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